prot_H-elongata_contig80779.15735.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig80779.15735.1
Unique Name	prot_H-elongata_contig80779.15735.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	189

Homology

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BLAST of mRNA_H-elongata_contig80779.15735.1 vs. uniprot
Match: D8LIH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIH2_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 7.520e-118
Identity = 169/187 (90.37%), Postives = 180/187 (96.26%), Query Frame = 0

Query:    1 HPTQALLVLGFSIGVFGLYEMPDCTAVHTLSVGQSGIGTCDVNRTGDWLAFGCSRLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDDHKVKLWSTSSGFCFVTFSEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTMVTPQPAQLTSLALDPSGDLVVAGGMDPFEV 187
            H  ++LLVLGFS GVFGLYEMPDCTA+HTLSVGQ+GIGTCDV+ TGDWLAFGC+RLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDD KVKLWST+SGFCFVTF+EHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRT+VTPQPAQLTSLALD SG++VVAG MDPFEV
Sbjct:  323 HAKRSLLVLGFSSGVFGLYEMPDCTAIHTLSVGQAGIGTCDVSTTGDWLAFGCARLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDDSKVKLWSTTSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 509

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BLAST of mRNA_H-elongata_contig80779.15735.1 vs. uniprot
Match: A0A6H5LCN5_9PHAE (Utp12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCN5_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 1.480e-115
Identity = 170/187 (90.91%), Postives = 180/187 (96.26%), Query Frame = 0

Query:    1 HPTQALLVLGFSIGVFGLYEMPDCTAVHTLSVGQSGIGTCDVNRTGDWLAFGCSRLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDDHKVKLWSTSSGFCFVTFSEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTMVTPQPAQLTSLALDPSGDLVVAGGMDPFEV 187
            H  ++LLVLGFS GVFGLYEMPDCTA+HTLSVGQ+GIGTCDV+ TGDWLAFGC+RLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDD KVKLWSTSSGFCFVTF+EHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRT+VTPQPAQLTSLALD SG++VVAG MDPFEV
Sbjct:  317 HAKRSLLVLGFSSGVFGLYEMPDCTAIHTLSVGQAGIGTCDVSTTGDWLAFGCARLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDDSKVKLWSTSSGFCFVTFTEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTLVTPQPAQLTSLALDGSGEVVVAGAMDPFEV 503

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BLAST of mRNA_H-elongata_contig80779.15735.1 vs. uniprot
Match: W7T6B9_9STRA (Small nucleolar ribonucleoprotein complex subunit (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6B9_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.500e-80
Identity = 123/186 (66.13%), Postives = 145/186 (77.96%), Query Frame = 0

Query:    2 PTQALLVLGFSIGVFGLYEMPDCTAVHTLSVGQSGIGTCDVNRTGDWLAFGCSRLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDDHKVKLWSTSSGFCFVTFSEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTMVTPQPAQLTSLALDPSGDLVVAGGMDPFEV 187
            P  ALLV+GFS GVFGLY++P    VHTLSV    IGT  +N TG+WLA GC+ LGQLLVWEWQSETYVLKQQGH   +N  A+   G V ATGG+D KVKLWST+SGF FVTF+ H+APVTA+ F  +  AV+SASLDGTVRAHDL+RY+NFRT+ TP P QL SLA+DPSG++V AG  +PFEV
Sbjct:  314 PGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFEV 499

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BLAST of mRNA_H-elongata_contig80779.15735.1 vs. uniprot
Match: A0A812ZN46_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZN46_9DINO)

HSP 1 Score: 246 bits (628), Expect = 8.580e-79
Identity = 114/187 (60.96%), Postives = 139/187 (74.33%), Query Frame = 0

