prot_H-elongata_contig8025.15678.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8025.15678.1
Unique Nameprot_H-elongata_contig8025.15678.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length179
Homology
BLAST of mRNA_H-elongata_contig8025.15678.1 vs. uniprot
Match: D7FHG3_ECTSI (40S ribosomal protein S8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG3_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 8.610e-105
Identity = 154/178 (86.52%), Postives = 162/178 (91.01%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKFRALRLDTGNFSWGTEVRTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVAVGVKKGKKTPPKDEEEASKSDHVKRKLVKRQADRKLDSLLDEQFASGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKKKSK 178
            MGRPAA TKLGHKRVHPVRCRGGNMK+RALRLD+GNFSWGTEV T KTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFK WYE+HYGV +G+KKGKK  P +EE  +KSDHVKRKL KRQ DR L +LLDEQ ASGRFLACISSRPGQ GRCDGYILEGKELEFYQKMLAKKKSK
Sbjct:   29 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVVIGLKKGKKAAPVEEEAVAKSDHVKRKLAKRQTDRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKKKSK 206          
BLAST of mRNA_H-elongata_contig8025.15678.1 vs. uniprot
Match: A0A836CLT8_9STRA (40S ribosomal protein S8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT8_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.030e-88
Identity = 135/183 (73.77%), Postives = 154/183 (84.15%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKFRALRLDTGNFSWGTEVRTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVAVGVKKGK-----KTPPKDEEEASKSDHVKRKLVKRQADRKLDSLLDEQFASGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKKKSK 178
            +GRPAA TK+G  R+  VRCRGGN+KFRALRL+TGN+SWGTEV T KTRILDVVYNASNNELVRTKTLVK A+V +DA PF++WYE+HYG+A+GVKKGK     K     +EEA KSDHV+RKL  RQ  R LD+LLDEQFASGR LACISSRPGQ GRCDGYILEGKELEFYQK+L++KK K
Sbjct:   29 LGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGK 211          
BLAST of mRNA_H-elongata_contig8025.15678.1 vs. uniprot
Match: A0A7S2USH6_9STRA (40S ribosomal protein S8 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USH6_9STRA)

HSP 1 Score: 266 bits (680), Expect = 5.570e-88
Identity = 133/179 (74.30%), Postives = 149/179 (83.24%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKFRALRLDTGNFSWGTEVRTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVAVGVKKGKKTPPKDE---EEASKSDHVKRKLVKRQADRKLDSLLDEQFASGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKKK 176
            MGRPAA TKLG KRVHPVRC GGNMK+RA+RL+ G +SWGTE  + K RILDVVYNASNNELVRTKTLVKNA+V++DAHPFK WYE+HYGV +G KKGK+ P KDE   E+A KS HV+RK+ KRQ DR L   LD+QF  GR LACISSRPGQ GR DGYILEGKELEFYQKMLA+KK
Sbjct:   49 MGRPAANTKLGTKRVHPVRCMGGNMKYRAMRLEAGTYSWGTEAISRKARILDVVYNASNNELVRTKTLVKNAVVLIDAHPFKAWYEAHYGVVIGKKKGKRMPKKDEADDEDAKKSSHVQRKIAKRQKDRTLMQNLDDQFVGGRLLACISSRPGQSGRADGYILEGKELEFYQKMLARKK 227          
BLAST of mRNA_H-elongata_contig8025.15678.1 vs. uniprot
Match: A0A7S1Z304_TRICV (40S ribosomal protein S8 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z304_TRICV)

HSP 1 Score: 256 bits (654), Expect = 1.900e-84
Identity = 128/175 (73.14%), Postives = 146/175 (83.43%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKFRALRLDTGNFSWGTEVRTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVAVGVKKGKKTPPKDEEEASKSDHVKRKLVKRQADRKLDSLLDEQFASGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKK 175
            +GRPAAMTK+G KRVH VRCRGGN+KFRALRLD+GNFSWGTEV T K RILDV YNASNNELVRTKTLVK AIV++DAHPFK+WYE+HYGV +GVKKG+K    DEE   KS+ V+RKL  RQ +R L+  LD QFASGR LA I+SRPGQCGRCDG +LEG EL FYQ+ +AKK
Sbjct:   29 LGRPAAMTKIGEKRVHEVRCRGGNLKFRALRLDSGNFSWGTEVCTRKVRILDVTYNASNNELVRTKTLVKGAIVLIDAHPFKEWYEAHYGVKIGVKKGQKAHA-DEEAPKKSERVQRKLAARQKNRTLEQPLDHQFASGRLLAKITSRPGQCGRCDGVVLEGAELHFYQRQMAKK 202          
BLAST of mRNA_H-elongata_contig8025.15678.1 vs. uniprot
Match: A0A7S2JRG2_9STRA (40S ribosomal protein S8 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JRG2_9STRA)

HSP 1 Score: 254 bits (649), Expect = 1.060e-83
Identity = 131/175 (74.86%), Postives = 142/175 (81.14%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKFRALRLDTGNFSWGTEVRTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVAVGVKKGKKTPPKDEEEASKSDHVKRKLVKRQADRKLDSLLDEQFASGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKK 175
            MGRPAAMTK+G KRV  VRCRGGNMK+RALRLDTGNFSWGTEV T K RILDV YNASNNELVRTKTLVK AIV+VD HPFK WYESHYGV  G++  K  PP DE+EA KS+HV+RKL  RQ  R L+  LD Q ASGRFLA I+SRPGQ GRCDG ILEG EL FYQKM+ KK
Sbjct:   29 MGRPAAMTKIGEKRVREVRCRGGNMKYRALRLDTGNFSWGTEVCTRKVRILDVTYNASNNELVRTKTLVKGAIVLVDCHPFKTWYESHYGVKTGLRGAK--PPVDEDEAKKSNHVQRKLAARQKTRSLEPTLDSQLASGRFLAKITSRPGQSGRCDGVILEGPELAFYQKMMHKK 201          
BLAST of mRNA_H-elongata_contig8025.15678.1 vs. uniprot
Match: A0A812SFI7_SYMMI (40S ribosomal protein S8 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SFI7_SYMMI)

HSP 1 Score: 254 bits (649), Expect = 1.340e-83
Identity = 127/176 (72.16%), Postives = 144/176 (81.82%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKFRALRLDTGNFSWGTEVRTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVAVGVKKGKKTPPKDEEEASKSDHVKRKLVKRQADRKLDSLLDEQFASGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKKK 176
            +GRP A TKLG  R+H VRCRGGN+KFRA+RLDTGNFSWG+EV T KTR+LDVVYNASNNELVRTKTLVKN+I+ VDA PF+ WYE HYGV VGVKK KKT  + E+   KS  ++RKL +RQ  R LD  LD+ F+SGR LACISSRPGQ GRCDGYILEGKEL+FY KML KKK
Sbjct:   29 LGRPPANTKLGASRIHTVRCRGGNLKFRAMRLDTGNFSWGSEVCTRKTRVLDVVYNASNNELVRTKTLVKNSIIQVDATPFRAWYEQHYGVKVGVKKAKKTAAEGEDTEKKSHSLQRKLAERQKTRTLDPALDDGFSSGRLLACISSRPGQSGRCDGYILEGKELDFYSKMLKKKK 204          
BLAST of mRNA_H-elongata_contig8025.15678.1 vs. uniprot
Match: B7FP80_PHATC (40S ribosomal protein S8 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FP80_PHATC)

HSP 1 Score: 251 bits (640), Expect = 2.840e-82
Identity = 126/177 (71.19%), Postives = 144/177 (81.36%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKFRALRLDTGNFSWGTEVRTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVAVGVKK--GKKTPPKDEEEASKSDHVKRKLVKRQADRKLDSLLDEQFASGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKK 175
            +GRPAAMTK+G  R+HPVRCRGGNMKFRALRLD+GNFSWGTEV T K R+LDV YNASNNELVRTKTLVK AIV++DAHPFK WY+SHYGV +G+KK  G+       +   KS  V++KL  RQA+R LDS+LD QFASGR LA I+SRPGQ GRCDGYILEG EL FYQK +AKK
Sbjct:   29 LGRPAAMTKIGEPRIHPVRCRGGNMKFRALRLDSGNFSWGTEVCTRKVRVLDVTYNASNNELVRTKTLVKGAIVLIDAHPFKNWYDSHYGVTIGLKKTGGEDRTQPSVDLTEKSTQVQKKLKSRQANRSLDSVLDHQFASGRLLAKITSRPGQTGRCDGYILEGAELAFYQKQMAKK 205          
BLAST of mRNA_H-elongata_contig8025.15678.1 vs. uniprot
Match: A0A7M5V503_9CNID (40S ribosomal protein S8 n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5V503_9CNID)

HSP 1 Score: 250 bits (638), Expect = 6.320e-82
Identity = 124/180 (68.89%), Postives = 147/180 (81.67%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKFRALRLDTGNFSWGTEVRTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVAVGVKKGKKTPPKDEEEASK--SDHVKRKLVKRQADRKLDSLLDEQFASGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKKKSK 178
            +GRPAA TK+G KR+HPVRCRGGN+KFRA+RLD GN+SWG+E  T KTR+LDVVYNASNNELVRTKTLVKNAI+++DA PFK+W+E+HYGVAVG KKG K P  +E+  +K  S H K K+  R+ D K+D  L+EQF SGR +ACISSRPGQ GRCDGYILEGKEL+FY K L  KK K
Sbjct:   29 LGRPAANTKIGVKRIHPVRCRGGNLKFRAMRLDAGNYSWGSESITRKTRVLDVVYNASNNELVRTKTLVKNAIILIDATPFKQWFEAHYGVAVGRKKGHKIPEGEEDPLNKTRSKHAKAKIAARKPDSKIDHHLEEQFTSGRVMACISSRPGQSGRCDGYILEGKELDFYLKKLKTKKGK 208          
BLAST of mRNA_H-elongata_contig8025.15678.1 vs. uniprot
Match: A0A485KRP7_9STRA (40S ribosomal protein S8 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRP7_9STRA)

