prot_H-elongata_contig80807.15739.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80807.15739.1
Unique Nameprot_H-elongata_contig80807.15739.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length515
Homology
BLAST of mRNA_H-elongata_contig80807.15739.1 vs. uniprot
Match: A0A6H5KC01_9PHAE (SUZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC01_9PHAE)

HSP 1 Score: 281 bits (720), Expect = 3.480e-81
Identity = 255/575 (44.35%), Postives = 299/575 (52.00%), Query Frame = 0
Query:    1 EYVLKLEDELVAFVNSAEDPKPLLLVLPPRSSYQRHIAYRLSARFRLQKATPGQEKEALAAAGTEDNEGIKKTLIAAAN-----------GASSNSTKEQRPTVLARVADTTLPPVLLADLDAEAKKKEALEAVSAATVLAAAGNRGAPVKLMRRSPGGARATNPQQXXXXXGAEKQVKTVEDREREYLEVRARIFGTKSPPL-TSXXXXXXXXXXXXXXXXXXXXXLTSGI-NVGAPSAAAFAAAGEVTAEAGLLETSA--------------------------------ASIEGGSSTG----SAPEGSDAAKDKIVDVSAAVSVAVAVNGQKNTTPSRKV-----------AANLTPRSTGGESNRKFFATNAAAAAVGMTTPRSATRFSTTSPGSGKRSDKEGKQAGGFITSQGPDGTAGFNRGRGKPFPSPRKNGERRLGSIGVESVARIQGSEGXXXXXXXXXXXXXXXXXXXXXXRGMXXXGSRKAPVNAGEWKGQRGVQRNRMAEKSDPDFVRNYDNYRPSFAPFRQLADPGGTGVGXXXXXXXXXXXXGHQPHPQQPSPRMMHQH 515
            +YVLKLE ELVAFV + EDPKP  LVLPPRSSYQR IAYRL+ARF+LQKA   QE+EA+ AAG +       T I  A+                    Q+ T   RVAD+ +P VLL+ LDAEAK++EA EAV+ A  +AA G++GAP+KLMRR+PG  RA NP Q     G EK VKTVE REREY E RARIFGTKSPPL T   XXXXXXXXX          +   + +  APSA A  A                                               A   GG + G    +A  G  A      D  AA +++   NG +                    A  T   T G+ N    A   AA      T  S     T +  +GKR+D+E KQAGG +TSQGPDGT GF  GRGKP P           + G E    ++   G         X  XX           XX GSR+  VNAGEWKGQRG+QRNRMAEKSDPDFVRNYD+YRPSFAP+RQLADPGG G G   XXXXXXXXX  Q    QPSPR++ QH
Sbjct:  106 DYVLKLEGELVAFVTTKEDPKPPHLVLPPRSSYQRLIAYRLAARFKLQKANAAQEREAIVAAGMDPA-----TTIGVASPPXXXXXXXXXXXXXXXXXAQKVTAFVRVADSAVPAVLLSALDAEAKRREAAEAVATAMAVAATGSKGAPIKLMRRNPGDPRAPNPHQGQGNGGLEKHVKTVEVREREYAEARARIFGTKSPPLPTPGPXXXXXXXXXTPDGGASSPSVVEAVPDAAAPSAEAVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPGGGKAKGKTLNNAERGVAAGAGAKADRPAAAALS---NGDRXXXXXXXXXXXXXXXXXXGVATKTASPTKGKGNG--VAGEGAAVXXXXXTGSSTPSGKTKAGAAGKRTDREAKQAGGAVTSQGPDGTMGFGSGRGKPVPGXXXXXXXXXAAAGREGERGVREEGGAGAAEGPVSXGAXX----------XXXRGSRRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDHYRPSFAPYRQLADPGGGGGGGRGXXXXXXXXXXXQQ--PQPSPRLLQQH 658          
BLAST of mRNA_H-elongata_contig80807.15739.1 vs. uniprot
Match: D8LM72_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM72_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 4.120e-64
Identity = 201/496 (40.52%), Postives = 233/496 (46.98%), Query Frame = 0
Query:    1 EYVLKLEDELVAFVNSAEDPKPLLLVLPPRSSYQRHIAYRLSARFRLQKATPGQEKEALAAAGTEDNEGIKKTLIAAAN----------GASSNSTKEQRPTVLARVADTTLPPVLLADLDAEAKKKEALEAVSAATVLAAAGNRGAPVKLMRRSPGGARATNPQQXXXXXGAEKQVKTVEDREREYLEVRARIFGTKSPPLTSXXXXXXXXXXXXXXXXXXXXXLTSGINVGAPSAAAFAAAGEVTAEAGLLETSAASIEGGSSTGSAPEGSDAAKDKIVDVSAAVSVAVAVNGQKNTTPSRKVAANLTPRSTGGESNRKFFATNAAAAAVGMTTPRSATRFSTTSPGSGKRSDKEGKQAGGFITSQGPDGTAGFNRGRGKPFPSPRKNGERRLGSIGVESVARIQGSEGXXXXXXXXXXXXXXXXXXXXXXRGMXXXGS--RKAPVNAGEWKGQRGVQRNRMAEKSDPDFVRNYDNYRPSFAPFRQLADPGGTG 484
            +YVLKLE ELVAFV + E+PKP  LVLPPRSSYQR IAYRL+ARF+LQKA   QE+EA+ AAG +       T I  A+                   Q+ T   RVAD+ +P VLL+ LDAEAK++EA EAV+ AT +AA G++GAP+KLMRRSPG  RA NP Q     G EKQ                    T SP                                                              G   G A EG                                 AA +                   AAA G +TP   T+       +GKR+D+E KQAGG +TSQGPDGT GF  GRGKP P     G       G     + QGS+G         XXXXXX      X   XXX    R+  VNAGEWKGQRG+QRNRMAEKSDPDFVRNYDNYRPSFAP+RQLADPGG G
Sbjct:  396 DYVLKLEGELVAFVTNMEEPKPPHLVLPPRSSYQRLIAYRLAARFKLQKANAAQEREAIVAAGMDPA-----TTIGVASPPXXXXXXXXXXXXXXXXXQKVTAFVRVADSAVPAVLLSALDAEAKRREAAEAVATATAVAATGSKGAPIKLMRRSPGDPRAPNPHQGQGNGGVEKQ--------------------TASPTR------------------------------------------------------------GKGNGVAGEG---------------------------------AATV-------------------AAATGSSTPSGKTKAGA----AGKRTDREAKQAGGAVTSQGPDGTMGFGSGRGKPVPG----GGXXXXXGGRAGGLQQQGSDGPDRGDYGRGXXXXXXGPGGRMXXXXXXXXXXXRRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGGRG 746          
BLAST of mRNA_H-elongata_contig80807.15739.1 vs. uniprot
Match: A0A835ZFV9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFV9_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 6.720e-6
Identity = 61/158 (38.61%), Postives = 75/158 (47.47%), Query Frame = 0
Query:  349 KQAGGFITSQGPDGTAGFNRGRGKPF---PSPRKNGERRLGSIGVESVARIQGS--------------------EGXXXXXXXXXXXXXXXXXXXXXXRGMXXXGS----RKAPVNAGEWKGQRGVQRNRMAEK-SDPDFVRNYDNYRPSFAPFRQLA 478
            KQA G   S GPDG+ GF  GRGKP    P P ++G   +G +   S + + G                     +  XXXXXXXXXX            G    GS    RKA V+AG W     V+  R  +  SDPDF RNY+ YRPSFAP+R+ A
Sbjct:    7 KQAAGVRQSNGPDGSVGFGAGRGKPASPSPPPIESGNGEIGGLQGASQSSLSGGAVPLKIVSALELAAVGQEREQLQXXXXXXXXXXQFMGSVEGYGSPGDFRRGSTGSERKAVVDAGLWLKDGKVKARRRGDNPSDPDFQRNYEVYRPSFAPYRETA 164          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80807.15739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KC01_9PHAE3.480e-8144.35SUZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LM72_ECTSI4.120e-6440.52R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZFV9_9STRA6.720e-638.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036867R3H domain superfamilyGENE3D3.30.1370.50coord: 1..125
e-value: 5.2E-6
score: 28.0
IPR036867R3H domain superfamilySUPERFAMILY82708R3H domaincoord: 2..56
IPR024771SUZ domainPFAMPF12752SUZcoord: 138..188
e-value: 3.2E-11
score: 43.8
IPR024771SUZ domainPROSITEPS51673SUZcoord: 101..189
score: 10.615
IPR001374R3H domainPFAMPF01424R3Hcoord: 3..55
e-value: 4.1E-5
score: 23.5
NoneNo IPR availablePANTHERPTHR15672CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEINcoord: 3..508
NoneNo IPR availablePANTHERPTHR15672:SF8PROTEIN ENCOREcoord: 3..508

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80807contigH-elongata_contig80807:65..2499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80807.15739.1mRNA_H-elongata_contig80807.15739.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80807 65..2499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80807.15739.1 ID=prot_H-elongata_contig80807.15739.1|Name=mRNA_H-elongata_contig80807.15739.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=515bp
EYVLKLEDELVAFVNSAEDPKPLLLVLPPRSSYQRHIAYRLSARFRLQKA
TPGQEKEALAAAGTEDNEGIKKTLIAAANGASSNSTKEQRPTVLARVADT
TLPPVLLADLDAEAKKKEALEAVSAATVLAAAGNRGAPVKLMRRSPGGAR
ATNPQQEKGGGGAEKQVKTVEDREREYLEVRARIFGTKSPPLTSPPSTSP
PGSASPIPAAKMTAALTSGINVGAPSAAAFAAAGEVTAEAGLLETSAASI
EGGSSTGSAPEGSDAAKDKIVDVSAAVSVAVAVNGQKNTTPSRKVAANLT
PRSTGGESNRKFFATNAAAAAVGMTTPRSATRFSTTSPGSGKRSDKEGKQ
AGGFITSQGPDGTAGFNRGRGKPFPSPRKNGERRLGSIGVESVARIQGSE
GSDRGGGGGDSGRGAAGGRGSRGRGMGGRGSRKAPVNAGEWKGQRGVQRN
RMAEKSDPDFVRNYDNYRPSFAPFRQLADPGGTGVGFGVGGGRGGIGRGH
QPHPQQPSPRMMHQH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036867R3H_dom_sf
IPR024771SUZ
IPR001374R3H_dom