prot_H-elongata_contig8.15654.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8.15654.1
Unique Nameprot_H-elongata_contig8.15654.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length747
Homology
BLAST of mRNA_H-elongata_contig8.15654.1 vs. uniprot
Match: D7G5M2_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M2_ECTSI)

HSP 1 Score: 514 bits (1324), Expect = 8.120e-168
Identity = 335/779 (43.00%), Postives = 437/779 (56.10%), Query Frame = 0
Query:    1 VFNDTTSSPDLSAVQCDVGSTYVAEETAFVGFEGEAVVYSEGTLYLDDCDFSSSSASMLVYSDPGSSAVIRNTVLGDNNFESVIQDAFEASDFPVNGTLINVALTCS-----ESGSPCSLGSICLEGELGVYCQCYHRFSTSEEARKWMRTCLDGHSKGLLLSEKKSPPITFYPSLLEGDLVVGLDDDGSRAFSTST--ISPMMTSNRSILGGVVWNASAIF----HELISWTLFPSVGLLYPGRNITVRVVSSPDARLDGTITAMFAAEGIGTPEESFHATSSGLTQGKVKEDVHASATLDYSSGSGVSVRQDMSITFFHCRPGNFWNLSIPSNGHAASC-DLCSSIEEGDIKGLDCSAPGASTLKLPIRSGYWRASLNSITIRECFNKGACVGGSTVGSVEEYCGIGYEGPYCAVCSSGYGDGSGNSCHKCTAEFQGVMHFLFALAVLITFIVFLLLGIYLVGGRVAISHTVSATKESARNLHRRGSELLLCSEARGRKDMSVSTFVSSDNWQAGLKARLRGVGVSSDRYSSENGNELVP----RRSGRVNEKPGLASASTSRRAKALASAIS--------PVPARKVP----PPPESPSVDSR--GVDSSRVAHPSP--FEKRGSGGFEETIAPAQSCSNRGDGYMKDAVHEHNGERKKESGGGKSYAKKYDENKKTTAAVFGGVFGTFPLSKLKIVIVVWQISRAFTEITDVPFPEVYDNFLSFIGIFSLDLGWIMSAACLTVGLDFYDKLLIVTIGPVFLLGLLCITFYVGARP 747
            VF DT  S DLSAVQ D  S+Y AEET+FVGF G+AVV+SEGTLYLDDC+FS SSAS+LVYS+  SS V+RN VLGD N+  V + A  A+  P   +LINV +TC       S  PCS GS C++G+LGVYCQCY R S+  +      TC+ G    L L+    P    +P++L+G+L++ L+DD +   S+S       +++     GGV+WN SA+       L+ WT+FPS GLL PGR+IT+ VV+ P    +G  T  F A+G+  P       ++ +        V  ++  D   G G        ++F HC  G +WN S    G + SC +LC+ +  GD  G++C   GA+T  LP++ GYWRASL+S  IR+CFN+ AC GG  V S +EYC  GYEGP CAVC+SGYG G  N+CH CTA F+G M+F+  +  L+TF V  LL +YLVGGR A+S+T++ T+E AR L RRGS LL       R D   S   S  +   G  A L+ VG  SD   S      +     R+S  +   P  A+A+++  A    S+++        P  A  V     PP  SP+  +       S + HP+    +K G          + S  +        AV       K   G                AA  G +    PLSKLKIV+VVWQIS AF EIT VPFP VY+ FLS IGIFS DLGW+MSAACLT G+DFYDKLLIVTIGPV LL LL  TFY+GARP
