prot_H-elongata_contig8143.15808.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8143.15808.1
Unique Nameprot_H-elongata_contig8143.15808.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length99
Homology
BLAST of mRNA_H-elongata_contig8143.15808.1 vs. uniprot
Match: A0A6H5L244_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L244_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.710e-25
Identity = 46/82 (56.10%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MRELASEANAVDEELYRFVSAKFCAQLHEVGLLEHPLVMEELASFEPIYNMCNNSSWVATTLERFEPLISEDCRLYKPMDHP 82
            +RE AS ANAVDE L+ F+SAKFC +L E GLL HPLV  +LA++EP+ + CN+ +W   TLERF P+  ++CRLY+P D P
Sbjct:  305 LREAASSANAVDEALHEFISAKFCERLRETGLLHHPLVSAQLATYEPLDHRCNDETWAKETLERFAPITPQECRLYEPFDKP 386          
BLAST of mRNA_H-elongata_contig8143.15808.1 vs. uniprot
Match: D7FWY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWY0_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 5.370e-24
Identity = 45/80 (56.25%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    1 MRELASEANAVDEELYRFVSAKFCAQLHEVGLLEHPLVMEELASFEPIYNMCNNSSWVATTLERFEPLISEDCRLYKPMD 80
            +R+ A  ANAVDE L+ FVSAKFC +L E GLL HPLV  ELA++EP+   CN+ +W   TLERF P++ ++CRLY+P D
Sbjct:  318 LRDAARSANAVDEALHEFVSAKFCERLRETGLLHHPLVGAELATYEPLERRCNDETWAKDTLERFAPIMPDECRLYQPFD 397          
BLAST of mRNA_H-elongata_contig8143.15808.1 vs. uniprot
Match: A0A6H5KAL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL5_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 3.170e-15
Identity = 43/126 (34.13%), Postives = 60/126 (47.62%), Query Frame = 0
Query:    1 MRELASEANAVDEELYRFVSAKFCAQLHEVGLLEHPLVMEELASFEPIYNM----------------------------------------------CNNSSWVATTLERFEPLISEDCRLYKPMD 80
            +R+ A  ANAVDE L+  VSAKFC +L E GLL HPLV+ ELA++EP+ +                                               CN+ +W   TLERF P++ ++CRLY+P +
Sbjct:  302 LRDAARSANAVDEALHELVSAKFCERLREAGLLHHPLVVAELATYEPLEHRYAIGFVLCQAFGWGEADLRVWPCMIRCSRSETPSFFALPLSVSVPRCNDETWAKDTLERFAPIMPDECRLYQPFE 427          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8143.15808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L244_9PHAE1.710e-2556.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWY0_ECTSI5.370e-2456.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAL5_9PHAE3.170e-1534.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8143contigH-elongata_contig8143:2367..2995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8143.15808.1mRNA_H-elongata_contig8143.15808.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8143 2220..4299 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8143.15808.1 ID=prot_H-elongata_contig8143.15808.1|Name=mRNA_H-elongata_contig8143.15808.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
MRELASEANAVDEELYRFVSAKFCAQLHEVGLLEHPLVMEELASFEPIYN
MCNNSSWVATTLERFEPLISEDCRLYKPMDHPQGLGRALVTVEASTQP*
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