prot_H-elongata_contig80064.15664.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80064.15664.1
Unique Nameprot_H-elongata_contig80064.15664.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length162
Homology
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BLAST of mRNA_H-elongata_contig80064.15664.1 vs. uniprot
Match: D7FYV8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYV8_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 5.640e-50
Identity = 92/146 (63.01%), Postives = 114/146 (78.08%), Query Frame = 0 
Query:   12 QKGASALRALADELKTEQAISSYANKVADELAQIFEVEEEKAAKQIEKRKVPVKAKLEKATVELEEAMADAEEARRAFEGDLLLQLFSFRSKGPLRQGALVGAITMANQAVYQLILLVDDRGGSLTIALVGSVASAALVWFYGYRP 157
            +KG SALR LA+ELKT++   SYA+++A ELA++ +VEE+KAA +IE+R+ PVKAKL+KAT      +A AEEARR FEGD +LQL SFR KG LRQ A VGA+ +ANQAVYQ IL+ DDRGG+   AL G  ASAALVW+YGYRP
Sbjct:  202 EKGTSALRELAEELKTDEGAVSYADRMAQELAELLQVEEDKAAAEIERRQAPVKAKLDKATXXXXXXVAAAEEARREFEGDFVLQLMSFRQKGVLRQAAFVGAVLIANQAVYQAILVADDRGGNPAFALGGLAASAALVWYYGYRP 347
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80064.15664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYV8_ECTSI5.640e-5063.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 130..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..161
NoneNo IPR availableTMHMMTMhelixcoord: 133..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80064contigH-elongata_contig80064:248..733 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80064.15664.1mRNA_H-elongata_contig80064.15664.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80064 248..733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80064.15664.1 ID=prot_H-elongata_contig80064.15664.1|Name=mRNA_H-elongata_contig80064.15664.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=162bp
MRAPPSVPWEPQKGASALRALADELKTEQAISSYANKVADELAQIFEVEE
EKAAKQIEKRKVPVKAKLEKATVELEEAMADAEEARRAFEGDLLLQLFSF
RSKGPLRQGALVGAITMANQAVYQLILLVDDRGGSLTIALVGSVASAALV
WFYGYRPFSLK*
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