Sbjct:    8 VFTDTGGSSDLSAVQADEDSSYKAEETSFVGFAGDAVVFSEGTLYLDDCNFSGSSASVLVYSEGNSSTVVRNAVLGDYNYFDVAEAASTANVIPTAHSLINVNVTCDGWMPFSSTPPCSEGSPCIDGDLGVYCQCYTRESSIAKGSP-SETCVTGDPGLLSLTVLSEPADAVFPTMLDGELLLTLNDDETVTTSSSAGGSGVALSAGAGTEGGVIWNVSALLLSSEEGLMEWTVFPSTGLLLPGRSITLHVVTLPSEDFNGEATVSFQADGMSPPASLVAKAAAAVV-------VQTTSLAD--DGEGEIAAASFDVSFVHCESGTYWNNSCDPEGDSVSCCELCTDVG-GDEDGVNCEIDGATTRTLPVQPGYWRASLDSDYIRQCFNEDACQGGRIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLGVTALLTFFVAALLAVYLVGGRGAVSNTLTNTREWARTLQRRGSGLLRWEGTTRRFDFRASGGGSEGHPTKGSGA-LKSVGEESDGGESGGTGRFMGVWGRRKSASIGAPPPGATATSAAAATGPLSSVTDIKGGGSKPDSAGAVGAGFVPPARSPAAAAAWDAAAGSALVHPTMRRADKEGEADASNNTVGSSSSGSGLQSCAAPAVRGPGSGGKGACGXXXXXXXXXXXXXXXXAARVGEMLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMMSAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARP 774          
BLAST of mRNA_H-elongata_contig8.15654.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI)

HSP 1 Score: 521 bits (1341), Expect = 7.740e-165
Identity = 350/808 (43.32%), Postives = 449/808 (55.57%), Query Frame = 0
Query:    1 VFNDTTSSPDLSAVQCDVGSTYVAEETAFVGFEGEAVVYSEGTLYLDDCDFSSSSASMLVYSDPGSSAVIRNTVLGDNNFESVIQDAFEASDFPVNGTLINVALTCS-----ESGSPCSLGSICLEGELGVYCQCYHRFSTSEEARKWMRTCLDGHSKGLLLSEKKSPPITFYPSLLEGDLVVGLDDDGSRAFSTST--ISPMMTSNRSILGGVVWNASAIFHEL----ISWTLFPSVGLLYPGRNITVRVVSSPDARLDGTITAMFAAEGIGTPEESFHATSSGLTQGKVKEDVHASATLDYSSGSGVSVRQDMSITFFHCRPGNFWNLSIPSNGHAASC-DLCSSIEEGDIKGLDCSAPGASTLKLPIRSGYWRASLNSITIRECFNKGACVGGSTVGSVEEYCGIGYEGPYCAVCSSGYGDGSGNSCHKCTAEFQGVMHFLFALAVLITFIVFLLLGIYLVGGRVAISHTVSATKESARNLHRRGSELLLCSEARGRKDMSVSTFVSSDNWQAGLKAR--LRGVGVSSDRYSSENGNELVPRRSGRVNEKPGLASASTSRRAKALASAISPVPARKVPPPPESPSVDSRG----VDS-------------SRVAHPSPFEKRG-----------------------------SG-GFEETIAPAQSCSNRGDGYMKDAVHEHNGERKKESGGGKSYAKKYDENKKTTAAVFGGVFGTFPLSKLKIVIVVWQISRAFTEITDVPFPEVYDNFLSFIGIFSLDLGWIMSAACLTVGLDFYDKLLIVTIGPVFLLGLLCITFYVGARP 747
            VF DT  SPDLSAVQ D  S+Y AE+T+FVGF G AVV+SEGTLYLD+C+FS S+AS+LVYS+  S+ V+RN VLGDNN+  V + A  A++ P   +LINV +TC       S SPCS GS C++G+LGVYCQCY R S+  E      TC+ G    L L+    P    YP++L+G+L+  L+DD +   S+ST      ++      GGV+WN SA+   L    + WT+FPS GLL PGR+IT+ VV+ P    +G  T  F A+G+  P     A                    D ++ S         ++FFHC  G +WN    + G + SC +LC+ ++ GD  G+DC   GA+T  LP++SGYWRASL+S+ IR+CFN+ AC GGS V S +EYC  GYEGP CAVC+SGYG G  N+CH CTA F+G M+F+ A+A L+T  V  LL +YLVGGR A+S+T++ T+ES R L +RGS LL       R D S S   SS  WQ   K    L+ VG  SD   S      +     R++   G+     +    A A+             P S   DS+G    +DS             SR A                                      SG G + + APA     RGDG  K A     G +++  GGG       D  KKT AA  G +    PLSKLKIV+VVWQIS AF E+T VPFP VY+ FLS IGIFS DLGW++SAACLT G+DFYDKLLIVTIGPV LL LL  TFY+GARP
Sbjct:  274 VFTDTAGSPDLSAVQADEDSSYKAEDTSFVGFAGRAVVFSEGTLYLDECNFSGSTASVLVYSEGDSTTVVRNAVLGDNNYFDVAKAASTANEIPTAHSLINVNVTCDGWMPFSSTSPCSEGSPCIDGDLGVYCQCYTRESSIAEGSP-SETCVTGDPGLLNLTVLSEPADAVYPTMLDGELLATLNDDETVTTSSSTGGSGVAVSGGAGTEGGVIWNVSALPFSLGEGSMEWTVFPSTGLLLPGRSITLHVVTLPSEDFNGEATVSFQADGMSPPASP--AAEXXXXXXXXXXXXXXXXXXDTAAAS-------FDVSFFHCLEGTYWNNECDTGGDSDSCCELCTDLD-GDEDGVDCEDMGATTRTLPVQSGYWRASLDSVYIRQCFNEDACRGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVASLLTLFVVALLAVYLVGGRGAVSNTMTNTRESVRMLQKRGSGLLRSEGTTRRFDFSASGGWSS--WQHPTKGGDPLKSVGEESDGGESGGSGRFMGAWGRRMSASIGVPMRGAAITCAAAATG------------PSSSVNDSKGAGNKLDSAGTMGADFLPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGLQPSAAPAVRGP-RGDG--KGA----RGGQQQGMGGG-------DRKKKTAAARIGEMLARLPLSKLKIVVVVWQISNAFAEVTKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARP 1042          
BLAST of mRNA_H-elongata_contig8.15654.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI)

HSP 1 Score: 481 bits (1237), Expect = 9.030e-147
Identity = 318/778 (40.87%), Postives = 414/778 (53.21%), Query Frame = 0
Query:    1 VFNDTTSSPDLSAVQCDVGSTYVAEETAFVGFEGEAVVYSEGTLYLDDCDFSSSSASMLVYSDPGSSAVIRNTVLGDNNFESVIQDAFEASDFPVNGTLINVALTCS-----ESGSPCSLGSICLEGELGVYCQCYHRFSTSEEARKWMRTCLDGHSKGLLLSEKKSPPITFYPSLLEGDLVVGLDDDGSRAFSTST--ISPMMTSNRSILGGVVWNASAIF----HELISWTLFPSVGLLYPGRNITVRVVSSPDARLDGTITAMFAAEGIGTPEESFHATSSGLTQGKVKEDVHASATLDYSSGSGVSVRQDMSITFFHCRPGNFWNLSIPSNGHAASC-DLCSSIEEGDIKGLDCSAPGASTLKLPIRSGYWRASLNSITIRECFNKGACVGGSTVGSVEEYCGIGYEGPYCAVCSSGYGDGSGNSCHKCTAEFQGVMHFLFALAVLITFIVFLLLGIYLVGGRVAISHTVSATKESARNLHRRGSELLLCSEARGRKDMSVSTFVSSDNWQAGLKARLRGVGVSSDRYSSENGNELVP----RRSGRVNEKPGLASASTSRRAKALASAISPVPARKVPPPPESPSVDSRG--------VDSSRVAHPSPFEKRGSG------------------------------GFEETIAPAQSCSNRGDGYMKDAVHEHNGERKKESGGGKSYAKKYDENKKTTAAVFGGVFGTFPLSKLKIVIVVWQISRAFTEITDVPFPEVYDNFLSFIGIFSLDLGWIMSAACLTVGLDFYDKLL 724
            VF DT  S DLSAVQ D  S+Y AE+T+FVGF GEAVV+SEG LYLDDCDFS S+AS+LVYS+  S+ V+RN VLGDNN+  V + A EA D P   +LI+V +TC       S  PCS GS C++G+LGVYCQCY R S+  E      TC+ G    L L+    P    YP++L+GDL++ L+DD +   S+S       +++     GGV+WN SA+       L+ WT+FPS GLL PGR+IT+ VV+ P    +G  T  F A+G+  P       +S + +      V  ++  D   G G +      ++F HC  G +WN S    G + SC +LC+ ++ GD  G++C   GA+T  LPI+SGYWRASL+S+ IR+CFN+ AC GGS V S +EYC  GYEGP CAVC+SGYG G  N+CH CTA F+G M+F+ A+A L+T  V  LL +YLVGGR A+S T++ T+ES R L RRGS LL       R   S S   SS        + L+ VG  SD   S      +     R+S  +   P  A  ++S      +S+++   A            DS G        +  SR A                                         G + + APA     RG                                    AA  G +    PLSKLKIV+VVWQIS AF EIT VPFP VY+ FLS IGIFS DLGW++SAACLT G+DFYDKLL
Sbjct:  624 VFTDTEGSSDLSAVQADEDSSYKAEDTSFVGFAGEAVVFSEGILYLDDCDFSGSAASVLVYSERNSTTVVRNAVLGDNNYFDVAEAASEAGDIPTAHSLISVNVTCDGWMPFSSTPPCSEGSPCIDGDLGVYCQCYTRESSIAEGSP-SETCVTGDPGLLSLTVLSEPADAVYPTMLDGDLLLTLNDDETVTTSSSAGGSGVALSAGAGTEGGVIWNVSALVLSSEEGLMEWTVFPSTGLLLPGRSITLHVVTLPLDDFNGEATVSFQADGMSPP-------ASLVAEAAAAVVVQTTSLAD--DGEGETAAASFDVSFVHCESGTYWNNSCDPEGDSVSCCELCTDVD-GDEDGVNCDENGATTRTLPIQSGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFHFSASGGGSSGGHPTKGSSALKSVGEESDGGESGGSGRFLGAWGRRKSASIGAPPPGAITTSSAAGSGPSSSVNDKGAGS--------KADSAGTVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLQPSAAPAV----RGPXXXXXXXXXXXX----------XXXXXXXXXXXXXAARIGEMLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLL 1368          
BLAST of mRNA_H-elongata_contig8.15654.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE)

HSP 1 Score: 446 bits (1148), Expect = 8.890e-134
Identity = 315/811 (38.84%), Postives = 406/811 (50.06%), Query Frame = 0
Query:    1 VFNDTTSSPDLSAVQCDVGSTYVAEETAFVGFEGEAVVYSEGTLYLDDCDFSSSSASMLVYSDPGSSAVIRNTVLGDNNFESVIQDAFEASDFPVNGTLINVALTCS-----ESGSPCSLGSICLEGELGVYCQCYHRFSTSEEARKWMRTCLDGHSKGLLLSEKKSPPITFYPSLLEGDLVVGLDDDGSRAFSTSTISP--MMTSNRSILGGVVWNASAIF----HELISWTLFPSVGLLYPGR--------------------------NITVRVVSSPDARLDGTITAMFAAEGIGTPEESFHATSS-GLTQGKVKEDVHASATLDYSSGSGVSVRQDMSITFFHCRPGNFWNLSIPSNGHAASCDLCSSIEEGDIKGLDCSAPGASTLKLPIRSGYWRASLNSITIRECFNKGACVGGSTVGSVEEYCGIGYEGPYCAVCSSGYGDGSGNSCHKCTAEFQGVMHFLFALAVLITFIVFLLLGIYLVGGRVAISHTVSATKESARNLHRRGSELLLCSEARGRKDMSVSTFVSSDNWQAGLKARLRGVGVSSDRYSSENGNELVP----RRSGR----------------------VNEKPGLASASTSRRAKALASAISPVPARKVPPPPESPSVDSRGVDSSRVAHPSPFEKRGSGGFEETIAPAQSCSNRGDGYMKDAVHEHNGERKKESGGGKSYAKKYDENKKTTAAVFGGVFGTFPLSKLKIVIVVWQISRAFTEITDVPFPEVYDNFLSFIGIFSLDLGWIMSAACLTVGLDFYDKLLIVTIGPVFLLGLLCITFYVGARP 747
