prot_H-elongata_contig80471.15697.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80471.15697.1
Unique Nameprot_H-elongata_contig80471.15697.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length119
Homology
BLAST of mRNA_H-elongata_contig80471.15697.1 vs. uniprot
Match: A0A6H5KJU5_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU5_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 5.780e-40
Identity = 90/179 (50.28%), Postives = 101/179 (56.42%), Query Frame = 0
Query:    1 QVKKTAFAEGVRCASLGSRRTLCGNEAVFSLRSDAKMTDACLELQKNK----------------------------------TEKKK--------------------------------STDGCPLLTAKGQREFPYRALASVRDIEELAELGKRNGTCAYYGARKAAALAQVAILTHA 113
            +VKKTAFA+GVRCASLGSRRTLCGNE V SL++D KM DACLELQKNK                                  TE K+                                +TDGCPLL A GQREFPYRALASVRDIEELA LGK  GTCAYYGARKAA+LAQ+ ++ +A
Sbjct:  270 EVKKTAFAKGVRCASLGSRRTLCGNERVSSLKTDGKMRDACLELQKNKKSSSKKTXXXXXXXXXXXXXXXXXXXXXXXTEPLTEAKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTTDGCPLLAADGQREFPYRALASVRDIEELAALGKEEGTCAYYGARKAASLAQLVVMPYA 448          
BLAST of mRNA_H-elongata_contig80471.15697.1 vs. uniprot
Match: D8LPY7_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY7_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 7.910e-39
Identity = 89/180 (49.44%), Postives = 100/180 (55.56%), Query Frame = 0
Query:    1 QVKKTAFAEGVRCASLGSRRTLCGNEAVFSLRSDAKMTDACLELQKNK--------------------------------------------------TEKKK-----------------STDGCPLLTAKGQREFPYRALASVRDIEELAELGKRNGTCAYYGARKAAALAQVAILTHA 113
            +VKKTAFA+GVRCASLGSRRTLCGNE V SL++D KM DACLELQKNK                                                  T K +                 +TDGCPLL A GQREFPYRALASVRDIEELA LGK  GTCAYYGARKAA+LAQ+ ++ +A
Sbjct:  270 EVKKTAFAKGVRCASLGSRRTLCGNERVSSLKTDGKMRDACLELQKNKKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLGTRKSEGEXXXXXXXXXXXXXXGTTDGCPLLAADGQREFPYRALASVRDIEELAALGKEEGTCAYYGARKAASLAQLVVMPYA 449          
BLAST of mRNA_H-elongata_contig80471.15697.1 vs. uniprot
Match: A0A835YWY4_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY4_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.390e-28
Identity = 69/138 (50.00%), Postives = 82/138 (59.42%), Query Frame = 0
Query:    1 QVKKTAFAEGVRCASLGSRRTLCGNEAVFSLRSDAKMTDACLELQKNKTE-------------------------KKKSTDGCPLLTAKGQREFPYRALASVRDIEELAELGKRNGTCAYYGARKAAALAQVAILTHA 113
            +VKKTAFA GVRC +LG RR LC N AV SL SDA+MTDACL+LQK K +                         +K    GC  L+   QREF   ALA+VRDIEEL ELG+    C YYG RKAAALAQ+ ++ +A
Sbjct:  251 EVKKTAFAAGVRCVTLGGRRNLCINPAVSSLSSDARMTDACLDLQKGKKKASCGSSCAQPPPAKRAKQGVAAGGGRKGEKRGCEWLSVATQREFRDHALAAVRDIEELGELGRGLHACPYYGTRKAAALAQLVVMPYA 388          
BLAST of mRNA_H-elongata_contig80471.15697.1 vs. uniprot
Match: A0A8K1FJA8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJA8_PYTOL)

