prot_H-elongata_contig80016.15659.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig80016.15659.1
Unique Name	prot_H-elongata_contig80016.15659.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	76

Homology

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BLAST of mRNA_H-elongata_contig80016.15659.1 vs. uniprot
Match: A0A0U2LTP8_9PHAE (ATP synthase subunit 9, mitochondrial n=153 Tax=Stramenopiles TaxID=33634 RepID=A0A0U2LTP8_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 9.460e-36
Identity = 72/75 (96.00%), Postives = 72/75 (96.00%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKDELFRIAILGFALKEEIALFALMMAFLILFAL 75
            MLVQAAKLLGAGLATIGLAGAGVGIGTVF ALVLGTARNPSLKDELFRIAILGFAL E IALFALMMAFLILFAL
Sbjct:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFAALVLGTARNPSLKDELFRIAILGFALTEAIALFALMMAFLILFAL 75

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BLAST of mRNA_H-elongata_contig80016.15659.1 vs. uniprot
Match: Q3S284_THAPS (ATP synthase subunit 9, mitochondrial n=16 Tax=Bacillariophyta TaxID=2836 RepID=Q3S284_THAPS)

HSP 1 Score: 115 bits (289), Expect = 2.150e-32
Identity = 64/75 (85.33%), Postives = 71/75 (94.67%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKDELFRIAILGFALKEEIALFALMMAFLILFAL 75
            ML+QAAK +GAGLATIGLAGAGVGIGTVFGALV+G +RNPSLKDELF++AILGFAL E IALF+LMMAFLILFAL
Sbjct:    1 MLLQAAKFVGAGLATIGLAGAGVGIGTVFGALVIGVSRNPSLKDELFKLAILGFALTEAIALFSLMMAFLILFAL 75

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BLAST of mRNA_H-elongata_contig80016.15659.1 vs. uniprot
Match: A0A8F0FD85_9PHAE (ATP synthase subunit 9, mitochondrial n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FD85_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 3.050e-32
Identity = 64/75 (85.33%), Postives = 70/75 (93.33%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKDELFRIAILGFALKEEIALFALMMAFLILFAL 75
            MLVQA+K+LGAGLATIGL GAGVGIGTVFGALVLG +RNP+LKDELF+ AILGFAL E IALFALMMAFLILFA+
Sbjct:    1 MLVQASKILGAGLATIGLTGAGVGIGTVFGALVLGVSRNPTLKDELFKFAILGFALTEAIALFALMMAFLILFAI 75

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BLAST of mRNA_H-elongata_contig80016.15659.1 vs. uniprot
Match: A0A2U9GIF0_9STRA (ATP synthase subunit 9, mitochondrial n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2U9GIF0_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.510e-31
Identity = 62/74 (83.78%), Postives = 70/74 (94.59%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKDELFRIAILGFALKEEIALFALMMAFLILFA 74
            ML+QAAK +GAGLATIGLAGAGVGIGTVFGALV+G +RNPSLKDE+FR+AILGFAL E IALFALM+AFL+LFA
Sbjct:    1 MLLQAAKCVGAGLATIGLAGAGVGIGTVFGALVIGISRNPSLKDEMFRMAILGFALTEAIALFALMIAFLVLFA 74

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BLAST of mRNA_H-elongata_contig80016.15659.1 vs. uniprot
Match: A0A649UBP4_AURAN (ATP synthase subunit 9, mitochondrial n=3 Tax=cellular organisms TaxID=131567 RepID=A0A649UBP4_AURAN)

HSP 1 Score: 111 bits (278), Expect = 1.020e-30
Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKDELFRIAILGFALKEEIALFALMMAFLILFAL 75
            M++QAAKL+GAGL+TIGL GAGVGIG+VF AL+LG +RNPSLKDELFR+AILGFAL E IALFALMM FLILFAL
Sbjct:    1 MILQAAKLIGAGLSTIGLVGAGVGIGSVFAALILGISRNPSLKDELFRVAILGFALTEAIALFALMMGFLILFAL 75

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BLAST of mRNA_H-elongata_contig80016.15659.1 vs. uniprot
Match: D2Z269_HETAK (ATP synthase subunit 9, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=D2Z269_HETAK)

HSP 1 Score: 111 bits (277), Expect = 1.450e-30
Identity = 62/74 (83.78%), Postives = 68/74 (91.89%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKDELFRIAILGFALKEEIALFALMMAFLILFA 74
            ML+QAAK +GAGLATIGLAGAGVGIGTVF ALVLGT+RNPS+KD+LFR AILGFAL E  ALFALM+AFLILFA
Sbjct:    1 MLLQAAKFVGAGLATIGLAGAGVGIGTVFSALVLGTSRNPSIKDDLFRFAILGFALTEATALFALMVAFLILFA 74

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BLAST of mRNA_H-elongata_contig80016.15659.1 vs. uniprot
Match: A0A1J0RD98_9STRA (ATP synthase subunit 9, mitochondrial n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A1J0RD98_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.450e-30
Identity = 62/75 (82.67%), Postives = 69/75 (92.00%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKDELFRIAILGFALKEEIALFALMMAFLILFAL 75
            ML+QAAK +GAGLATIGLAGAG GIGTVFG+LVLG +RNP LKDELF++AILGFAL E IALFALM+AFLILFAL
Sbjct:    1 MLLQAAKCIGAGLATIGLAGAGAGIGTVFGSLVLGISRNPKLKDELFKMAILGFALTEAIALFALMIAFLILFAL 75