            VF DT  S DLSAVQ D  S+Y AE+T+FVGF GEAVV+ EG LYLDDCDFS S+AS+LV S+   + V RN VLGDNN+  V + A  A++ P    L+NV +TC       S  PCS GS C++G+LGVYCQCY R S+  E      TC+ G    L L+    P    +P+ L+G+L++ L+D               +++      GGV+WN SA+       L+ WT+FPS GLL PGR                          +IT+ VV+ P    +G  T  F A+G+  P      T++ G+ Q     DV          G   +      ++F  C  G +WN S  +   +A C+LC+ +  GD  G++C   GA+T  LP++ GYWRASL+S+ IR+CFN+ AC GGS V S +EYC  GYEGP CAVC+ GYG G  N+CH CTA F+G M+F+ A+A L+T  V  LL +YLVGGR A+S T++ T+ES R L RRGS LL       R + S S   SS    +     L+ VG  SD   S      +     R+S R                      VN+  G  S S S  A  + +  +P+   +                                                                                    AA  G +    PLSKLKIVIVVWQIS AF EIT VPFP VY+ FLS IGIFS DLGW++SAACLT G+DFYDKLLIVTIGPV LL LL  TFY+GARP
Sbjct:  712 VFTDTGGSADLSAVQADEDSSYKAEDTSFVGFAGEAVVFCEGILYLDDCDFSGSTASVLVQSEENFTTV-RNAVLGDNNYFDVAKAASTANEIPTAEPLMNVDVTCDGWMRFSSTPPCSEGSPCIDGDLGVYCQCYTRESSIAEGSP-AETCVTGDPGLLNLTVLSEPADAVFPTKLDGELLLTLNDXXXXXXXXXXXXXGVVVSGVGGTEGGVIWNVSALLLSSEEGLMDWTVFPSTGLLLPGRRLDCSELVHIKSCTEPYPFLPYPLRDSITLHVVTLPSEEFNGETTVSFQADGMPPPASPVAETAAAGVVQTTSLADV----------GERETATASFDVSFVRCESGTYWNNSCDAK-ESACCELCTDVG-GDEDGVNCDENGATTRTLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCAPGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTNRRFNFSASGDGSSGEHPSKSGGALKSVGEESDGGESGGSGRFLGAWGRRKSTRIGAPXXXXXXXXXXXXXXXXXSVNDSKGAGSKSDS--AGTVVAGFAPLARSRAXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARIGEMLARLPLSKLKIVIVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARP 1501          
BLAST of mRNA_H-elongata_contig8.15654.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI)

HSP 1 Score: 430 bits (1105), Expect = 2.530e-129
Identity = 296/760 (38.95%), Postives = 389/760 (51.18%), Query Frame = 0
Query:    1 VFNDTTSSPDLSAVQCDVGSTYVAEETAFVGFEGEAVVYSEGTLYLDDCDFSSSSASMLVYSDPGSSAVIRNTVLGDNNFESVIQDAFEASDFPVNGTLINVALTCSESG--SPCSLGSICLEGELGVYCQCYHRFSTSEEARKWMRTCLDGHSKGL---LLSEKKSPPITFYPSLLEGDLVVGLDDDGSRAFSTSTISPMMTSNRSILGG--VVWNASAIF----HELISWTLFPSVGLLYPGRNITVRVVSSPDARLDGTITAMFAAEGIGTPEESFHATSSGLTQGKVKEDVHASATLDYSSGSGVSVRQDMSITFFHCRPGNFWNLSIPSNG--HAASCDLCSSIEEGDIKGLDCSAPGASTLKLPIRSGYWRASLNSITIRECFNKGACVGGSTVGSVEEYCGIGYEGPYCAVCSSGYGDGSGNSCHKCTAEFQGVMHFLFALAVLITFIVFLLLGIYLVGGRVAISHTVSATKESARNLHRRGSELLLCSEARGRKDMSVSTFVSSDNWQAGLKARLRGVGVSSDRYSSENGNELVPRRSGRVNEKPGLASASTSRRAKALASAISPVPARKVPPPPESPSVDSRGVDSSRVAHPSPFEKRGSGGFEETIAPAQSCSNRGDGYMKDAVHEHNGERKKESGGGKSYAKKYDENKKTTAAVFGGVFGTFPLSKLKIVIVVWQISRAFTEITDVPFPEVYDNFLSFIGIFSLDLGWIMSAACLTVGLDFYDKLLIVTIGPVFLLGLLCITFYVGARP 747
