prot_H-elongata_contig80746.15726.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80746.15726.1
Unique Nameprot_H-elongata_contig80746.15726.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length181
Homology
BLAST of mRNA_H-elongata_contig80746.15726.1 vs. uniprot
Match: D7FR05_ECTSI (SGF29 C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR05_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 1.150e-94
Identity = 144/183 (78.69%), Postives = 157/183 (85.79%), Query Frame = 0
Query:    1 VCDRHFAQWEVDEDKVLESWITHMNTDRDVREFGAVKKRNRSEFSPYGPYGHGEAPAFGGRQGMGGVIGGGHG--DIEGSAGRVVPAGEQVAAKVTNTNENGSWILAEIIRYLAGRGCYEVKDADDPMKCVEVPAESVIRLTDGGQGFAKGDHVLAVFPDTTSFYRGTISKQPVRKGGIVSEV 181
            +C  HFAQWEVDE+KV+ESWI HM+TDRDVRE GAVKKRN SEFSPYGPYGHGEAPAFGG  G GG  GG     D+EG    VVP+GEQVAAKVTNTNENGSWILAEIIRYLAGR CYEVKDADDP+K +EVP  +VIRL +GGQGFAKGD VLAVFPDTTSFYRGTISKQPVRK G+V+E+
Sbjct:   48 ICAEHFAQWEVDEEKVVESWIAHMDTDRDVRELGAVKKRNNSEFSPYGPYGHGEAPAFGG--GRGGGFGGSGCPLDMEGGVRGVVPSGEQVAAKVTNTNENGSWILAEIIRYLAGRACYEVKDADDPLKQIEVPDNNVIRLREGGQGFAKGDDVLAVFPDTTSFYRGTISKQPVRKAGLVAEL 228          
BLAST of mRNA_H-elongata_contig80746.15726.1 vs. uniprot
Match: A0A836CJB6_9STRA (SGF29 tudor-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB6_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.680e-24
Identity = 70/170 (41.18%), Postives = 93/170 (54.71%), Query Frame = 0
Query:    2 CDRHFAQWEVDEDKVLESWITHMNTDRDVREFG-AVKKRNRSEFSPYGPYGHGEAPAFGGRQGMGGVIGGGHGDIEGSAGR-VVPAGEQVAAKVTNTNENGSWILAEIIRYLAGRGCYEVKDADDPMKCVEVPAESVIRLTDGGQGFAKGDHVLAVFPDTTSFYRGTISK 169
            C RHF  W++DE+ VL+++  H++T    RE G AVK R R+   P G      + A    Q               SAG   +  GE+VAA+    ++NGSWILA + RY A    YEV D DD  +   V A  V+RLTD  +G  KG  VLA+FPDTTSFY+G ++K
Sbjct:   49 CARHFRTWQIDEEDVLKAFSDHVSTGFASRELGGAVKFRKRAR--PGGDATQSSSKAARSPQST-------------SAGMSAMKPGEKVAARTNPNDDNGSWILASVQRYYANLDKYEVADEDDTSRKFMVDACFVLRLTDNVEGLHKGGAVLAMFPDTTSFYKGKMAK 203          
BLAST of mRNA_H-elongata_contig80746.15726.1 vs. uniprot
Match: A0A7S2R9B8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R9B8_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.130e-23
Identity = 49/88 (55.68%), Postives = 63/88 (71.59%), Query Frame = 0
Query:   86 GEQVAAKVTNTNENGSWILAEIIRYLAGRGCYEVKDADDPMKCVEVPAESVIRLTDGGQG-FAKGDHVLAVFPDTTSFYRGTISKQPV 172
            GEQVAAKVT T+ENGSWILA + R+ A    Y+V+D DD  K + +P   V+RL+ G +G F K   V+A+FP+TTSFYR  +SKQPV
Sbjct:   49 GEQVAAKVTRTDENGSWILASVQRFFADTETYDVQDEDDTSKLIRLPWNHVMRLSTGAEGCFDKNTKVMAIFPETTSFYRAVVSKQPV 136          
BLAST of mRNA_H-elongata_contig80746.15726.1 vs. uniprot
Match: A0A7S1YT92_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YT92_9STRA)

HSP 1 Score: 104 bits (260), Expect = 4.310e-23
Identity = 65/172 (37.79%), Postives = 93/172 (54.07%), Query Frame = 0
Query:    4 RHFAQWEVDEDKVLESWITHMNTDRDVREFGAVKKRNRSEFSPYGPYGHGEAPAFGGRQGMGGVIGGGHGDIEGSAGRVVPAGEQVAAKVTNTNENGSWILAEIIRYLAGRGCYEVKDADDPMKCVEVPAESVIRLTDGGQG-FAKGDHVLAVFPDTTSFYRGTISKQPVRK 174
            RHF   EVDE+ V+  +++ +++ ++V+  G      RS       +  G AP    R+                +      GEQVAAKVT T+ENGSWILA + R+ A    Y+V+D DD  K + +P   V+ L+ G +G F KG  V+A+FP+TTSFY   +SKQPV K
