prot_H-elongata_contig81070.15762.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig81070.15762.1
Unique Name	prot_H-elongata_contig81070.15762.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	187

Homology

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BLAST of mRNA_H-elongata_contig81070.15762.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 1.600e-88
Identity = 140/186 (75.27%), Postives = 154/186 (82.80%), Query Frame = 0

Query:    1 DLWTCKVSGRKYLDVRMFYVDNNFVLRHALIAVKHYAPSAAAQETGKASEILFTIFKSVLAEFGIKLSDLAGRTTDSGPDVKAMSANFLLLLYKIYWDWCDSHLCDKAAENAFGTSADPQKSKNKEAHKVIQLVIKATAKVNQSTTFKQKFDVTQLEMLNATLKITKHTPQRWLSLVRVMERIIRL 186
            DLWTCKVSGRKYL V +FYVD+NF LRHALI+VKHYAPS   Q T KASEILFTIF++ LAE+GIKLSDLAG TTDSG DVKAM  N LL L+KI+WDWCD HL DK+AEN FGTSADPQ+SKNK A  VI+LVIK  AK+NQST  KQKF+   LEML+  LKITKH PQRWLSLV VMERIIRL
Sbjct:  226 DLWTCKVSGRKYLGVHVFYVDSNFSLRHALISVKHYAPSTEIQGTEKASEILFTIFRATLAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKINQSTIVKQKFEKVTLEMLDEILKITKHAPQRWLSLVLVMERIIRL 411

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BLAST of mRNA_H-elongata_contig81070.15762.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 6.690e-81
Identity = 132/186 (70.97%), Postives = 148/186 (79.57%), Query Frame = 0

Query:    1 DLWTCKVSGRKYLDVRMFYVDNNFVLRHALIAVKHYAPSAAAQETGKASEILFTIFKSVLAEFGIKLSDLAGRTTDSGPDVKAMSANFLLLLYKIYWDWCDSHLCDKAAENAFGTSADPQKSKNKEAHKVIQLVIKATAKVNQSTTFKQKFDVTQLEMLNATLKITKHTPQRWLSLVRVMERIIRL 186
            DLW CK++G KY+DV + YV++N  L+H L+AVKHYAPSAA Q TGKASEILF +F SVL EFG+K+SDLAG TTDSG DVKAM  NFLL  +K  WDWC  HL D+AAE AFGTSADPQK KNK+A  V+QLVIKA AKVNQS  FKQKFD  QL+M    LKI KH PQRWLSLVRVMERIIRL
Sbjct:  245 DLWQCKITGLKYIDVHVCYVNSNLELQHELLAVKHYAPSAAVQATGKASEILFNVFNSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRL 430

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BLAST of mRNA_H-elongata_contig81070.15762.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 8.960e-68
Identity = 112/154 (72.73%), Postives = 129/154 (83.77%), Query Frame = 0

Query:   33 VKHYAPSAAAQETGKASEILFTIFKSVLAEFGIKLSDLAGRTTDSGPDVKAMSANFLLLLYKIYWDWCDSHLCDKAAENAFGTSADPQKSKNKEAHKVIQLVIKATAKVNQSTTFKQKFDVTQLEMLNATLKITKHTPQRWLSLVRVMERIIRL 186
            VKHYAPSAA Q + KAS +LFT+F+S+LAEFGIKLSDLAG TTDSG D+KAM  NFLL  + +YWDWC  HL D+AAE AFGTSADPQKSKNK+A +V+ L+IKA AKVNQS  FKQKFD  Q+EML  TLKI++H PQRWLSLVRV+ERIIRL
Sbjct:   82 VKHYAPSAAVQASEKASGVLFTVFRSLLAEFGIKLSDLAGGTTDSGSDIKAMCTNFLLAQHNVYWDWCVCHLADRAAEAAFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAQMEMLGETLKISRHAPQRWLSLVRVIERIIRL 235

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BLAST of mRNA_H-elongata_contig81070.15762.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 2.520e-50
Identity = 92/186 (49.46%), Postives = 123/186 (66.13%), Query Frame = 0