            V NDT+ + DLSAVQ D  STY A++T FVGF GE VVYSEG LYLD+CDFS SS+++LVY++   + VIRN VLG NN+E++ +DA E    P   + IN+ LTC+ S   SPC +GS CLEG+LGVYC+ Y   ST EE       C  G    L   L+ + +S P TFYPSLLE +L +      +       I+   TS+RS +G   V W+ S ++     E   WT+FPS GLL PG ++ +R+VS P+   +G       A  I     +   T+S L          AS T   S G  V+V     + ++ C  GNFWN S+         +C LC+   +G I+G+DC++ GA+T +LPI++GYWRA++ S+TIRECFN+GAC GG+TV  V+EYC  GY GP CAVC +G+G G  + CH CTA F+G M+FL A+             IYLVGG+ A+S TV  TKESA  +  RGS LL  S    R D        SD    G      G  VS++   +E+                           KA               PPE  +  SRG  +SR  +                                                       D++   +      +    PLSKLKIVI          +IT  PFP +Y+ FLS IGIFS DLGWI+SAACLT G+DFYDKLL+VTIGP+  L  L ITF+VG+RP
Sbjct:  498 VVNDTSENSDLSAVQTDALSTYTAQDTCFVGFAGEVVVYSEGELYLDECDFSGSSSAVLVYAELEDATVIRNAVLGANNYETIAEDASEMLQLPSADSFINLNLTCNSSSAVSPCGVGSWCLEGDLGVYCEHYQLRSTLEEV------CASGDVDALTLTLIEDTESQP-TFYPSLLERELQLSFAPSNATNADDDDIA---TSSRSCVGASRVAWSVSGLWPSSEEEQDDWTVFPSTGLLLPGESVRLRLVSQPNDAFNGLANITVRANDI----TALSTTASIL----------ASNTEPQSEGGDVTV----GVEYYFCDEGNFWNSSVSGADLDPTVACTLCTESIDGAIEGVDCASAGATTTELPIKAGYWRANVTSLTIRECFNEGACKGGTTVAEVQEYCNEGYVGPQCAVCETGFGKGMADECHSCTAGFKGGMYFLLAVXXXXXXXXXXXXXIYLVGGKSAVSSTVVNTKESALRIQHRGSVLLTRSVDNARPDFGGL----SDGPPIG------GSAVSTNSPGTEH---------------------------KAA--------------PPEVSAGQSRGQGNSRAGN-------------------------------------------------------DKDDDASPRRVANLLTALPLSKLKIVI----------DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLMVTIGPLLPLCFLGITFFVGSRP 1113          
BLAST of mRNA_H-elongata_contig8.15654.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE)

HSP 1 Score: 426 bits (1095), Expect = 2.560e-127
Identity = 298/758 (39.31%), Postives = 386/758 (50.92%), Query Frame = 0
Query:    1 VFNDTTSSPDLSAVQCDVGSTYVAEETAFVGFEGEAVVYSEGTLYLDDCDFSSSSASMLVYSDPGSSAVIRNTVLGDNNFESVIQDAFEASDFPVNGTLINVALTCSESG-SPCSLGSICLEGELGVYCQCYHRFSTSEEARKWMRTCLDGHSKGLLLS--EKKSPPITFYPSLLEGDLVVGLDDDGSRAFSTSTISPMMTSNRSILGG--VVWNASAIF----HELISWTLFPSVGLLYPGRNITVRVVSSPDARLDGTITAMFAAEGIGTPEESFHATSSGLTQGKVKEDVHASATLDYSSGSGVSVRQDMSITFFHCRPGNFWNLSIPSNG--HAASCDLCSSIEEGDIKGLDCSAPGASTLKLPIRSGYWRASLNSITIRECFNKGACVGGSTVGSVEEYCGIGYEGPYCAVCSSGYGDGSGNSCHKCTAEFQGVMHFLFALAVLITFIVFLLLGIYLVGGRVAISHTVSATKESARNLHRRGSELLLCSEARGRKDMSVSTFVSSDNWQAGLKARLRGVGVSSDRYSSENGNELVPRRSGRVNEKPGLASASTSRRAKALASAISPVPARKVPPPPESPSVDSRGVDSSRVAHPSPFEKRGSGGFEETIAPAQSCSNRGDGYMKDAVHEHNGERKKESGGGKSYAKKYDENKKTTAAVFGGVFGTFPLSKLKIVIVVWQISRAFTEITDVPFPEVYDNFLSFIGIFSLDLGWIMSAACLTVGLDFYDKLLIVTIGPVFLLGLLCITFYVGARP 747
            V +DT+ +PDLSAVQ D  STY+AE+T+FVGF GE VVY EG LYLD+CDFS SS+++LVY++   + VIRN VLG   +E++  DA +    P     IN+ LTC  S  SPC  GS CLEG+LGVYC+ Y   ST EE       C  G    L L+  E      TFYPSL+E +L + L    +       I+   TS+RS  G   V W+ S ++     E   WT+FPS GLL PG ++ +++VS P+   +G       A  I     +   T+S L          AS     S G  V+V    S+  + C  G+FWN S+         +C LC+   +G ++G+DC++ GA+T +LPI++GYWRA + S+TIREC N+ AC GG+TV  V+EYC  GY GP CAVC +G+G G    CH CTA FQG M+FL A               YLVGG+ A+S TV +TKESA  +  RGS LL       RK   VS+F                      R  S+ G +L                                          E PSV+S  V +               G E   AP                    G R + +GG  +     D +          +    PLSKLKIVIVVWQI+ AF +IT  PFP +Y+ FLS IGIFS DLGWI+SAACLT G+DFYDKLLIVTIGP+  L  L ITF+VG+RP
Sbjct:  719 VVSDTSENPDLSAVQTDRLSTYIAEDTSFVGFAGEVVVYGEGELYLDECDFSGSSSAVLVYAELEDATVIRNAVLGVKTYENIADDASDMLQLPSADRFINLNLTCDSSAVSPCGEGSWCLEGDLGVYCERYQLRSTLEEV------CASGDVDALTLTLIEDTESQRTFYPSLIERELQLSLAASNATDAGDDDIA---TSSRSCAGANRVAWSVSGLWPPSEEEQDDWTVFPSTGLLLPGESVRLQLVSQPNDAFNGFANITVRANDI----TALSTTASIL----------ASDAEPQSEGGDVTV----SVEHYLCDEGSFWNSSVSGADLDPTVACKLCTESIDGAVEGVDCTSAGATTKELPIKAGYWRAKVTSLTIRECLNEEACKGGTTVAEVQEYCNEGYVGPQCAVCGTGFGKGVAYECHPCTAGFQGGMYFLLAXXXXXXXXXXXXXXXYLVGGKSAVSSTVVSTKESALRIQHRGSVLLT------RK---VSSF---------------------GRARSDFG-DLT-----------------------------------------EGPSVESSAVSTKAW------------GTEGKAAPTDVSVG--------------GSRGQGTGGTGN-----DRDDDAPPTRVANLLAALPLSKLKIVIVVWQITSAFADITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLCFLGITFFVGSRP 1346          
BLAST of mRNA_H-elongata_contig8.15654.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI)

HSP 1 Score: 418 bits (1075), Expect = 1.920e-125
Identity = 294/760 (38.68%), Postives = 391/760 (51.45%), Query Frame = 0