HSP 1 Score: 100 bits (248), Expect = 4.080e-22
Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 0
Query:    1 QVKKTAFAEGVRCASLGSRRTLCGNEAVFSLRSDAKMTDACLEL---QKNKTEKKKSTDGCPLLTAKGQREFPYRALASVRDIEELAELGKRNGTCAYYGARKAAALAQVAILTHAI 114
            ++ KT F+E +R  SLGSR+ LC NE V SLRSD +MTD CL++    KNK +KKK    CP    +    +   ALA V+DIE+L  LG+    C+YYGAR++  LAQV  + +A+
Sbjct:  249 EIHKTPFSEHIRVVSLGSRKNLCVNETVTSLRSDLRMTDKCLDMLQGSKNKKDKKKKAAKCPYYDKELLGRYKDYALAQVQDIEDLHLLGQEMSICSYYGARESIPLAQVVAMPYAM 365          
BLAST of mRNA_H-elongata_contig80471.15697.1 vs. uniprot
Match: A0A5D6Y0V7_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0V7_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.420e-21
Identity = 55/124 (44.35%), Postives = 75/124 (60.48%), Query Frame = 0
Query:    1 QVKKTAFAEGVRCASLGSRRTLCGNEAVFSLRSDAKMTDACLELQKNKTE----------KKKSTDGCPLLTAKGQREFPYRALASVRDIEELAELGKRNGTCAYYGARKAAALAQVAILTHAI 114
            ++++TAF   VR  SLGSR+ LC N  V +LRSDA+MTDACL++ +N +           KKK    CP    +    F   ALA+VRDIE+L +LG    TCAYYG R++  LAQV  + +A+
Sbjct:  247 EIRRTAFGARVRVVSLGSRKNLCTNPRVTALRSDAQMTDACLDMLQNSSSSKAKAVASRSKKKRDAKCPFYDKERLGHFRDHALAAVRDIEDLHDLGSDLTTCAYYGTRESVPLAQVVAMPYAM 370          
BLAST of mRNA_H-elongata_contig80471.15697.1 vs. uniprot
Match: K3W6Y0_GLOUD (Helicase ATP-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6Y0_GLOUD)

HSP 1 Score: 93.2 bits (230), Expect = 1.100e-19
Identity = 51/121 (42.15%), Postives = 72/121 (59.50%), Query Frame = 0
Query:    1 QVKKTAFAEGVRCASLGSRRTLCGNEAVFSLRSDAKMTDACLEL-------QKNKTEKKKSTDGCPLLTAKGQREFPYRALASVRDIEELAELGKRNGTCAYYGARKAAALAQVAILTHAI 114
            +++KT F + +R  SLGSR+ LC N +V SLRSD +MTD CL++        K   +KKK+T  CP    +    +   ALA V DIEEL ELG     C+YYG R++  LAQV  + +++
Sbjct:  265 EIRKTVFGDHIRVVSLGSRKNLCTNPSVASLRSDLQMTDKCLDMLQGAKKQTKAAKQKKKATGKCPFYDKELLGYYKDYALAHVHDIEELHELGDEMSICSYYGTRESVPLAQVIAMPYSM 385          
BLAST of mRNA_H-elongata_contig80471.15697.1 vs. uniprot
Match: A0A3Q0DVE4_CARSF (ATP-dependent DNA helicase DDX11 isoform X1 n=2 Tax=Carlito syrichta TaxID=1868482 RepID=A0A3Q0DVE4_CARSF)

HSP 1 Score: 92.0 bits (227), Expect = 2.790e-19
Identity = 53/125 (42.40%), Postives = 70/125 (56.00%), Query Frame = 0
Query:    1 QVKKTAFAEGVRCASLGSRRTLCGNEAVFSLRSDAKMTDACLELQKNKTEKKKSTD-------------GCPLLTAKGQREFPYRALASVRDIEELAELGKRNGTCAYYGARKAAALAQVAILTH 112
            +VKK+ F + VR  SLGSR++LC NE V SLRS   + D C+ELQ++K EKK   +              CP    +        ALA V+DIE+LA LGK  G C YYG+R A   AQ+ +L +
Sbjct:  245 EVKKSPFGKDVRLVSLGSRQSLCVNEDVKSLRSVQLINDRCMELQRSKHEKKHGAEQEKPKRRRQEKQAACPFYNCEQMHLLRDEALAGVKDIEQLAALGKEAGACPYYGSRFAIPAAQLVVLPY 369          
BLAST of mRNA_H-elongata_contig80471.15697.1 vs. uniprot
Match: A0A1Y2AQU1_9FUNG (ATP-dependent DNA helicase CHL1 n=2 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2AQU1_9FUNG)

HSP 1 Score: 91.3 bits (225), Expect = 5.150e-19
Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = 0
Query:    1 QVKKTAFAEGVRCASLGSRRTLCGNEAVFSLRSDAKMTDACLELQKNKTEKKKSTDGCPLLTAKGQ--REFPYRALASVRDIEELAELGKRNGTCAYYGARKAAALAQVAILTH 112
            ++KKT + E V+  SLGSR+ LC N+ V  L S  +M D CL+LQK+K  K      CP L  + +  R+F     A+VRDIEELAELGK  G C YYG R A   +Q+  L +
Sbjct:  211 ELKKTEYVETVKSLSLGSRKNLCINDQVTRLSSAPRMNDKCLDLQKDKANK------CPYLPKEKRPLRDFSDTINATVRDIEELAELGKAKGVCPYYGTRAALPSSQIVTLPY 318          
BLAST of mRNA_H-elongata_contig80471.15697.1 vs. uniprot
Match: A0A507FI29_9FUNG (ATP-dependent DNA helicase CHL1 n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FI29_9FUNG)

