prot_H-elongata_contig8041.15694.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8041.15694.1
Unique Nameprot_H-elongata_contig8041.15694.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length95
Homology
BLAST of mRNA_H-elongata_contig8041.15694.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.760e-25
Identity = 53/94 (56.38%), Postives = 64/94 (68.09%), Query Frame = 0
Query:    1 MDDILWWGSDEDDMLDTLDKTLTRLKKVEILVFYLKDFVADKCLFFYTRMTLCGKVYSGGQVTHDPERLCELTNMPRPRTVGELMRFLQAANWM 94
            +DD+++WG D+DD+LDTLD  L RL+   + V       A KC FF T +T CGKVYS GQV HDPERL  L  M RP T GELM+FLQA NW+
Sbjct:  910 VDDVVYWGMDKDDLLDTLDLILDRLEGAGLYV------AAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWL 997          
BLAST of mRNA_H-elongata_contig8041.15694.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 4.730e-23
Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    1 MDDILWWGSDEDDMLDTLDKTLTRLKKVEILVFYLKDFVADKCLFFYTRMTLCGKVYSGGQVTHDPERLCELTNMPRPRTVGELMRFLQAANWM 94
            +DD +WWG DE D+L+TLD+ L RL+   I         A KC FF T++  CGKVYSGGQV  DPERL  LT+M RP T G+LM+FLQA  W+
Sbjct:  563 VDDDIWWGIDETDLLNTLDEILWRLQDNGIFA------AAHKCPFFDTKIRWCGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWL 650          
BLAST of mRNA_H-elongata_contig8041.15694.1 vs. uniprot
Match: A0A6H5K9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.180e-22
Identity = 49/94 (52.13%), Postives = 61/94 (64.89%), Query Frame = 0
Query:    1 MDDILWWGSDEDDMLDTLDKTLTRLKKVEILVFYLKDFVADKCLFFYTRMTLCGKVYSGGQVTHDPERLCELTNMPRPRTVGELMRFLQAANWM 94
            +DD++WWG DE D+ + LD+ L RL+   I         A  CLFF T++  CGKVYSGGQV HDP RL  L +M RP T GELM+ LQA NW+
Sbjct:  622 VDDVVWWGIDETDLPNALDEILRRLEDKGIFA------AAHMCLFFDTKIKWCGKVYSGGQVAHDPARLQGLADMRRPETAGELMQVLQAVNWL 709          
BLAST of mRNA_H-elongata_contig8041.15694.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 4.450e-20
Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 0
Query:    1 MDDILWWGSDEDDMLDTLDKTLTRLKKVEILVFYLKDFVADKCLFFYTRMTLCGKVYSGGQVTHDPERLCELTNMPRPRTVGELMRFLQAANWM 94
            +DDI++WG  E+D+L+TLD  L R +   + V       A KC F+ T +  CGKVYS G + HD +RL  L N+ RP T GELM+FLQA NW+
Sbjct:  812 VDDIVYWGETEEDLLNTLDLILARFEHHGLFV------AAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWL 899          
BLAST of mRNA_H-elongata_contig8041.15694.1 vs. uniprot
Match: A0A6A3L091_9STRA (RNA-directed DNA polymerase n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L091_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.570e-9
Identity = 34/94 (36.17%), Postives = 49/94 (52.13%), Query Frame = 0
Query:    1 MDDILWWGSDEDDMLDTLDKTLTRLKKVEILVFYLKDFVADKCLFFYTRMTLCGKVYSGGQVTHDPERLCELTNMPRPRTVGELMRFLQAANWM 94
            +DDIL + S  D+ L    +    +K   + +         KC+ F  ++  CGK+ SG  + HDPERL  L N+P P TV  L +FL A NW+
Sbjct:  520 IDDILLFASSMDEFLRVFREFFELIKDHGLKL------SVTKCVLFQPQVLWCGKMVSGTDIQHDPERLSALANLPPPPTVAALQQFLCAVNWV 607          
BLAST of mRNA_H-elongata_contig8041.15694.1 vs. uniprot
Match: A0A3B3IB43_ORYLA (Ribonuclease H n=1 Tax=Oryzias latipes TaxID=8090 RepID=A0A3B3IB43_ORYLA)

HSP 1 Score: 60.1 bits (144), Expect = 1.870e-8
Identity = 31/92 (33.70%), Postives = 52/92 (56.52%), Query Frame = 0
Query:    1 MDDILWWGSDEDDMLDTLDKTLTRLKKVEILVFYLKDFVADKCLFFYTRMTLCGKVYSGGQVTHDPERLCELTNMPRPRTVGELMRFLQAAN 92
            MDD+L WG+ +++  + L + L+RL++  + +        DKC F  +R+   G++  G  V+ DPE++  +T M  P  V E+ RFL  AN
Sbjct:  578 MDDVLIWGTTQEEHDERLRRALSRLQEAGVTL-------NDKCEFSKSRIKFLGQIIEGSGVSPDPEKVKAITGMQEPTNVSEVRRFLGMAN 662          
BLAST of mRNA_H-elongata_contig8041.15694.1 vs. uniprot
Match: A0A3B3I9J4_ORYLA (Ribonuclease H n=2 Tax=Oryzias latipes TaxID=8090 RepID=A0A3B3I9J4_ORYLA)