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BLAST of mRNA_H-elongata_contig80016.15659.1 vs. uniprot
Match: A0A8E8U4W3_9PHAE (ATP synthase subunit 9, mitochondrial n=2 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8U4W3_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 2.070e-30
Identity = 58/75 (77.33%), Postives = 71/75 (94.67%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKDELFRIAILGFALKEEIALFALMMAFLILFAL 75
            ML+QA+KL+G GLATIGL GAGVGIGTVFG+L++GT+RNPS+K+ELF++A+LGFAL E IALFALM+AFLILFAL
Sbjct:    1 MLLQASKLIGGGLATIGLTGAGVGIGTVFGSLIIGTSRNPSMKEELFKLAVLGFALTEAIALFALMVAFLILFAL 75

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BLAST of mRNA_H-elongata_contig80016.15659.1 vs. uniprot
Match: A0A4Y5T8G9_9PHAE (ATP synthase subunit 9, mitochondrial n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A4Y5T8G9_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 4.170e-30
Identity = 61/75 (81.33%), Postives = 70/75 (93.33%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKDELFRIAILGFALKEEIALFALMMAFLILFAL 75
            M  ++A+L+GAGLATIGLAGAGVGIGTVFGALVLGTARNPS+K++LFR AILGFAL E IALFALMMAFLILF++
Sbjct:    1 MSYRSAQLIGAGLATIGLAGAGVGIGTVFGALVLGTARNPSIKNDLFRFAILGFALTEAIALFALMMAFLILFSI 75

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BLAST of mRNA_H-elongata_contig80016.15659.1 vs. uniprot
Match: A0A5B9IQ06_9STRA (ATP synthase subunit 9, mitochondrial n=1 Tax=Cafileria marina TaxID=2557541 RepID=A0A5B9IQ06_9STRA)

HSP 1 Score: 109 bits (272), Expect = 8.420e-30
Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKDELFRIAILGFALKEEIALFALMMAFLILF 73
            ML+ AAKL+GAGLATIGLAGAGVGIG VFG+LVLG +RNP+ KDELFR+AILGFAL E IALFALMMAFLILF
Sbjct:    1 MLLSAAKLIGAGLATIGLAGAGVGIGNVFGSLVLGVSRNPNEKDELFRLAILGFALTEAIALFALMMAFLILF 73

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig80016.15659.1 vs. uniprot

BLAST of mRNA_H-elongata_contig80016.15659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0U2LTP8_9PHAE	9.460e-36	96.00	ATP synthase subunit 9, mitochondrial n=153 Tax=St...	[more]
Q3S284_THAPS	2.150e-32	85.33	ATP synthase subunit 9, mitochondrial n=16 Tax=Bac...	[more]
A0A8F0FD85_9PHAE	3.050e-32	85.33	ATP synthase subunit 9, mitochondrial n=1 Tax=Prot...	[more]
A0A2U9GIF0_9STRA	2.510e-31	83.78	ATP synthase subunit 9, mitochondrial n=3 Tax=Euka...	[more]
A0A649UBP4_AURAN	1.020e-30	81.33	ATP synthase subunit 9, mitochondrial n=3 Tax=cell...	[more]
D2Z269_HETAK	1.450e-30	83.78	ATP synthase subunit 9, mitochondrial n=1 Tax=Hete...	[more]
A0A1J0RD98_9STRA	1.450e-30	82.67	ATP synthase subunit 9, mitochondrial n=4 Tax=Baci...	[more]
A0A8E8U4W3_9PHAE	2.070e-30	77.33	ATP synthase subunit 9, mitochondrial n=2 Tax=Phae...	[more]
A0A4Y5T8G9_9PHAE	4.170e-30	81.33	ATP synthase subunit 9, mitochondrial n=1 Tax=Ishi...	[more]
A0A5B9IQ06_9STRA	8.420e-30	83.56	ATP synthase subunit 9, mitochondrial n=1 Tax=Cafi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000454	ATP synthase, F0 complex, subunit C	PRINTS	PR00124	ATPASEC	coord: 30..45 score: 44.3 coord: 9..28 score: 54.41 coord: 47..72 score: 52.19
IPR000454	ATP synthase, F0 complex, subunit C	PANTHER	PTHR10031	ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL	coord: 3..74
IPR000454	ATP synthase, F0 complex, subunit C	HAMAP	MF_01396	ATP_synth_c_bact	coord: 4..72 score: 13.964
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 9..71 e-value: 5.7E-11 score: 42.6
IPR038662	F1F0 ATP synthase subunit C superfamily	GENE3D	1.20.20.10		coord: 1..75 e-value: 1.3E-30 score: 107.2
None	No IPR available	PANTHER	PTHR10031:SF14	ATP SYNTHASE, SUBUNIT C, ISOFORM A	coord: 3..74
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 35..45
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 46..74
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..34
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 75..75
None	No IPR available	TMHMM	TMhelix		coord: 50..72
None	No IPR available	TMHMM	TMhelix		coord: 15..37
IPR020537	ATP synthase, F0 complex, subunit C, DCCD-binding site	PROSITE	PS00605	ATPASE_C	coord: 37..58
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 2..74

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig80016	contig	H-elongata_contig80016:1237..1464 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig80016.15659.1	mRNA_H-elongata_contig80016.15659.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig80016 1194..1584 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig80016.15659.1 ID=prot_H-elongata_contig80016.15659.1|Name=mRNA_H-elongata_contig80016.15659.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKDELFRIA
ILGFALKEEIALFALMMAFLILFAL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000454	ATP_synth_F0_csu
IPR002379	ATPase_proteolipid_c-like_dom
IPR038662	ATP_synth_F0_csu_sf
IPR020537	ATP_synth_F0_csu_DDCD_BS
IPR035921	F/V-ATP_Csub_sf