Query:    1 HPTQALLVLGFSIGVFGLYEMPDCTAVHTLSVGQSGIGTCDVNRTGDWLAFGCSRLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDDHKVKLWSTSSGFCFVTFSEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTMVTPQPAQLTSLALDPSGDLVVAGGMDPFEV 187
            H    ++V+GFS G+FGLY +P+C+ +HTLS+    I T D+N +G+WLAFG   LGQLLVWEWQSETY+LKQQGH Y +N  A+   G V ATG DD KVKLWST SGFCFVTFS+H A VTA+ F     AV+SAS DGTVRA DLVRY+NFRTM TP P Q  SLA DP G++V AG ++PF++
Sbjct:   95 HTKTNMVVVGFSSGIFGLYSLPECSNLHTLSISSHRIQTVDINSSGEWLAFGSRALGQLLVWEWQSETYILKQQGHFYDINTLAYSPDGQVVATGADDGKVKLWSTRSGFCFVTFSQHTAAVTALAFVGKGVAVLSASSDGTVRAFDLVRYRNFRTMTTPSPVQFMSLAADPGGEIVCAGCLEPFDI 281

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BLAST of mRNA_H-elongata_contig80779.15735.1 vs. uniprot
Match: A0A2P4WX09_9STRA (Periodic tryptophan protein 2 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WX09_9STRA)

HSP 1 Score: 251 bits (642), Expect = 1.690e-78
Identity = 119/187 (63.64%), Postives = 142/187 (75.94%), Query Frame = 0

Query:    1 HPTQALLVLGFSIGVFGLYEMPDCTAVHTLSVGQSGIGTCDVNRTGDWLAFGCSRLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDDHKVKLWSTSSGFCFVTFSEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTMVTPQPAQLTSLALDPSGDLVVAGGMDPFEV 187
            H +  +LV+GF  G FGLYE+P    +HTLSV Q+ + T  VN TG+WLAF   +LGQLLVWEW+SETYVLKQQGH + LN A++   G + ATG DD K+KLW T+SGFC+VTF+EH APVTAV+F P+  AVVSASLDGTVRA DL RYKNFR + TP+P Q  SLALDPSG +V AG MDPF V
Sbjct:   12 HSSTGMLVVGFGNGTFGLYELPAFVNIHTLSVTQNELETVAVNATGEWLAFASRKLGQLLVWEWRSETYVLKQQGHYFDLNAASYSPDGRLLATGADDAKLKLWDTNSGFCYVTFTEHSAPVTAVQFVPSGQAVVSASLDGTVRAFDLNRYKNFRVLTTPEPTQFLSLALDPSGQVVCAGSMDPFNV 198

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BLAST of mRNA_H-elongata_contig80779.15735.1 vs. uniprot
Match: A0A4D9D7J8_9STRA (Utp12 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7J8_9STRA)

HSP 1 Score: 256 bits (653), Expect = 6.060e-77
Identity = 122/185 (65.95%), Postives = 144/185 (77.84%), Query Frame = 0

Query:    2 PTQALLVLGFSIGVFGLYEMPDCTAVHTLSVGQSGIGTCDVNRTGDWLAFGCSRLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDDHKVKLWSTSSGFCFVTFSEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTMVTPQPAQLTSLALDPSGDLVVAGGMDPFE 186
            P  ALLV+GFS GVFGLY++P    VHTLSV    IGT  +N TG+WLA GC+ LGQLLVWEWQSETYVLKQQGH   +N  A+   G V ATGG+D KVKLWST+SGF FVTF+ H+APVTA+ F  +  AV+SASLDGTVRAHDL+RY+NFRT+ TP P QL SLA+DPSG++V AG  +PFE
Sbjct:  314 PGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCASLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFE 498

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BLAST of mRNA_H-elongata_contig80779.15735.1 vs. uniprot
Match: A0A1Y1YMM0_9FUNG (WD repeat protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YMM0_9FUNG)

HSP 1 Score: 254 bits (649), Expect = 1.550e-76
Identity = 112/187 (59.89%), Postives = 148/187 (79.14%), Query Frame = 0

