prot_H-elongata_contig81516.15818.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81516.15818.1
Unique Nameprot_H-elongata_contig81516.15818.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
BLAST of mRNA_H-elongata_contig81516.15818.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 7.970e-34
Identity = 62/131 (47.33%), Postives = 87/131 (66.41%), Query Frame = 0
Query:    1 GFFSRSVAAVDGLLIKTVAPSSRDVKNPIRYFSGKKKVYGLSIQAVCDRHPRFLGFSANSLDATNDSAAWLRARVASLVENLPGAYFIIGDNAYANKEHLMTPYPERNQSTSKDIYNFLLSQCRIHVKMSF 131
            G FS  VA VDGL +KT+APS +D  N I Y+SG+K  YG+++QA+C    RF   SA +  ATND AAWLR++++  V  LP  ++++GD AY   E L+TPYP +N    +D +NF LSQ R+ ++ SF
Sbjct:  196 GIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSF 326          
BLAST of mRNA_H-elongata_contig81516.15818.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.200e-21
Identity = 43/127 (33.86%), Postives = 76/127 (59.84%), Query Frame = 0
Query:    5 RSVAAVDGLLIKTVAPSSRDVKNPIRYFSGKKKVYGLSIQAVCDRHPRFLGFSANSLDATNDSAAWLRARVASLVENLPGAYFIIGDNAYANKEHLMTPYPERNQSTSKDIYNFLLSQCRIHVKMSF 131
            + V A DGL ++ + PS+++V  P  Y++G KK +G++ QAVCD   R + +  N   + ND  A+  +    L+  LP  +F++GD AY   E ++ P+P  + S S+D  N+ +SQCR+ ++ ++
Sbjct:  172 KCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTY 298          
BLAST of mRNA_H-elongata_contig81516.15818.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 2.290e-21
Identity = 42/127 (33.07%), Postives = 77/127 (60.63%), Query Frame = 0
Query:    5 RSVAAVDGLLIKTVAPSSRDVKNPIRYFSGKKKVYGLSIQAVCDRHPRFLGFSANSLDATNDSAAWLRARVASLVENLPGAYFIIGDNAYANKEHLMTPYPERNQSTSKDIYNFLLSQCRIHVKMSF 131
            + V A+DGL ++ + PS+++V  P  Y++G K  +G++ QAVCD   R + ++ +   + ND  A+  A    L+  LP  +F++GD AY   E ++ P+P  + S S+D  N+ +SQCR+ ++ ++
Sbjct:   20 KCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTY 146          
BLAST of mRNA_H-elongata_contig81516.15818.1 vs. uniprot
Match: A0A2P4XB73_9STRA (DDE Tnp4 domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XB73_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.300e-21
Identity = 47/120 (39.17%), Postives = 73/120 (60.83%), Query Frame = 0
Query:    7 VAAVDGLLIKTVAPSSRDVKNPIRYFSGKKKVYGLSIQAVCDRHPRFLGFSANSLDATNDSAAWLRARVASLVENLPGAYFIIGDNAYANKEHLMTPYPERNQSTSK-DIYNFLLSQCRI 125
            + AV+G L     P  ++V     +FSG  + YG+++QA CD   RF   + +S   T D+ A+L+ R++S+V+ LP   +++GDNAY N  HL+TP+P    ST+  D YN+ LSQ R+
Sbjct:  144 IGAVNGWLCPIRVPWRKEVAQVRSFFSGHYQRYGVNVQACCDHRSRFTAVTCSSAGGTGDAVAFLKWRLSSVVKTLPNGLYVVGDNAYTNSNHLLTPFPRPKISTAAHDSYNYHLSQWRV 263          
BLAST of mRNA_H-elongata_contig81516.15818.1 vs. uniprot
Match: A0A7S1BST2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BST2_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.620e-18
Identity = 46/136 (33.82%), Postives = 77/136 (56.62%), Query Frame = 0
Query:    1 GFFSRSVAAVDGLLIKTVAPSSRDVKNPIRYFSGKKKVYGLSIQAVCDRHPRFLGFSANSLDATNDSAAWLRARVASLVENLPGA-----YFIIGDNAYANKEHLMTPYPERNQSTSKDIYNFLLSQCRIHVKMSF 131
            G FS  + A+DGL ++   P  RDV +P  YFS +K  Y L++QA+CDR    L  S     +++DS+AW    +  ++  +        +F++ D+AY    +LM P+ +    +S+D++NF LS  RIH++ +F
Sbjct:  214 GVFSGCIGAIDGLAVRIECP--RDVMDPGSYFS-RKNFYALNVQAICDRQKNILWMSPGHQGSSHDSSAWFDTELHDILLRMKDQLSYHKFFLVRDSAYPISSYLMIPFLDPEPESSEDVFNFWLSNSRIHIECAF 346          
BLAST of mRNA_H-elongata_contig81516.15818.1 vs. uniprot
Match: A0A8J5MEL1_9STRA (DDE Tnp4 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MEL1_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.110e-16
Identity = 42/113 (37.17%), Postives = 63/113 (55.75%), Query Frame = 0
Query:    7 VAAVDGLLIKTVAPSSRDVKNPIRYFSGKKKVYGLSIQAVCDRHPRFLGFSANSLDATNDSAAWLRARVASLVENLPGAYFIIGDNAYANKEHLMTPYPERNQSTSK-DIYNF 118
            + A+ G L     P   +V     +FSG  +  G+++QA CD   RF   S +S   T D+ A+L+ R++ +V NLP   +++GDNAY N  HL+TP+     ST+  D YNF
Sbjct:    5 IGAIYGWLCPIRVPRKTEVTRVRGFFSGHYQRDGVNVQACCDHLSRFTAVSCSSPGGTGDAVAFLKWRLSLVVNNLPSGLYVVGDNAYTNSNHLLTPFLRPRISTAAHDSYNF 117          
BLAST of mRNA_H-elongata_contig81516.15818.1 vs. uniprot
