prot_H-elongata_contig8152.15819.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8152.15819.1
Unique Nameprot_H-elongata_contig8152.15819.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length351
Homology
BLAST of mRNA_H-elongata_contig8152.15819.1 vs. uniprot
Match: D7G2K9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2K9_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 7.090e-56
Identity = 193/276 (69.93%), Postives = 218/276 (78.99%), Query Frame = 0
Query:    1 MGRMRRYKKFKAIDPFAKGG---GIKKGRKS-DDLDRNLPPDVKNHQAQRMDSRQD--KGKKKAKRRLPQWAQDEIKETAKRVREEHSDPQGKGQQPQPQRPVIEGKREDESMREFRRRVQGRRTQLLKESFQEHSASRKXXXXXXXXXXXXXXXXXXQGLWEEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVTS--------GEARGVDNDDTAFP--GAERIRFGEVAHAPPDLAKIPKPKGLNDQGQAKPWAR 260
            MGR+R+YKK KA+DPFAKGG    +  GRK   DLDRNLPPDVKNHQAQR+++ ++    KKK KRRLPQWA +E+KETAKRVREEH+DP GKG+QP+PQR  +EGKREDESMR+F +RV+    QLLK+ F+EHS++ KXXXXXXXXXXXXXXXXXX  LW   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            G     D+D+ A      ERIRFGEVAHAPPDLAKIPKP+G  DQGQAKPWAR
Sbjct:    1 MGRVRKYKKVKAMDPFAKGGCGGRMGMGRKGGSDLDRNLPPDVKNHQAQRLNNLEEGKDKKKKNKRRLPQWAHEELKETAKRVREEHADPGGKGRQPEPQRAAMEGKREDESMRQFNKRVREGTAQLLKDEFKEHSSTNKXXXXXXXXXXXXXXXXXXX-LWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGVLGRADDDEGAAQLLQKERIRFGEVAHAPPDLAKIPKPRGFKDQGQAKPWAR 275          
BLAST of mRNA_H-elongata_contig8152.15819.1 vs. uniprot
Match: A0A835YUV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV8_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.850e-22
Identity = 110/359 (30.64%), Postives = 155/359 (43.18%), Query Frame = 0
Query:    1 MGRMRRYKKFKAIDPFAKGGGIKKGRKSDDLDRNLPPDVKNHQAQRMDSRQDKGKKKAKRRLPQWAQDEIKETAKRVREEHSDPQ---GKGQQPQP-----QRPVIEGKREDESMREFRRRVQGRRTQLLKESFQEHSASRKXXXXXXXXXXXXXXXXXXQGLWEEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVTSGEARGVDNDDTAFPGAERIRFGEVAHAPPDLAKIPKPKGLNDQGQAKPWARGFAGTPQDEASRGIYRNVS--RMQQLGQRGAISETGEAGESPDFRKRQGRVAEGEKAQHRQMEEMRQRVQEAYTGLKKKRRAGQTQYVSSD 349
            MGR+RRYKK K +D  +K    +K     D++ NLPPD  NHQAQR+ +     K++AK+RLP+WA++E++ETAKR RE  +D Q   G    P P      +  I  KR DES+REF  RV+    + LK++  + ++S                    QGLWEE                                                  + E +G+  ++  F   E I+FGE  H PP    +PK KGL      KPW RG     + +A  G+ R             G +S                  AEG + + +Q+E +R     AY  LKK+RRAGQ Q+V+ D
Sbjct:    1 MGRVRRYKKAKNLDITSK----RKRADKKDVEHNLPPDTANHQAQRLKA-DGTLKRRAKQRLPEWAKEELRETAKRERE--ADKQLLAGAAATPLPGENDTPKVKITPKRTDESLREFNERVRKVAAEALKDNA-KRASSTVARRKKHLAEKSQKKKLQRQGLWEE---------------------------------------------HKMQVAREEQGIA-EERDFSKPEHIQFGETVHEPPRFQSMPKLKGLKPDLAEKPWLRGL----RSDAITGLKRKAGGXXXXXXXXXGVLS------------------AEGAQLKAQQLERVRTEAVAAYADLKKRRRAGQVQHVAHD 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8152.15819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2K9_ECTSI7.090e-5669.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUV8_9STRA2.850e-2230.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 133..153
NoneNo IPR availableCOILSCoilCoilcoord: 310..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8152contigH-elongata_contig8152:2893..9421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8152.15819.1mRNA_H-elongata_contig8152.15819.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8152 2893..10030 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8152.15819.1 ID=prot_H-elongata_contig8152.15819.1|Name=mRNA_H-elongata_contig8152.15819.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=351bp
MGRMRRYKKFKAIDPFAKGGGIKKGRKSDDLDRNLPPDVKNHQAQRMDSR
QDKGKKKAKRRLPQWAQDEIKETAKRVREEHSDPQGKGQQPQPQRPVIEG
KREDESMREFRRRVQGRRTQLLKESFQEHSASRKKKKRRVSRIKKRKNKL
KKQGLWEEVRRRELLDEKDDADEDGRGSSSTGADRKRATMVIGGRRSRSS
SGGGGRVTSGEARGVDNDDTAFPGAERIRFGEVAHAPPDLAKIPKPKGLN
DQGQAKPWARGFAGTPQDEASRGIYRNVSRMQQLGQRGAISETGEAGESP
DFRKRQGRVAEGEKAQHRQMEEMRQRVQEAYTGLKKKRRAGQTQYVSSDL
*
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