HSP 1 Score: 60.1 bits (144), Expect = 1.900e-8
Identity = 31/92 (33.70%), Postives = 52/92 (56.52%), Query Frame = 0
Query:    1 MDDILWWGSDEDDMLDTLDKTLTRLKKVEILVFYLKDFVADKCLFFYTRMTLCGKVYSGGQVTHDPERLCELTNMPRPRTVGELMRFLQAAN 92
            MDD+L WG+ +++  + L + L+RL++  + +        DKC F  +R+   G++  G  V+ DPE++  +T M  P  V E+ RFL  AN
Sbjct:  582 MDDVLIWGTTQEEHDERLRRALSRLQEAGVTL-------NDKCEFSKSRIKFLGQIIEGSGVSPDPEKVKAITGMQEPTNVSEVRRFLGMAN 666          
BLAST of mRNA_H-elongata_contig8041.15694.1 vs. uniprot
Match: A0A3P9K6Z0_ORYLA (Ribonuclease H n=1 Tax=Oryzias latipes TaxID=8090 RepID=A0A3P9K6Z0_ORYLA)

HSP 1 Score: 56.6 bits (135), Expect = 3.100e-7
Identity = 29/92 (31.52%), Postives = 51/92 (55.43%), Query Frame = 0
Query:    1 MDDILWWGSDEDDMLDTLDKTLTRLKKVEILVFYLKDFVADKCLFFYTRMTLCGKVYSGGQVTHDPERLCELTNMPRPRTVGELMRFLQAAN 92
            MDD+L WG+ +++  + L + L+RL++  + +        DKC F  +++   G++     V+ DPE++  +T M  P  V E+ RFL  AN
Sbjct:  148 MDDVLIWGTTQEEHDERLRRALSRLQEAGVTL-------NDKCEFSKSKIKFLGQIIEASGVSPDPEKVKAITGMQEPTNVSEVRRFLGMAN 232          
BLAST of mRNA_H-elongata_contig8041.15694.1 vs. uniprot
Match: UPI00165B1E81 (uncharacterized protein K02A2.6-like n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165B1E81)

HSP 1 Score: 56.6 bits (135), Expect = 3.150e-7
Identity = 30/92 (32.61%), Postives = 49/92 (53.26%), Query Frame = 0
Query:    1 MDDILWWGSDEDDMLDTLDKTLTRLKKVEILVFYLKDFVADKCLFFYTRMTLCGKVYSGGQVTHDPERLCELTNMPRPRTVGELMRFLQAAN 92
            MDD+L WGS++D+  + L + L RL+   + +        DKC F  +++   G+V     V+ DPE++  +  M  P  + E+ RFL  AN
Sbjct:  582 MDDVLIWGSNQDEHDERLRRALDRLRNAGVTL-------NDKCEFSMSKIKFLGQVIEANGVSPDPEKVSAVRAMKEPSDISEVRRFLGMAN 666          
BLAST of mRNA_H-elongata_contig8041.15694.1 vs. uniprot
Match: A0A7D9ISG3_PARCT (Reverse transcriptase domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ISG3_PARCT)

HSP 1 Score: 55.5 bits (132), Expect = 7.350e-7
Identity = 29/94 (30.85%), Postives = 50/94 (53.19%), Query Frame = 0
Query:    1 MDDILWWGSDEDDMLDTLDKTLTRLKKVEILVFYLKDFVADKCLFFYTRMTLCGKVYSGGQVTHDPERLCELTNMPRPRTVGELMRFLQAANWM 94
            +DDIL WGSDE +    L+ TL + +++ + +        DKC F    ++ CG  ++   VTHD  ++  + +MP P +  E+ R L   N++
Sbjct:  191 IDDILIWGSDEQEHGARLEATLQQCEEINLTL------NVDKCKFNVNEVSYCGHNFTKDGVTHDESKIKAIQDMPTPSSKKEIERLLGIVNYL 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8041.15694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE1.760e-2556.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE4.730e-2354.26CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K9E0_9PHAE1.180e-2252.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE4.450e-2047.87Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6A3L091_9STRA1.570e-936.17RNA-directed DNA polymerase n=6 Tax=Phytophthora T... [more]
A0A3B3IB43_ORYLA1.870e-833.70Ribonuclease H n=1 Tax=Oryzias latipes TaxID=8090 ... [more]
A0A3B3I9J4_ORYLA1.900e-833.70Ribonuclease H n=2 Tax=Oryzias latipes TaxID=8090 ... [more]
A0A3P9K6Z0_ORYLA3.100e-731.52Ribonuclease H n=1 Tax=Oryzias latipes TaxID=8090 ... [more]
UPI00165B1E813.150e-732.61uncharacterized protein K02A2.6-like n=1 Tax=Fundu... [more]
A0A7D9ISG3_PARCT7.350e-730.85Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8041contigH-elongata_contig8041:8868..9152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8041.15694.1mRNA_H-elongata_contig8041.15694.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8041 8862..9180 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8041.15694.1 ID=prot_H-elongata_contig8041.15694.1|Name=mRNA_H-elongata_contig8041.15694.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
MDDILWWGSDEDDMLDTLDKTLTRLKKVEILVFYLKDFVADKCLFFYTRM
TLCGKVYSGGQVTHDPERLCELTNMPRPRTVGELMRFLQAANWM*
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