HSP 1 Score: 245 bits (625), Expect = 2.130e-80
Identity = 127/178 (71.35%), Postives = 141/178 (79.21%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKFRALRLDTGNFSWGTEVRTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVAVGVKKGKKTPPKDEEEASKSDHVKRKLVKRQADRKLDSLLDEQFASGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKKKSK 178
            MGR  A TKLG KRV+PVR RGGNMKFRALRLDTGNFSWGTE    KTR+L V+YNASNNELVRT TLVKNAI+ +DA PF++WYE+HYGV +GVKK  +     EEE  +S HV+RKL  RQ  R+LD  LDEQF  GR LACISSRPGQ GRCDGYILEGKELEFYQ+ LA KK K
Sbjct:    1 MGRQPANTKLGAKRVNPVRVRGGNMKFRALRLDTGNFSWGTEAIAHKTRVLIVLYNASNNELVRTNTLVKNAIIQIDATPFRQWYEAHYGVKIGVKKSAEADK--EEEVKQSSHVQRKLAARQRTRELDPRLDEQFQQGRLLACISSRPGQSGRCDGYILEGKELEFYQRKLATKKQK 176          
BLAST of mRNA_H-elongata_contig8025.15678.1 vs. uniprot
Match: A0A7S3JYM8_9STRA (40S ribosomal protein S8 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYM8_9STRA)

HSP 1 Score: 246 bits (628), Expect = 2.740e-80
Identity = 129/183 (70.49%), Postives = 145/183 (79.23%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKFRALRLDTGNFSWGTEVRTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVAVGVKK-GKKTPPKDEE------EASKSDHVKRKLVKRQADRKLDSLLDEQFASGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKKK 176
            +GR  AMTK+G KRVH VR RGGN K+RA+RL++GNFSWG+EV T KTRILDVVYNASNNELVRTKTLVK AIV++DAHP K WYE HYGV +G KK G+K   +DEE        SKS HV RKL +RQ  R LD  LD+QFA+GR LAC+SSRPGQCGRCDGYILEGKELEFYQK L  KK
Sbjct:   29 LGRQPAMTKIGEKRVHVVRGRGGNNKYRAIRLESGNFSWGSEVCTRKTRILDVVYNASNNELVRTKTLVKGAIVLIDAHPLKSWYEQHYGVEIGKKKRGQKKSAEDEEALKKKLNESKSSHVLRKLSQRQKTRVLDPSLDDQFAAGRLLACVSSRPGQCGRCDGYILEGKELEFYQKKLQAKK 211          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8025.15678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHG3_ECTSI8.610e-10586.5240S ribosomal protein S8 n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CLT8_9STRA1.030e-8873.7740S ribosomal protein S8 n=1 Tax=Tribonema minus T... [more]
A0A7S2USH6_9STRA5.570e-8874.3040S ribosomal protein S8 n=1 Tax=Fibrocapsa japoni... [more]
A0A7S1Z304_TRICV1.900e-8473.1440S ribosomal protein S8 n=1 Tax=Trieres chinensis... [more]
A0A7S2JRG2_9STRA1.060e-8374.8640S ribosomal protein S8 n=1 Tax=Leptocylindrus da... [more]
A0A812SFI7_SYMMI1.340e-8372.1640S ribosomal protein S8 n=1 Tax=Symbiodinium micr... [more]
B7FP80_PHATC2.840e-8271.1940S ribosomal protein S8 n=2 Tax=Phaeodactylum tri... [more]
A0A7M5V503_9CNID6.320e-8268.8940S ribosomal protein S8 n=2 Tax=Clytia hemisphaer... [more]
A0A485KRP7_9STRA2.130e-8071.3540S ribosomal protein S8 n=1 Tax=Aphanomyces stell... [more]
A0A7S3JYM8_9STRA2.740e-8070.4940S ribosomal protein S8 n=1 Tax=Aureoumbra lagune... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001047Ribosomal protein S8eTIGRFAMTIGR00307TIGR00307coord: 1..162
e-value: 2.6E-32
score: 109.6
IPR001047Ribosomal protein S8ePANTHERPTHR1039440S RIBOSOMAL PROTEIN S8coord: 1..177
NoneNo IPR availableGENE3D2.40.10.450coord: 100..177
e-value: 4.8E-19
score: 70.4
coord: 4..99
e-value: 6.9E-31
score: 108.6
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 1..160
e-value: 7.9E-42
score: 142.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8025contigH-elongata_contig8025:3272..7464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8025.15678.1mRNA_H-elongata_contig8025.15678.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8025 3272..8242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8025.15678.1 ID=prot_H-elongata_contig8025.15678.1|Name=mRNA_H-elongata_contig8025.15678.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=179bp
MGRPAAMTKLGHKRVHPVRCRGGNMKFRALRLDTGNFSWGTEVRTCKTRI
LDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVAVGVKKGKK
TPPKDEEEASKSDHVKRKLVKRQADRKLDSLLDEQFASGRFLACISSRPG
QCGRCDGYILEGKELEFYQKMLAKKKSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001047Ribosomal_S8e
IPR022309Ribosomal_S8e/biogenesis_NSA2