Sbjct:  239 RHFESMEVDEEAVIGGFLSRLDSGQEVQPAGPAADYARST-----AFFDGTAPDDAVRKRR-------------RSKNAARPGEQVAAKVTRTDENGSWILARVQRFYADTDTYDVQDEDDTSKLIRLPWNHVMTLSTGAEGGFNKGTRVMAIFPETTSFYSAVVSKQPVWK 392          
BLAST of mRNA_H-elongata_contig80746.15726.1 vs. uniprot
Match: A0A6U3XFK5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3XFK5_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.820e-23
Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 0
Query:   86 GEQVAAKVTNTNENGSWILAEIIRYLAGRGCYEVKDADDPMKCVEVPAESVIRLTDGGQG-FAKGDHVLAVFPDTTSFYRGTISKQPVRKGGIVSE 180
            G+QVAAKVT T+ENGSWILA ++R+ A    Y+V+D DD  K + +P   V+RL+ G +G F KG  V+A+FP+TTSFYR  ISK P    G+ ++
Sbjct:  153 GDQVAAKVTRTDENGSWILAYVLRFYAESETYDVQDEDDTSKLIRLPWNHVMRLSTGTEGWFQKGQRVMAIFPETTSFYRAIISKHPTYTSGVSAD 248          
BLAST of mRNA_H-elongata_contig80746.15726.1 vs. uniprot
Match: A0A7S1VH71_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VH71_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.630e-22
Identity = 49/90 (54.44%), Postives = 63/90 (70.00%), Query Frame = 0
Query:   86 GEQVAAKVTNTNENGSWILAEIIRYLAGRGCYEVKDADDPMKCVEVPAESVIRLTDGGQG-FAKGDHVLAVFPDTTSFYRGTISKQPVRK 174
            GEQVAAKVT T+ENGSWILA + R+ A    Y+V+D DD  K + +P   V+RL+ G +G F KG   +A+FP+TTSFYR  +SK PV K
Sbjct:  109 GEQVAAKVTRTDENGSWILASVQRFYADTETYDVQDEDDTSKLIRLPWSHVMRLSTGAEGCFKKGTDCMAIFPETTSFYRSKVSKSPVWK 198          
BLAST of mRNA_H-elongata_contig80746.15726.1 vs. uniprot
Match: K0R522_THAOC (SGF29 C-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R522_THAOC)

HSP 1 Score: 98.6 bits (244), Expect = 1.490e-21
Identity = 48/96 (50.00%), Postives = 65/96 (67.71%), Query Frame = 0
Query:   86 GEQVAAKVTNTNENGSWILAEIIRYLAGRGCYEVKDADDPMKCVEVPAESVIRLTDGGQGFA-KGDHVLAVFPDTTSFYRGTISKQPVRKGGIVSE 180
            G+QVAAKVT + ENGSWILA ++RY      Y+V+D DD  K + +P   V+RL+ G +G+  K   V+A+FP+TTSFYR  ISKQPV   G  ++
Sbjct:  150 GDQVAAKVTRSEENGSWILAYVLRYYPESETYDVQDEDDTSKLIRLPWNHVMRLSTGSEGWLNKSQQVMAIFPETTSFYRAFISKQPVWTSGTAAD 245          
BLAST of mRNA_H-elongata_contig80746.15726.1 vs. uniprot
Match: A0A7S3Q232_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q232_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 3.760e-21
Identity = 48/89 (53.93%), Postives = 62/89 (69.66%), Query Frame = 0
Query:   87 EQVAAKVTNTNENGSWILAEIIRYLAGRGCYEVKDADDPMKCVEVPAESVIRLTDGGQG-FAKGDHVLAVFPDTTSFYRGTISKQPVRK 174
            EQVAAK+T TNENGSWILA + R+ A    Y+V+D DD  K + +P   V+RL+ G +G F K   V+A+FP+TTSFYR  +SK PV K
Sbjct:  197 EQVAAKITRTNENGSWILASVQRFYAESETYDVQDEDDTSKLIRLPWTHVMRLSTGTEGCFTKNTKVMAIFPETTSFYRAIVSKDPVWK 285          
BLAST of mRNA_H-elongata_contig80746.15726.1 vs. uniprot
Match: B7G5H0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5H0_PHATC)

HSP 1 Score: 96.7 bits (239), Expect = 4.650e-21
Identity = 47/90 (52.22%), Postives = 62/90 (68.89%), Query Frame = 0
Query:   86 GEQVAAKVTNTNENGSWILAEIIRYLAGRGCYEVKDADDPMKCVEVPAESVIRLTDGGQG-FAKGDHVLAVFPDTTSFYRGTISKQPVRK 174
            GEQVAAKVT T+ENGSWILA + R+      Y+V+D DD  K + +P   V+RL+ G +G F K +  +A+FP+TTSFYR  ISK P+ K
Sbjct:  129 GEQVAAKVTRTDENGSWILASVQRFYTDTETYDVQDEDDTSKLIRLPWSHVMRLSTGAEGCFKKDNDCMAIFPETTSFYRAKISKDPIWK 218          
BLAST of mRNA_H-elongata_contig80746.15726.1 vs. uniprot
Match: A0A1Z5JFB5_FISSO (SAGA-associated factor 29 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFB5_FISSO)

HSP 1 Score: 95.5 bits (236), Expect = 1.230e-20
Identity = 58/170 (34.12%), Postives = 87/170 (51.18%), Query Frame = 0
Query:    4 RHFAQWEVDEDKVLESWITHMNTDRDVREFGAVKKRNRSEFSPYGPYGHGEAPAFGGRQGMGGVIGGGHGDIEGSAGRVVPAGEQVAAKVTNTNENGSWILAEIIRYLAGRGCYEVKDADDPMKCVEVPAESVIRLTDGGQG-FAKGDHVLAVFPDTTSFYRGTISKQPV 172
            RHF Q E+DE++ +  ++  +     + ++     R  + F        G AP+                ++          GEQVAAKVT T+ENGSWILA + R+      Y+V+D DD  K + +P   V+RL++G +G F K    +A+FP+TTSFYR  +SK PV
Sbjct:   67 RHFEQMEIDEEECIGGFLERLEQPTGITDY----MRKTAFFD-------GHAPSL---------------EVRKRKRLAARPGEQVAAKVTRTDENGSWILASVQRFYPDSETYDVQDEDDTSKLIRLPWTHVMRLSNGTEGNFVKDKDCMAIFPETTSFYRSKVSKNPV 210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80746.15726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR05_ECTSI1.150e-9478.69SGF29 C-terminal domain-containing protein n=1 Tax... [more]
A0A836CJB6_9STRA1.680e-2441.18SGF29 tudor-like domain-containing protein n=1 Tax... [more]
A0A7S2R9B8_9STRA2.130e-2355.68Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1YT92_9STRA4.310e-2337.79Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6U3XFK5_9STRA5.820e-2351.04Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1VH71_9STRA1.630e-2254.44Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
K0R522_THAOC1.490e-2150.00SGF29 C-terminal domain-containing protein n=1 Tax... [more]
A0A7S3Q232_9STRA3.760e-2153.93Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B7G5H0_PHATC4.650e-2152.22Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5JFB5_FISSO1.230e-2034.12SAGA-associated factor 29 n=2 Tax=Fistulifera sola... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 143..178
e-value: 8.4E-8
score: 34.1
NoneNo IPR availableGENE3D2.30.30.140coord: 87..139
e-value: 5.9E-10
score: 40.9
IPR010750SGF29 tudor-like domainPFAMPF07039DUF1325coord: 86..174
e-value: 4.1E-20
score: 72.2
IPR010750SGF29 tudor-like domainPROSITEPS51518SGF29_Ccoord: 79..181
score: 34.103
IPR037802SAGA-associated factor 29PANTHERPTHR21539UNCHARACTERIZEDcoord: 74..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80746contigH-elongata_contig80746:100..2807 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80746.15726.1mRNA_H-elongata_contig80746.15726.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80746 100..2807 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80746.15726.1 ID=prot_H-elongata_contig80746.15726.1|Name=mRNA_H-elongata_contig80746.15726.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp
VCDRHFAQWEVDEDKVLESWITHMNTDRDVREFGAVKKRNRSEFSPYGPY
GHGEAPAFGGRQGMGGVIGGGHGDIEGSAGRVVPAGEQVAAKVTNTNENG
SWILAEIIRYLAGRGCYEVKDADDPMKCVEVPAESVIRLTDGGQGFAKGD
HVLAVFPDTTSFYRGTISKQPVRKGGIVSEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010750SGF29_tudor-like_dom
IPR037802SGF29