prot_H-elongata_contig80344.15685.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80344.15685.1
Unique Nameprot_H-elongata_contig80344.15685.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length163
Homology
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: D8LGT2_ECTSI (PEra, plastid Era GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGT2_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 4.960e-73
Identity = 123/162 (75.93%), Postives = 134/162 (82.72%), Query Frame = 0
Query:    1 MMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 162
            MMNFVQEAMGDADA+L VTDLFE +FA+ Q        IFERMLA+GKPIVVAVNKVDLLPSDG  GDG  R G L+A+  KEVGSL+DVL +W++RLPGATVLPISALEGINT  LA ELK HIPEGPPLF TDVMSDKP RFFA EIIREQIF SFSQE+
Sbjct:  141 MMNFVQEAMGDADAILFVTDLFETEFANTQ--------IFERMLAAGKPIVVAVNKVDLLPSDGKSGDGPERPGLLAASTQKEVGSLKDVLGKWEERLPGATVLPISALEGINTVDLAGELKKHIPEGPPLFGTDVMSDKPQRFFAAEIIREQIFGSFSQEI 294          
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A6H5KDG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDG7_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 4.730e-72
Identity = 124/162 (76.54%), Postives = 132/162 (81.48%), Query Frame = 0
Query:    1 MMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 162
            MMNFVQEAMGDADA+L VTDLFE DFA+ Q        IFERMLA+GKPIVVAVNKVDLLPSDG  GDG  R G L+A   KEVGSL DVL +W++RLPGATVLPISALEGINT  LA ELK HIPEGPPLF TDVMSDKP RFFA EIIREQIF SFSQE+
Sbjct:  239 MMNFVQEAMGDADAILFVTDLFETDFANTQ--------IFERMLAAGKPIVVAVNKVDLLPSDGKSGDGPERPGLLAAGTQKEVGSLTDVLGKWEERLPGATVLPISALEGINTVDLAGELKKHIPEGPPLFGTDVMSDKPQRFFAAEIIREQIFGSFSQEI 392          
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A836C977_9STRA (PEra, plastid Era GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C977_9STRA)

HSP 1 Score: 157 bits (396), Expect = 4.740e-44
Identity = 82/162 (50.62%), Postives = 111/162 (68.52%), Query Frame = 0
Query:    1 MMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 162
            MM FV+EA+GDAD +L +TDLFE +F          + I  R+ + GKP+VVA+NK+DLLP    GG G   L   S  +L+EVGSLE++  RW+++LP A V  ISA EG  T ++ +E+  H+PE PPL+A D MSD+P+RFFA+EIIREQ+F   SQE+
Sbjct:   94 MMAFVKEAIGDADVLLFLTDLFEKEFPD--------EDILNRINSMGKPLVVAINKIDLLP----GGGGRVTL---SDEKLEEVGSLEEITARWKEQLPTAHVCAISAAEGTGTEEMLKEISRHLPESPPLYAADTMSDRPMRFFASEIIREQVFTCMSQEI 240          
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: W7U379_9STRA (Gtp-binding protein era n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U379_9STRA)

HSP 1 Score: 142 bits (358), Expect = 5.090e-38
Identity = 75/162 (46.30%), Postives = 106/162 (65.43%), Query Frame = 0
Query:    1 MMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 162
            MM FV+E++GDAD VLL+TD+FE        R    +QIFE M  S +P+++AVNK+DLLP+           G L    L+ VG+L+DV+ RWQ  LP A+++PISA E  N  +L   LK  +P  PPL+  D ++DKP RFFA+E+IRE++F S+S+E+
Sbjct:  122 MMAFVKESLGDADVVLLMTDVFE------DPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPN------ATHPQGNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEI 271          
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A4D9DG82_9STRA (Era-type G domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG82_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.580e-36
Identity = 74/162 (45.68%), Postives = 105/162 (64.81%), Query Frame = 0
Query:    1 MMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 162
            MM FV+E++GDAD VLL+TD+FE        R    +QIFE M  S +P+++AVNK+DLLP+           G L    L+ +G+L+DV+ RWQ  LP A+++PISA E  N   L   LK  +P  PPL+  D ++DKP RFFA+E+IRE++F S+S+E+
Sbjct:  262 MMAFVKESLGDADVVLLMTDVFE------DPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPN------ATHPQGNLGKDALERIGTLQDVVARWQAALPNASIIPISARECFNLDGLLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEI 411          
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A7S2XY85_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY85_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.460e-35
Identity = 79/167 (47.31%), Postives = 109/167 (65.27%), Query Frame = 0
Query:    1 MMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVG-SLEDVLLRWQDRLPGA-TVLPISALEGINTAQLAEELKLHIPEGP---PLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 162
            MM FV+ A+ DAD +LLVTD+FE DF          + + +R+  S  P+V+A+NKVDLL  +G G         LS   LKEVG SL+DV+ RW+++ P A ++LPISAL+GI+T  L EEL   +P  P   PLF  D ++DKP RFFA+E+IRE++F S+ QE+
Sbjct:  162 MMKFVKTAVADADVLLLVTDIFERDFPV--------QVLIDRLKRSKSPLVIAINKVDLLKGNGQGKP-------LSERALKEVGGSLDDVVARWREKFPDAKSILPISALQGIDTELLQEELVKQLPPSPNGEPLFPPDTLTDKPERFFASELIRERVFTSYGQEI 313          
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A6V1N8B9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N8B9_HETAK)