Query:    1 DLWTCKVSGRKYLDVRMFYVDNNFVLRHALIAVKHYAPSAAAQETGKASEILFTIFKSVLAEFGIKLSDLAGRTTDSGPDVKAMSANFLLLLYKIYWDWCDSHLCDKAAENAFGTSADPQKSKNKEAHKVIQLVIKATAKVNQSTTFKQKFDVTQLEMLNATLKITKHTPQRWLSLVRVMERIIRL 186
            D+W  K SGRK+L V +FYV  NF L+  L+++K Y PS  A    KA+E+L  I +++L EFG + SDLA  TTDSG DVK++S N L   Y + W+WC  HL  KAAE+AFGT  DPQKSKN EAH +++ +I     +++S     KF+  Q+++L   LKI    PQRWL+LVR MER+IRL
Sbjct:   18 DIWADKPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRL 203

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BLAST of mRNA_H-elongata_contig81070.15762.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.690e-47
Identity = 91/186 (48.92%), Postives = 119/186 (63.98%), Query Frame = 0

Query:    1 DLWTCKVSGRKYLDVRMFYVDNNFVLRHALIAVKHYAPSAAAQETGKASEILFTIFKSVLAEFGIKLSDLAGRTTDSGPDVKAMSANFLLLLYKIYWDWCDSHLCDKAAENAFGTSADPQKSKNKEAHKVIQLVIKATAKVNQSTTFKQKFDVTQLEMLNATLKITKHTPQRWLSLVRVMERIIRL 186
            D+WT K SGRK+L V +FYV  NF L+ ALI+ K             A+E+L  I +SVL EFG++ SDLA  TTDSG DVK++S N L   Y + W+WC  HL  KAAE+AFGT  DPQKSKN E  K+++ VI     +++S     KF+  Q+++L   LKI    PQRWL+LVR +ER+IRL
Sbjct:  188 DIWTDKPSGRKFLGVHLFYVTANFELKQALISAK-------------AAEVLLKILESVLHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKMLKNVIGMVGTLHKSPNLTAKFEDVQVDLLGEILKIPNQAPQRWLTLVRTLERVIRL 360

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BLAST of mRNA_H-elongata_contig81070.15762.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 3.010e-41
Identity = 87/186 (46.77%), Postives = 117/186 (62.90%), Query Frame = 0

Query:    1 DLWTCKVSGRKYLDVRMFYVDNNFVLRHALIAVKHYAPSAAAQETGKASEILFTIFKSVLAEFGIKLSDLAGRTTDSGPDVKAMSANFLLLLYKIYWDWCDSHLCDKAAENAFGTSADPQKSKNKEAHKVIQLVIKATAKVNQSTTFKQKFDVTQLEMLNATLKITKHTPQRWLSLVRVMERIIRL 186
            D+W  K SGRK+L V +FYV  NF L+  L+       S A  E  KA+E+L  I +++L EFG++ SDLA  TTDSG DVK++S N L   Y + W+WC  HL  KAAE+AFGT  DPQ SKN EA  +++ +I     +++S     KF+  Q+++L   L I    PQRWL+LVR MER+IRL
Sbjct:   18 DIWADKPSGRKFLGVHVFYVTANFELKQTLL-------SDALGEV-KAAEVLLEILEAILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSN-LTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRL 194

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BLAST of mRNA_H-elongata_contig81070.15762.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 3.660e-41
Identity = 79/154 (51.30%), Postives = 102/154 (66.23%), Query Frame = 0

Query:   33 VKHYAPSAAAQETGKASEILFTIFKSVLAEFGIKLSDLAGRTTDSGPDVKAMSANFLLLLYKIYWDWCDSHLCDKAAENAFGTSADPQKSKNKEAHKVIQLVIKATAKVNQSTTFKQKFDVTQLEMLNATLKITKHTPQRWLSLVRVMERIIRL 186
            +K Y+PS  A     ASE+L  IFKS+L EFG++ SDLA  TTDSG DVK+ S N L   Y + W+WC  HL  KAAE+ FGT  DPQKSKN EA  +++ VI     +N+S+ FK KF+  Q+++L   LKI    PQRWL+ VR +ER+IRL
Sbjct:   10 IKRYSPSQDALGEAAASEVLLEIFKSILREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRL 163

[Close]

BLAST of mRNA_H-elongata_contig81070.15762.1 vs. uniprot
Match: A0A6H5JN28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN28_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 1.670e-36
Identity = 68/117 (58.12%), Postives = 86/117 (73.50%), Query Frame = 0