Query:    1 HPTQALLVLGFSIGVFGLYEMPDCTAVHTLSVGQSGIGTCDVNRTGDWLAFGCSRLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDDHKVKLWSTSSGFCFVTFSEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTMVTPQPAQLTSLALDPSGDLVVAGGMDPFEV 187
            H T  LL++GF+ G+FG++E+PD T +HTLS+ Q+ I T  +N +G+WLA G S+LGQLLVWEWQSE+YVLKQQGH Y +NC A+ + G   ATGGDD KVK+W+T+SGFCFVTFS+H + V AV FT N+  V+SAS DGTVRA+DL+RY+NFRT  +P P Q ++L++DPSG++V AG MD FE+
Sbjct:  256 HQTSNLLLVGFTTGIFGIWELPDFTNIHTLSISQNRIDTASINASGEWLALGSSKLGQLLVWEWQSESYVLKQQGHFYDMNCLAYSSDGQYIATGGDDGKVKIWNTTSGFCFVTFSDHSSGVVAVEFTKNSQVVLSASRDGTVRAYDLLRYRNFRTFTSPSPVQFSALSVDPSGEIVCAGSMDTFEI 442

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BLAST of mRNA_H-elongata_contig80779.15735.1 vs. uniprot
Match: A0A4P9XME7_9FUNG (WD40 repeat-like protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XME7_9FUNG)

HSP 1 Score: 252 bits (644), Expect = 5.640e-76
Identity = 115/187 (61.50%), Postives = 142/187 (75.94%), Query Frame = 0

Query:    1 HPTQALLVLGFSIGVFGLYEMPDCTAVHTLSVGQSGIGTCDVNRTGDWLAFGCSRLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDDHKVKLWSTSSGFCFVTFSEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTMVTPQPAQLTSLALDPSGDLVVAGGMDPFEV 187
             P   LL +GF+ GVFG++EMPD   +HTLS+ Q  I TC VN +G+WLAFG  +LGQLLVWEWQSETYVLKQQGH Y +N  AF   G   ATGGDD KVK+WS +SGFCFVTF+EH+A VT V F  N   ++S+SLDGTVRA+D++RY+NFRT +TP+P Q +SLA DPSG++V AG  D FE+
Sbjct:  217 QPRNGLLCVGFASGVFGIWEMPDFNNIHTLSISQHRIDTCAVNASGEWLAFGSCKLGQLLVWEWQSETYVLKQQGHYYDMNVVAFSPDGQNIATGGDDGKVKVWSAASGFCFVTFAEHDAAVTGVEFVKNGQVLLSSSLDGTVRAYDMIRYRNFRTFLTPEPKQFSSLACDPSGEIVCAGSRDSFEI 403

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BLAST of mRNA_H-elongata_contig80779.15735.1 vs. uniprot
Match: H3GD86_PHYRM (Utp12 domain-containing protein n=30 Tax=Peronosporaceae TaxID=4777 RepID=H3GD86_PHYRM)

HSP 1 Score: 253 bits (647), Expect = 5.670e-76
Identity = 120/187 (64.17%), Postives = 143/187 (76.47%), Query Frame = 0

Query:    1 HPTQALLVLGFSIGVFGLYEMPDCTAVHTLSVGQSGIGTCDVNRTGDWLAFGCSRLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDDHKVKLWSTSSGFCFVTFSEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTMVTPQPAQLTSLALDPSGDLVVAGGMDPFEV 187
            H +  +LV+GF  G FGLYE+P    +HTLSV Q+ + T  VN TG+WLAF   +LGQLLVWEW+SETYVLKQQGH + LN A++   G + ATG DD K+KLW T+SGFC+VTF+EH APVTAV+FTP+  AVVSASLDGTVRA DL RYKNFR + TP+P Q  SLALDPSG +V AG MDPF V
Sbjct:  303 HSSTGMLVVGFGNGTFGLYELPAFVNIHTLSVTQNELETVAVNATGEWLAFASRKLGQLLVWEWRSETYVLKQQGHYFDLNAASYSPDGRLLATGADDAKLKLWDTNSGFCYVTFTEHSAPVTAVQFTPSGQAVVSASLDGTVRAFDLNRYKNFRVLTTPEPTQFLSLALDPSGQVVCAGSMDPFNV 489

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BLAST of mRNA_H-elongata_contig80779.15735.1 vs. uniprot
Match: A0A662WSJ9_9STRA (Utp12 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WSJ9_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.210e-75
Identity = 119/187 (63.64%), Postives = 143/187 (76.47%), Query Frame = 0

Query:    1 HPTQALLVLGFSIGVFGLYEMPDCTAVHTLSVGQSGIGTCDVNRTGDWLAFGCSRLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDDHKVKLWSTSSGFCFVTFSEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVRYKNFRTMVTPQPAQLTSLALDPSGDLVVAGGMDPFEV 187
            H +  LL++GF  G FGLYE+P    VHTLSV Q+ + T  VN +G+WLAF   +LGQLLVWEW+SETYVLKQQGH + LN A++   G + ATG DD K+KLW T+SGFC+VTFSEH APVTAV+FTP+  AV+SASLDGTVRA DL RYKNFR + TP+P Q  SLALDPSG +V AG +DPF V
Sbjct:  311 HSSTGLLIVGFGNGTFGLYELPSFVNVHTLSVTQNELETVAVNASGEWLAFASRKLGQLLVWEWRSETYVLKQQGHYFDLNAASYSPDGRLLATGADDAKLKLWDTASGFCYVTFSEHAAPVTAVQFTPSGQAVISASLDGTVRAFDLNRYKNFRVLTTPEPVQFLSLALDPSGQVVCAGSLDPFNV 497

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig80779.15735.1 vs. uniprot

BLAST of mRNA_H-elongata_contig80779.15735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LIH2_ECTSI	7.520e-118	90.37	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5LCN5_9PHAE	1.480e-115	90.91	Utp12 domain-containing protein n=1 Tax=Ectocarpus...	[more]
W7T6B9_9STRA	1.500e-80	66.13	Small nucleolar ribonucleoprotein complex subunit ...	[more]
A0A812ZN46_9DINO	8.580e-79	60.96	Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ...	[more]
A0A2P4WX09_9STRA	1.690e-78	63.64	Periodic tryptophan protein 2 (Fragment) n=1 Tax=P...	[more]
A0A4D9D7J8_9STRA	6.060e-77	65.95	Utp12 domain-containing protein n=1 Tax=Nannochlor...	[more]
A0A1Y1YMM0_9FUNG	1.550e-76	59.89	WD repeat protein n=1 Tax=Basidiobolus meristospor...	[more]
A0A4P9XME7_9FUNG	5.640e-76	61.50	WD40 repeat-like protein n=1 Tax=Thamnocephalis sp...	[more]
H3GD86_PHYRM	5.670e-76	64.17	Utp12 domain-containing protein n=30 Tax=Peronospo...	[more]
A0A662WSJ9_9STRA	1.210e-75	63.64	Utp12 domain-containing protein n=2 Tax=Nothophyto...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 108..147 e-value: 2.6E-6 score: 37.0 coord: 66..105 e-value: 9.3E-5 score: 31.8 coord: 23..63 e-value: 29.0 score: 7.8
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 74..105 e-value: 3.4E-4 score: 21.4 coord: 111..144 e-value: 8.7E-4 score: 20.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 73..114 score: 10.475
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 115..156 score: 11.277
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..187 e-value: 5.5E-36 score: 125.9
IPR027145	Periodic tryptophan protein 2	PANTHER	PTHR19858	WD40 REPEAT PROTEIN	coord: 1..187
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 57..188 score: 21.357
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..17 score: 0.68
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 14..183

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig80779	contig	H-elongata_contig80779:54..2752 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig80779.15735.1	mRNA_H-elongata_contig80779.15735.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig80779 54..2752 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig80779.15735.1 ID=prot_H-elongata_contig80779.15735.1|Name=mRNA_H-elongata_contig80779.15735.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=189bp
HPTQALLVLGFSIGVFGLYEMPDCTAVHTLSVGQSGIGTCDVNRTGDWLA
FGCSRLGQLLVWEWQSETYVLKQQGHGYGLNCAAFGATGSVCATGGDDHK
VKLWSTSSGFCFVTFSEHEAPVTAVRFTPNASAVVSASLDGTVRAHDLVR
YKNFRTMVTPQPAQLTSLALDPSGDLVVAGGMDPFEVL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR027145	PWP2
IPR017986	WD40_repeat_dom
IPR036322	WD40_repeat_dom_sf