HSP 1 Score: 132 bits (331), Expect = 6.760e-34
Identity = 64/162 (39.51%), Postives = 105/162 (64.81%), Query Frame = 0
Query:    1 MMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 162
            MMNFV+ A+ + DA+LL+TD+FE +F            + +R+  +  P+++A+NK+D+L +           G++SA  L+EVG+LE ++ RWQ+  P A ++PISA+EG+ T +L   LK H+PEGPPL+  + ++D+  RF   E+IRE++F S+ QE+
Sbjct:  159 MMNFVRGAIKECDALLLMTDIFEKEFPVDI--------LLDRVKRAKVPLIIAINKIDMLET-----------GKMSAETLEEVGNLESIVTRWQESFPAAKIIPISAMEGLETDELVVALKQHLPEGPPLYPEETLTDRSERFIVGEMIREKVFTSYGQEI 301          
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A8J7QTN7_9BACT (GTPase Era n=1 Tax=Tidjanibacter sp. TaxID=1929085 RepID=A0A8J7QTN7_9BACT)

HSP 1 Score: 111 bits (277), Expect = 9.820e-27
Identity = 64/163 (39.26%), Postives = 94/163 (57.67%), Query Frame = 0
Query:    1 MMNFVQEAMGDADAVLLVTDLFEV-DFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 162
            MMNFV  A+ DAD +L VTD  E  D AS        ++I E++  SG P++VAVNK+D                      L +   LE V+ +WQ+RLP A V+P+SAL   N   L + +   +PEG P +  D ++D+P+RFFA+EIIRE+IF+++ +E+
Sbjct:   72 MMNFVIGALRDADVILYVTDTVEQGDEAS--------EEIVEKISLSGLPVIVAVNKID----------------------LSDPEKLEAVVAKWQERLPRAEVVPVSALHSFNVGGLFDRIVALLPEGEPYYDKDTLTDRPMRFFASEIIREKIFLNYEKEI 204          
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A074KSH1_9BACT (GTPase Era n=1 Tax=Anditalea andensis TaxID=1048983 RepID=A0A074KSH1_9BACT)

HSP 1 Score: 105 bits (262), Expect = 1.690e-24
Identity = 57/162 (35.19%), Postives = 90/162 (55.56%), Query Frame = 0
Query:    1 MMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 162
            MM+FV  ++ DAD +L VTDLFE D           + + E++  SG P+++ +NK+D                      L +   LEDV   W  R+  +TV+PISA EG NT ++ +E+   +P  PP +  + ++D+P RFFA+EIIRE+IF ++ +E+
Sbjct:   77 MMSFVNMSLEDADVILFVTDLFETDEEI--------EDVIEKINKSGVPVLLVINKID----------------------LSKENQLEDVTAYWTQRITASTVIPISATEGFNTERILQEILDRLPFHPPFYDKEELTDRPERFFASEIIREKIFNNYKKEI 208          
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A350NWB3_9FLAO (GTPase Era n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A350NWB3_9FLAO)

HSP 1 Score: 105 bits (262), Expect = 2.160e-24
Identity = 62/162 (38.27%), Postives = 85/162 (52.47%), Query Frame = 0
Query:    1 MMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 162
            MM FV+ A+ DAD +LLVTD++E D A P          F ++ A   P+ V +NK+DL   +                      ++E +   WQ RLP ATV PISAL G N   L E +   +P  PP F  D +++KP+RFF +EIIRE+I   F QE+
Sbjct:   91 MMKFVKTALQDADLILLVTDIYEDDLAHPDT--------FTKIAAMDIPVFVLINKIDLTDQE---------------------KAMERIAF-WQARLPRATVAPISALHGFNVDSLLERIVEKLPVSPPYFPKDELTNKPMRFFISEIIREKILTHFKQEI 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGT2_ECTSI4.960e-7375.93PEra, plastid Era GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KDG7_9PHAE4.730e-7276.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C977_9STRA4.740e-4450.62PEra, plastid Era GTPase n=1 Tax=Tribonema minus T... [more]
W7U379_9STRA5.090e-3846.30Gtp-binding protein era n=1 Tax=Nannochloropsis ga... [more]
A0A4D9DG82_9STRA2.580e-3645.68Era-type G domain-containing protein n=1 Tax=Nanno... [more]
A0A7S2XY85_9STRA1.460e-3547.31Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1N8B9_HETAK6.760e-3439.51Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J7QTN7_9BACT9.820e-2739.26GTPase Era n=1 Tax=Tidjanibacter sp. TaxID=1929085... [more]
A0A074KSH1_9BACT1.690e-2435.19GTPase Era n=1 Tax=Anditalea andensis TaxID=104898... [more]
A0A350NWB3_9FLAO2.160e-2438.27GTPase Era n=1 Tax=Flavobacteriales bacterium TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..135
e-value: 2.8E-12
score: 48.5
NoneNo IPR availablePANTHERPTHR42698:SF2GTPASE ERA-LIKE, CHLOROPLASTICcoord: 1..162
NoneNo IPR availablePANTHERPTHR42698FAMILY NOT NAMEDcoord: 1..162
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80344contigH-elongata_contig80344:110..2701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80344.15685.1mRNA_H-elongata_contig80344.15685.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80344 98..2701 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80344.15685.1 ID=prot_H-elongata_contig80344.15685.1|Name=mRNA_H-elongata_contig80344.15685.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp
MMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPI
VVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPG
ATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEII
REQIFVSFSQEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase