prot_H-elongata_contig80399.15692.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80399.15692.1
Unique Nameprot_H-elongata_contig80399.15692.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length75
Homology
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BLAST of mRNA_H-elongata_contig80399.15692.1 vs. uniprot
Match: D7G0L4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0L4_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 2.140e-30
Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = 0 
Query:    1 KVHTCLIPSERDFLLDCLDEIHRRCDSIFDGRNHAIAFYERGTVESLLEMLRMFKLDEVFVRQAVKTLVQLCGQD 75
            +VHTCL+PSERDFLL CLDE+H RCDS+  GR    AF+E+G VE+LLEML MFKLDEVF+RQAV+TL+ LCGQD
Sbjct:   28 QVHTCLVPSERDFLLACLDEMHCRCDSLLHGRKQVAAFHEQGAVEALLEMLGMFKLDEVFLRQAVRTLIPLCGQD 102
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80399.15692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0L4_ECTSI2.140e-3072.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80399contigH-elongata_contig80399:2209..2831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80399.15692.1mRNA_H-elongata_contig80399.15692.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80399 2209..2831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80399.15692.1 ID=prot_H-elongata_contig80399.15692.1|Name=mRNA_H-elongata_contig80399.15692.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp
KVHTCLIPSERDFLLDCLDEIHRRCDSIFDGRNHAIAFYERGTVESLLEM
LRMFKLDEVFVRQAVKTLVQLCGQD
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