Query:    1 DLWTCKVSGRKYLDVRMFYVDNNFVLRHALIAVKHYAPSAAAQETGKASEILFTIFKSVLAEFGIKLSDLAGRTTDSGPDVKAMSANFLLLLYKIYWDWCDSHLCDKAAENAFGTSA 117
            DLW CK++G KY+D  + YV++NF L++AL++VKHYAPSAA Q T KASEILF +FKSVL EFG+K+SDLAG TTDSG DVKAM  NFLL  +K+  +    HL    AE  +  +A
Sbjct:   18 DLWQCKITGLKYIDGHVCYVNSNFELQYALLSVKHYAPSAAVQVTDKASEILFIVFKSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKVSQEIERYHLLYITAEEGYERAA 134

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BLAST of mRNA_H-elongata_contig81070.15762.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 2.840e-34
Identity = 66/136 (48.53%), Postives = 92/136 (67.65%), Query Frame = 0

Query:   51 ILFTIFKSVLAEFGIKLSDLAGRTTDSGPDVKAMSANFLLLLYKIYWDWCDSHLCDKAAENAFGTSADPQKSKNKEAHKVIQLVIKATAKVNQSTTFKQKFDVTQLEMLNATLKITKHTPQRWLSLVRVMERIIRL 186
            +L  I K++L EFG++ SDLA  T DSG DVK++S N L   + + W+WC  HL  KAAE+ FGT  DPQKSKN EA  +++ +I     +++S+ FK KFD  Q+++L   LKI    P+RWL+LVR +ER+IRL
Sbjct:   79 VLLEIVKAILHEFGLRTSDLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRL 214

[Close]

BLAST of mRNA_H-elongata_contig81070.15762.1 vs. uniprot
Match: A0A6H5JTT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT2_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 8.080e-31
Identity = 69/158 (43.67%), Postives = 96/158 (60.76%), Query Frame = 0

Query:   29 ALIAVKHYAPSAAAQETGKASEILFTIFKSVLAEFGIKLSDLAGRTTDSGPDVKAMSANFLLLLYKIYWDWCDSHLCDKAAENAFGTSADPQKSKNKEAHKVIQLVIKATAKVNQSTTFKQKFDVTQLEMLNATLKITKHTPQRWLSLVRVMERIIRL 186
            A   +K Y PS  A    KASE+L  I  ++L EFG++ SDLA  TTDSG DVK++S N L   + + W+ C  HL  KAAE+ FGT  DPQKSKN +A  +++ +I     +++S+ FK KF   Q+++           PQRWL+LV  +ER+IRL
Sbjct:   14 AFAQIKRYQPSQDAVGEAKASEVLLEIVNAILHEFGLRPSDLASGTTDSGLDVKSVSVNGLHPQFGVLWNCCFYHLMVKAAEDGFGTHVDPQKSKNPKARDMLKKLINLVGTLHRSSNFKAKFGDLQVDVWGEVFP--NQAPQRWLTLVPTLERVIRL 169

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig81070.15762.1 vs. uniprot

BLAST of mRNA_H-elongata_contig81070.15762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18


Match Name	E-value	Identity	Description
A0A6H5JYQ2_9PHAE	1.600e-88	75.27	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L1G0_9PHAE	6.690e-81	70.97	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KZ46_9PHAE	8.960e-68	72.73	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JB08_9PHAE	2.520e-50	49.46	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KS21_9PHAE	1.690e-47	48.92	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JZ66_9PHAE	3.010e-41	46.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KEE6_9PHAE	3.660e-41	51.30	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JN28_9PHAE	1.670e-36	58.12	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L8D8_9PHAE	2.840e-34	48.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JTT2_9PHAE	8.080e-31	43.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..185

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig81070	contig	H-elongata_contig81070:1891..2818 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig81070.15762.1	mRNA_H-elongata_contig81070.15762.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig81070 1891..2818 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig81070.15762.1 ID=prot_H-elongata_contig81070.15762.1|Name=mRNA_H-elongata_contig81070.15762.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp
DLWTCKVSGRKYLDVRMFYVDNNFVLRHALIAVKHYAPSAAAQETGKASE
ILFTIFKSVLAEFGIKLSDLAGRTTDSGPDVKAMSANFLLLLYKIYWDWC
DSHLCDKAAENAFGTSADPQKSKNKEAHKVIQLVIKATAKVNQSTTFKQK
FDVTQLEMLNATLKITKHTPQRWLSLVRVMERIIRL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf