prot_H-elongata_contig81222.15782.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81222.15782.1
Unique Nameprot_H-elongata_contig81222.15782.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length665
Homology
BLAST of mRNA_H-elongata_contig81222.15782.1 vs. uniprot
Match: D8LHY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHY9_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 3.440e-84
Identity = 264/736 (35.87%), Postives = 357/736 (48.51%), Query Frame = 0
Query:    1 EASDGPKIEKIIAILEEWAAWERGLEEEAERSDVARSIKQAADQMAPRFATNISALQTRDHKICAEKKHLTKFIDDASTMRF--------RKMPKAVHLPDDAVRLHFATKQERRLSARSDSVARAGRQTLKAWARDQTMRRSS-KDITLDQDQVSVG----CKERSASQAR--RIISTNVKIGHCWKGE----KRTFAASRRSMHLTSTPTHSFALQKTSPSRRARQAGRLTAEPLRSLER----GDMSKGTRKVVTPQHSWKTYKKSPGRFGIPVGGWFEAGEEDTITALPTT------------RSPALIDCGRASPWARSPSRETAGGILVKHSFFYGTGGRTLPDRMFSREDWTGANRSFESAWMRKFRKEIERNPDWWIKPQQ--HYPVLGMRKAG-FRGSSQGLNKREVSGQNRPATDFTATHNEGGYARGQDAQKIALWDEVRSLLATGRCGND----GGGVGGG---EVATESFERNDGLSFGDRLRCTPLSQGAWLEEDSRRERFDLLSALPGSGIEDEIDSAAKEQSTGENSKHEAHGRGYILEPETRAESDAYGRSNTKSNDACGGREGFLKRW------------------NAGVVDRNR--------EGLRSVHDSILARLRGKIDSATREEIIMRAAEDARGALARDGVKIAAPRHALEVVASRASSGLRSSIAVPESIDYDKVEATLSLIELAARAAGPDAGRQMLRALECLEKMHQRVS 665
            +A D  + + II+ILE+WAAWER LEE A+ S+     K+A +Q      + ISA    D +  A    ++K  DD ++           R +       +    L +A+++ERR +   D +ARA RQ LK WA DQT RRSS ++ TL +     G      ER+    R  R  ST+  +    KG     K  +   R+  +  S P      ++ S  R  R    +   P RS       G   +   +  +P++ W+   K P +   P    F+   E  ++  P+T             S +L+  GR S WARSPSRETAGGILVKH FFYG+  +  P R  +  +   A+ SFES WMR+FR+E++RNP+WW+   +  H        AG   G ++G + R      RP      TH  GG   G  +Q   LW+EVR LLA GR   D    G   G G   E       R D LSFGDRLR TPLSQGAWL  +         SA   S       ++A++ +       E H     L      +  A G    +  D+  GR   L R                    AG  DR+R          L+S+H + LA+LRG+ID  TREE+++RAAE+ARGALARD  +  +PR A   V  R S   R   + P++IDYD VEATLSLIELA RAAGPDAG+QML+ALE L+K+HQRVS
Sbjct:   67 DADDEDQRDAIISILEDWAAWERNLEEGADVSET----KKADEQAVVTGVSGISAASLVDTQNDARTSRVSKPNDDPASAAHSASGPSSKRGLRATFEAGNPNQLLLYASRRERRRAEIHDPIARARRQALKVWAADQTRRRSSAEESTLSERLKQQGRGSFSYERATVSVRSSRRSSTDATVDRNRKGGGGPLKNEWFRRRKPPYRASAP------REISAQRHVRNIAEIPPGPQRSTPTVPAAGLSPQEAGRKSSPRYPWRANMKEPEK--RPRRSAFDLLREGDVSMAPSTPRVPTTVLSSPSSSSSLVVAGRGSAWARSPSRETAGGILVKHCFFYGSSDKATPRRAAA--EAATASTSFESQWMRQFREEVQRNPNWWLSSDRFVHGRACASPAAGNVPGGAKGASGRSA----RPPFPTALTHRGGG---GMASQTTDLWNEVRLLLAAGRQNEDRHTGGSRRGPGHDHEKGDLKAARLDILSFGDRLRYTPLSQGAWLVGEGAT----ATSAATTSS------ASAEKSARNAMLSEEVH---VALATRDMVDVAAAGTDVEERQDSKAGRSDALSRVPSQSAADEIVSPIGNVRAEAGHDDRSRAVRGTSGCHDLQSIHAATLAKLRGEIDPFTREELVLRAAEEARGALARDRARNTSPRRASAGV-FRPSPKARKRDSTPDAIDYDTVEATLSLIELATRAAGPDAGKQMLQALEDLDKIHQRVS 767          
BLAST of mRNA_H-elongata_contig81222.15782.1 vs. uniprot
Match: A0A6H5L713_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L713_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 7.150e-80
Identity = 270/733 (36.83%), Postives = 360/733 (49.11%), Query Frame = 0
