prot_H-elongata_contig80772.15734.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80772.15734.1
Unique Nameprot_H-elongata_contig80772.15734.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length42
Homology
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BLAST of mRNA_H-elongata_contig80772.15734.1 vs. uniprot
Match: D8LFS0_ECTSI (Defective in cullin neddylation protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFS0_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 8.540e-11
Identity = 30/42 (71.43%), Postives = 36/42 (85.71%), Query Frame = 0 
Query:    1 MVVLIISWKMKAGGMCVYTRDEWRQGMSTMGVSTMYQLRQKV 42
            +VVLIISWKM+A  MCVY+R EWR+GMS MGVS+  QLRQK+
Sbjct:  114 LVVLIISWKMEAEEMCVYSRQEWRRGMSKMGVSSTRQLRQKL 155
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BLAST of mRNA_H-elongata_contig80772.15734.1 vs. uniprot
Match: UPI00092F3E40 (DCN1-like protein 2 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F3E40)

HSP 1 Score: 45.4 bits (106), Expect = 5.040e-5
Identity = 18/41 (43.90%), Postives = 31/41 (75.61%), Query Frame = 0 
Query:    2 VVLIISWKMKAGGMCVYTRDEWRQGMSTMGVSTMYQLRQKV 42
            V+L+ISW MKAG MC +T+ E+  G+ ++GV ++ + R+K+
Sbjct:   28 VMLVISWHMKAGTMCEFTQKEFIDGLQSLGVDSLEKFREKI 68
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80772.15734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFS0_ECTSI8.540e-1171.43Defective in cullin neddylation protein n=1 Tax=Ec... [more]
UPI00092F3E405.040e-543.90DCN1-like protein 2 n=1 Tax=Lupinus angustifolius ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 1..42
e-value: 1.5E-11
score: 46.1
IPR005176Potentiating neddylation domainPROSITEPS51229DCUN1coord: 1..42
score: 9.867

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80772contigH-elongata_contig80772:2054..2179 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80772.15734.1mRNA_H-elongata_contig80772.15734.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80772 2045..2179 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80772.15734.1 ID=prot_H-elongata_contig80772.15734.1|Name=mRNA_H-elongata_contig80772.15734.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=42bp
MVVLIISWKMKAGGMCVYTRDEWRQGMSTMGVSTMYQLRQKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005176PONY_dom