HSP 1 Score: 91.3 bits (225), Expect = 5.150e-19
Identity = 52/114 (45.61%), Postives = 69/114 (60.53%), Query Frame = 0
Query:    1 QVKKTAFAEGVRCASLGSRRTLCGNEAVFSLRSDAKMTDACLELQKNKTEKKKSTDGCPLLTA--KGQREFPYRALASVRDIEELAELGKRNGTCAYYGARKAAALAQVAILTH 112
            ++KKT ++E ++  SLGSR+ LC NE V  L S  +M DACL+LQK K     +T  CP L +  K  R+F     ASV+DIEELA LGK    C+YYGAR     +Q+  L +
Sbjct:  222 ELKKTEYSETIKSLSLGSRKNLCINEDVLKLSSAPRMNDACLDLQKGKG----TTSKCPYLPSEKKELRDFTDLVNASVKDIEELAHLGKSKRVCSYYGARNTIPGSQIVTLPY 331          
BLAST of mRNA_H-elongata_contig80471.15697.1 vs. uniprot
Match: A0A015KHZ2_RHIIW (ATP-dependent DNA helicase CHL1 n=11 Tax=Rhizophagus TaxID=1129544 RepID=A0A015KHZ2_RHIIW)

HSP 1 Score: 89.0 bits (219), Expect = 3.330e-18
Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 0
Query:    1 QVKKTAFAEGVRCASLGSRRTLCGNEAVFSLRSDAKMTDACLELQKNKTEKKKSTDGCPLLTAKGQ-REFPYR--ALASVRDIEELAELGKRNGTCAYYGARKAAALAQVAILTH 112
            +++KT +AE V+C SLGSR+ LC NE V  L++  ++ + CL++QK     KK    CP +  + + R   YR   LASVRDIEEL ++G++   C+YYG RK+    Q+ IL +
Sbjct:  234 ELRKTVYAEDVKCVSLGSRKNLCINEEVRKLKNINRINERCLDMQK---AGKKPEKRCPYIPIRDKSRMLDYRDHVLASVRDIEELVDIGRKLNACSYYGTRKSIRQCQIVILPY 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80471.15697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJU5_9PHAE5.780e-4050.28Helicase ATP-binding domain-containing protein n=1... [more]
D8LPY7_ECTSI7.910e-3949.44Helicase ATP-binding domain-containing protein n=1... [more]
A0A835YWY4_9STRA1.390e-2850.00Helicase C-terminal domain-containing protein n=1 ... [more]
A0A8K1FJA8_PYTOL4.080e-2246.15Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y0V7_9STRA1.420e-2144.35Helicase ATP-binding domain-containing protein n=1... [more]
K3W6Y0_GLOUD1.100e-1942.15Helicase ATP-binding domain-containing protein n=1... [more]
A0A3Q0DVE4_CARSF2.790e-1942.40ATP-dependent DNA helicase DDX11 isoform X1 n=2 Ta... [more]
A0A1Y2AQU1_9FUNG5.150e-1945.61ATP-dependent DNA helicase CHL1 n=2 Tax=Rhizoclosm... [more]
A0A507FI29_9FUNG5.150e-1945.61ATP-dependent DNA helicase CHL1 n=1 Tax=Chytriomyc... [more]
A0A015KHZ2_RHIIW3.330e-1841.74ATP-dependent DNA helicase CHL1 n=11 Tax=Rhizophag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010614DEAD2PFAMPF06733DEAD_2coord: 8..112
e-value: 1.3E-18
score: 67.2
NoneNo IPR availableGENE3D3.40.50.300coord: 1..117
e-value: 3.8E-16
score: 61.0
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 2..110
IPR028331ATP-dependent RNA helicase CHL1/DDX11PANTHERPTHR11472:SF41ATP-DEPENDENT DNA HELICASE DDX11-RELATEDcoord: 2..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80471contigH-elongata_contig80471:1396..2582 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80471.15697.1mRNA_H-elongata_contig80471.15697.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80471 1396..2582 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80471.15697.1 ID=prot_H-elongata_contig80471.15697.1|Name=mRNA_H-elongata_contig80471.15697.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
QVKKTAFAEGVRCASLGSRRTLCGNEAVFSLRSDAKMTDACLELQKNKTE
KKKSTDGCPLLTAKGQREFPYRALASVRDIEELAELGKRNGTCAYYGARK
AAALAQVAILTHAIHYFH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010614DEAD_2
IPR028331CHL1/DDX11