prot_H-elongata_contig80.15655.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig80.15655.1
Unique Nameprot_H-elongata_contig80.15655.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length97
Homology
BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.070e-13
Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 0
Query:    4 LRKVVFIGQSGAGKTSLIKSIKAGEG--QLALEKELESVGVSVQDHMFENRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWDAFRFMDQT 97
            L KVV +G S AGKTSL+ SI  G G   +    E+ +VG+ +  H  +      T V+ YD AGQV+YYG++Q F+T RA+Y+LVWD  R   +T
Sbjct:  223 LLKVVLVGSSQAGKTSLVNSIVEGRGLPTVGTPAEVSTVGIELLRHNLQG-----TAVEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKT 313          
BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 2.000e-13
Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 0
Query:    3 DLRKVVFIGQSGAGKTSLIKSI--KAGEGQLALEKELESVGVSVQDHMFENRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWDAFR 92
            ++ KVV IG  GAGKTSL+ SI  + G   +   +E+ +VG+ ++ H      +    V+ YD AGQV+YYG++Q F+T RA+Y+LVWD  R
Sbjct:  383 NVLKVVLIGSPGAGKTSLLNSIVNERGSRTVGTSEEVSTVGIELRRH----HQRNGRIVEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSR 470          
BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: A0A6H5JRW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 5.030e-13
Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    6 KVVFIGQSGAGKTSLIKSIKAGEGQLALEKELES-VGVSVQDHMFENR-HKGDTH-VKLYDLAGQVEYYGLYQLFITERAVYVLVWDA 90
            KVV +G    GKTSL  SIKAG+  +     ++S V V VQDH  + + HK   H ++++D AGQ  YYGL QLF+T RAVY+LVWDA
Sbjct:   70 KVVIVGMETVGKTSLRCSIKAGKPCMTRGGGVDSTVHVDVQDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDA 157          
BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 4.530e-12
Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    6 KVVFIGQSGAGKTSLIKSIKAGEGQLALEKELES-VGVSVQDHMFENRHKGDTH-VKLYDLAGQVEYYGLYQLFITERAVYVLVWDA 90
            KVV IG+   GKTSL +SI  G   +     +ES V V V+DH      K D H ++++D AGQV YYGL QLF+T RAVY+LVWDA
Sbjct:  450 KVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDH------KVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDA 530          
BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 4.540e-12
Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    6 KVVFIGQSGAGKTSLIKSIKAGEGQLALEKELES-VGVSVQDHMFENRHKGDTH-VKLYDLAGQVEYYGLYQLFITERAVYVLVWDA 90
            KVV IG+   GKTSL +SI  G   +     +ES V V V+DH      K D H ++++D AGQV YYGL QLF+T RAVY+LVWDA
Sbjct:  543 KVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDH------KVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDA 623          
BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 8.410e-12
Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    6 KVVFIGQSGAGKTSLIKSIKAGEGQLALEKELES-VGVSVQDHMFENRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWDA 90
            KVV +G+   GKTSL +SIK G+  +      ES V V V+DH  +        ++++D AGQV YYGL QLF+T RAVY+LVWDA
Sbjct:  378 KVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEESTVHVDVEDHDLDGHP-----IRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDA 458          
BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: A0A6H5JQZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ5_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 3.310e-10
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 0
Query:    6 KVVFIGQSGAGKTSLIKSIKAGEGQLALEKELES-VGVSVQDHMFENR-HKGDTH-VKLYDLAGQVEYYGLYQLFITERAVYVLVWDA 90
            KVV +G    GKTS    IKAG+  +     ++S V V V+DH  + + HK   H ++++D AGQ  YYGL QLF+T RAVY+LVWDA
Sbjct:  236 KVVIVGTETVGKTS----IKAGKPCMTRGGGVDSTVHVDVEDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDA 319          
BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 4.810e-10
Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 0
Query:    6 KVVFIGQSGAGKTSLIKSIKAGEGQLALE-KELESVGVSVQDHMFENRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWDAFRFMDQT 97
            KVV +GQ GAGKTSL +S+KA E     E KE  +V   V+    E      + V++YD AGQV Y GL Q+F+T RAV VLV +A +F  QT
Sbjct:  195 KVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEG-----SSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQT 282          
BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.070e-8
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 0
Query:    3 DLRKVVFIGQSGAGKTSLIKSIKAGEGQLA--LEKELESVGVSVQDHMFENRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWD 89
             L KVV +G + AGKTSL+ SI AG G        +  +VG+ ++    +     DT V+ +D AGQV+Y G++Q F+T RA+Y+LV D
Sbjct:   69 QLLKVVLVGSASAGKTSLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQ-----DTKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVD 152          
BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.500e-8
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 0
Query:    6 KVVFIGQSGAGKTSLIKSIKAGEGQLALE-KELESVGVSVQDHMFENRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWDAFRFMDQ 96
            K++ +GQ GAGKTSL KS+KA E     E KE  +V   V+    E      + +++YD AGQV Y GL Q+F+T RAV V+V +A  F  Q
Sbjct:  338 KIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEG-----SSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQ 424          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80.15655.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW02_9PHAE1.070e-1344.79Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVX5_ECTSI2.000e-1343.48LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JRW5_9PHAE5.030e-1351.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX56_ECTSI4.530e-1251.72LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX69_ECTSI4.540e-1251.72LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FJV1_ECTSI8.410e-1248.84LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JQZ5_9PHAE3.310e-1047.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSZ8_9PHAE4.810e-1048.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8T1_9PHAE1.070e-841.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUD0_ECTSI1.500e-844.57LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 5..97
e-value: 1.3E-16
score: 62.5
NoneNo IPR availablePFAMPF08477Roccoord: 6..91
e-value: 2.6E-14
score: 53.5
IPR020859Roc domainPROSITEPS51424ROCcoord: 1..97
score: 20.469
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80contigH-elongata_contig80:3538..7346 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80.15655.1mRNA_H-elongata_contig80.15655.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig80 3538..7348 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig80.15655.1 ID=prot_H-elongata_contig80.15655.1|Name=mRNA_H-elongata_contig80.15655.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp
IFDLRKVVFIGQSGAGKTSLIKSIKAGEGQLALEKELESVGVSVQDHMFE
NRHKGDTHVKLYDLAGQVEYYGLYQLFITERAVYVLVWDAFRFMDQT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020859ROC_dom
IPR027417P-loop_NTPase