Match: A0A5D6XPM3_9STRA (DDE Tnp4 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPM3_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 4.530e-16
Identity = 43/127 (33.86%), Postives = 73/127 (57.48%), Query Frame = 0
Query:    7 VAAVDGLLIKTVAP--SSRDVKNPIRYFSGKKKVYGLSIQAVCDRHPRFLGFSANSLDATNDSAAWLRARVASLVENLPGAYFIIGDNAYANKEHLMTPYPERNQSTSKDIYNFLLSQCRIHVKMSF 131
            V  +DG L +  AP  S  +   P R++SG+ + +G S+Q+VCD   RF   S     + +D  A+  + ++  VE+LP   +++ D+AY   +HL+TP+  +  +   D +NF LSQ R+ V+M+F
Sbjct:  105 VGCLDGRLCEIQAPRQSQCEGAGPRRFYSGRYRWFGASMQSVCDAECRFTYVSVLCPGSVSDLVAYEESALSVKVESLPSGVYLLADSAYVASDHLLTPFAGKALTAQVDAFNFYLSQLRMSVEMAF 231          
BLAST of mRNA_H-elongata_contig81516.15818.1 vs. uniprot
Match: A0A2P4XA88_9STRA (DDE Tnp4 domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XA88_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.240e-12
Identity = 32/67 (47.76%), Postives = 49/67 (73.13%), Query Frame = 0
Query:   66 DSAAWLRARVASLVENLPGAYFIIGDNAYANKEHLMTPYPERNQSTSK-DIYNFLLSQCRIHVKMSF 131
            D+ A+L+ R++S+V+NLP   +++GDNAY N  HL+TP+P    ST+  D YN+ LSQ RI ++M+F
Sbjct:  200 DAVAFLKWRLSSVVKNLPNGLYVVGDNAYTNSNHLLTPFPRPKISTAAHDSYNYHLSQVRIRIEMAF 266          
BLAST of mRNA_H-elongata_contig81516.15818.1 vs. uniprot
Match: W2J7X4_PHYPR (DDE Tnp4 domain-containing protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2J7X4_PHYPR)

HSP 1 Score: 63.9 bits (154), Expect = 7.190e-10
Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 0
Query:   65 NDSAAWLRARVASLVENLPGAYFIIGDNAYANKEHLMTPYP--ERNQSTSKDIYNFLLSQCRIHVKMSF 131
            NDS A+ R +++ L++ +PG YF+IGDNAY     +MTP+   + +    +D YNF +SQ RI V+M+F
Sbjct:    2 NDSYAFQRWKLSKLLKEIPGPYFVIGDNAYVQSRRVMTPFNKVQLDDRPKRDSYNFHVSQLRIRVEMAF 70          
BLAST of mRNA_H-elongata_contig81516.15818.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.580e-7
Identity = 30/101 (29.70%), Postives = 54/101 (53.47%), Query Frame = 0
Query:    5 RSVAAVDGLLIKTVAPSSRDVKNPIRYFSGKKKVYGLSIQAVCDRHPRFLGFSANSLDATNDSAAWLRARVASLVENLPGAYFIIGDNAYANKEHLMTPYP 105
            + V A+DGL ++ + PS+++V  P  Y++G KK +G++ Q VC +               ND  A+  +    L+  LP  +F++G+ AY   E ++ P+P
Sbjct:  183 KCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VCSQ---------------NDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFP 267          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81516.15818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L386_9PHAE7.970e-3447.33DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5L6B6_9PHAE2.200e-2133.86DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5KNF2_9PHAE2.290e-2133.07DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A2P4XB73_9STRA2.300e-2139.17DDE Tnp4 domain-containing protein n=1 Tax=Phytoph... [more]
A0A7S1BST2_9STRA1.620e-1833.82Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A8J5MEL1_9STRA1.110e-1637.17DDE Tnp4 domain-containing protein n=1 Tax=Phytoph... [more]
A0A5D6XPM3_9STRA4.530e-1633.86DDE Tnp4 domain-containing protein n=1 Tax=Pythium... [more]
A0A2P4XA88_9STRA5.240e-1247.76DDE Tnp4 domain-containing protein n=1 Tax=Phytoph... [more]
W2J7X4_PHYPR7.190e-1043.48DDE Tnp4 domain-containing protein n=3 Tax=Phytoph... [more]
A0A6H5JJA1_9PHAE1.580e-729.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 10..130
e-value: 1.0E-14
score: 54.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81516contigH-elongata_contig81516:620..1021 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81516.15818.1mRNA_H-elongata_contig81516.15818.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81516 620..1021 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81516.15818.1 ID=prot_H-elongata_contig81516.15818.1|Name=mRNA_H-elongata_contig81516.15818.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
GFFSRSVAAVDGLLIKTVAPSSRDVKNPIRYFSGKKKVYGLSIQAVCDRH
PRFLGFSANSLDATNDSAAWLRARVASLVENLPGAYFIIGDNAYANKEHL
MTPYPERNQSTSKDIYNFLLSQCRIHVKMSFVY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027806HARBI1_dom