Query:    1 EASDGPKIEKIIAILEEWAAWERGLEEEAERSDVARSIKQAADQMAPRFATNISALQTRDHKICAEKKHLTKFIDD-ASTMRFRKMP------KAVHLPDDAVRLH-FATKQERRLSARSDSVARAGRQTLKAWARDQTMRRSSKDI-----TLDQDQVSVGCKERSASQAR--RIISTNVKIGHCWKGE----KRTFAASRRSMHLTSTPTHSFALQKTSPSRRARQAGRLTAEPLRSLE----RGDMSKGTRKVVTPQHSWKTYKKSPGRFGIPVGGWFEAGEEDTITALPTT------------RSPALIDCGRASPWARSPSRETAGGILVKHSFFYGTGGRTLPDRMFSREDWTGANRSFESAWMRKFRKEIERNPDWWIKPQQHYPVLGMRKAGFRGSSQGLNKREVSGQN-RPATDFTATHNEGGYARGQDAQKIALWDEVRSLLATGRCGND---GGGVGGGEVATESFE----RNDGLSFGDRLRCTPLSQGAWL-----------------EEDSRRERFDLLSALPGSGIEDEIDSAAKEQSTGENSKHEAHGRGYILEPETRAESDAYGRSNTK-SNDACGGREGFLKRWNAGVVDRNR-------EGLRSVHDSILARLRGKIDSATREEIIMRAAEDARGALARDGVKIAAPRHALEVVASRASSGLRSSIAVPESIDYDKVEATLSLIELAARAAGPDAGRQMLRALECLEKMHQRVS 665
            +A +  + + II+ILE+WAAWER LEE A   DV  + K A ++      + ISA    D    A+   ++K IDD AS       P      +A    ++  +L  + +++ERR + R D +ARA R+ LK WA DQT RRSS +       L Q        ER+   AR  R  ST+  +    KG     K  +   R+  + TS P      ++ S  R  R    +     RS       G +    RK  +P+  W+   K P +   P    F+  +E  ++  P+T             S +L+  GR S WARSPSRETAGGILVKH FFYG+  +  P R  +  +   A+ SFES WMR+FRKE++RNP+WW+   +   V G   A     +     +  SG++ RP      TH  GG   G  ++   LW+EVR LLA GR   +   GG   G E   E  +    R D LSFGDRLR TPLSQGAWL                  E S R               D +D AA      E    +A GR            DA  R  +K + D      G + R  AG  DR++         L+++H + LA+LRG+ID  TREE+++RAAE+ARGALARD  +  +PR A   V  R S   R   +  ESIDYD VEATLSLIELA RAAGPDAG+QML+ALE L+K+HQRVS
Sbjct:   67 DADNEDQRDAIISILEDWAAWERNLEEGA---DVGETRK-ADEEAVVTGVSGISAASLVDTHNDAKTSCVSKPIDDPASEAHSATGPPSKQGLRATFEAENTNKLLLYTSRRERRRAERHDPIARARREALKVWAADQTRRRSSAEEGKLSERLKQTGRGSFSDERATVSARSSRRSSTDATVDRNRKGGGGLLKSEWFRRRKPPYRTSAP------REISTQRHVRNIAEIPLGTQRSSPIAPAAGPLQDVARKS-SPRFPWRANMKEPEK--RPRRSAFDLLQEGDVSTAPSTPRVPTTVLSSPSSSSSLVVAGRGSAWARSPSRETAGGILVKHCFFYGSSDKATPRRAAA--EAATASTSFESQWMRQFRKEVQRNPNWWLGSDRF--VHGRTYASPAAENVPGGAKGASGRSARPLFPTALTHRGGG---GMASRTTDLWNEVRLLLAAGRRSGERHAGGSKRGREDDHEEGDPKAARLDILSFGDRLRYTPLSQGAWLVGEGATATTATTTSSASTEKSVRNAMLSEEVHVAVATRDMVDVAAARADVEERRDSKA-GR-----------PDALNRVPSKPAADESVSPTGNV-RAEAGHDDRSKAVRTSGCHDLQTIHAATLAKLRGEIDPFTREELVLRAAEEARGALARDRARNTSPRRASAGV-FRPSPKARKRDSTLESIDYDTVEATLSLIELATRAAGPDAGKQMLQALEDLDKIHQRVS 765          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81222.15782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHY9_ECTSI3.440e-8435.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L713_9PHAE7.150e-8036.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81222contigH-elongata_contig81222:572..2566 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81222.15782.1mRNA_H-elongata_contig81222.15782.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81222 572..2566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81222.15782.1 ID=prot_H-elongata_contig81222.15782.1|Name=mRNA_H-elongata_contig81222.15782.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=665bp
EASDGPKIEKIIAILEEWAAWERGLEEEAERSDVARSIKQAADQMAPRFA
TNISALQTRDHKICAEKKHLTKFIDDASTMRFRKMPKAVHLPDDAVRLHF
ATKQERRLSARSDSVARAGRQTLKAWARDQTMRRSSKDITLDQDQVSVGC
KERSASQARRIISTNVKIGHCWKGEKRTFAASRRSMHLTSTPTHSFALQK
TSPSRRARQAGRLTAEPLRSLERGDMSKGTRKVVTPQHSWKTYKKSPGRF
GIPVGGWFEAGEEDTITALPTTRSPALIDCGRASPWARSPSRETAGGILV
KHSFFYGTGGRTLPDRMFSREDWTGANRSFESAWMRKFRKEIERNPDWWI
KPQQHYPVLGMRKAGFRGSSQGLNKREVSGQNRPATDFTATHNEGGYARG
QDAQKIALWDEVRSLLATGRCGNDGGGVGGGEVATESFERNDGLSFGDRL
RCTPLSQGAWLEEDSRRERFDLLSALPGSGIEDEIDSAAKEQSTGENSKH
EAHGRGYILEPETRAESDAYGRSNTKSNDACGGREGFLKRWNAGVVDRNR
EGLRSVHDSILARLRGKIDSATREEIIMRAAEDARGALARDGVKIAAPRH
ALEVVASRASSGLRSSIAVPESIDYDKVEATLSLIELAARAAGPDAGRQM
LRALECLEKMHQRVS
back to top