Query:    1 VFNDTTSSPDLSAVQCDVGSTYVAEETAFVGFEGEAVVYSEGTLYLDDCDFSSSSASMLVYSDPGSSAVIRNTVLGDNNFESVIQDAFEASDFPVNGTLINVALTCSESG--SPCSLGSICLEGELGVYCQCYHRFSTSEEARKWMRTCLDGHSKGL---LLSEKKSPPITFYPSLLEGDLVVGLDDDGSRAFSTSTISPMMTSNRSILGG--VVWNASAIFH----ELISWTLFPSVGLLYPGRNITVRVVSSPDARLDGTITAMFAAEGIGTPEESFHATSSGLTQGKVKEDVHASATLDYSSGSGVSVRQDMSITFFHCRPGNFWNLSIPSNG--HAASCDLCSSIEEGDIKGLDCSAPGASTLKLPIRSGYWRASLNSITIRECFNKGACVGGSTVGSVEEYCGIGYEGPYCAVCSSGYGDGSGNSCHKCTAEFQGVMHFLFALAVLITFIVFLLLGIYLVGGRVAISHTVSATKESARNLHRRGSELLLCSEARGRKDMSVSTFVSSDNWQAGLKARLRGVGVSSDRYSSENGNELVPRRSGRVNEKPGLASASTSRRAKALASAISPVPARKVPPPPESPSVDSRGVDSSRVAHPSPFEKRGSGGFEETIAPAQSCSNRGDGYMKDAVHEHNGERKKESGGGKSYAKKYDENKKTTAAVFGGVFGTFPLSKLKIVIVVWQISRAFTEITDVPFPEVYDNFLSFIGIFSLDLGWIMSAACLTVGLDFYDKLLIVTIGPVFLLGLLCITFYVGARP 747
            V NDT+ +PDLSAVQ D  STY AE+T+FVGF GE VVYSEG LYLD+CDFS SS+++LVY++   + VIRN +LG+ N++++ ++A E    P   + IN+ LTC+ S   SPC  GS CLEG+LGVYC+ Y   ST EE       C  G    L   L+ + +S P TFYPSLLE +L + L    +       I+   TS+RS +G   V W+ S ++     E   WT+FPS GLL PG ++ + +VS P+   +G       A  I     +   T+S L          AS     S G  V++    S+ ++ C  GNFWN S+         +C LC+   +G I+G+DC++ GA+T +LPI++GYWRA++ S+TIRECFN+GAC GG+TV  V++YC  GY GP CAVC +G+G G  + CH CTA F+G M+FL A+             IYLVGG+ A+S TV +TKESA  +  RGS LL                              R VG S  R  S+ G +L                                          E PSV+S  V +         + RG+ G     AP      +  G                            + + T  A    +    PLSKLKIVI          +IT  PFP +Y+ FLS IGIFS DLGWI+SAACLT G+DFYDKLLIVTIGP+  L  L ITF+VG+RP
Sbjct:  534 VVNDTSENPDLSAVQTDRLSTYTAEDTSFVGFAGEVVVYSEGGLYLDECDFSGSSSAVLVYAEKEDATVIRNAMLGEMNYKTIAEEASEMLQLPSADSFINLNLTCNSSSAVSPCGEGSWCLEGDLGVYCEHYQLRSTMEEV------CASGDVDALTLTLIQDTESQP-TFYPSLLERELQLSLAPSNTTNADDDDIA---TSSRSCVGASRVAWSVSGLWPSSEGEQDDWTVFPSTGLLLPGESVRLHLVSQPNDAFNGLANITIRANDI----TALSTTASIL----------ASNAEPQSEGGDVTI----SVEYYFCDEGNFWNSSVSGADLDPTVACTLCTESIDGAIEGVDCASAGATTTELPIKAGYWRANVTSLTIRECFNEGACKGGTTVAEVQDYCNEGYVGPQCAVCDTGFGKGVADECHSCTAGFKGGMYFLLAVXXXXXXXXXXXXXIYLVGGKRAVSSTVVSTKESALRIQHRGSVLL-----------------------------TRSVG-SVGRARSDFG-DLT-----------------------------------------EGPSVESSAVST---------KARGAQG---KAAPTDVSVGQSRGQXXXXXX---------------XXXXXXDARPTRVA---NLLAALPLSKLKIVI----------DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLFFLGITFFVGSRP 1153          
BLAST of mRNA_H-elongata_contig8.15654.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 1.850e-46
Identity = 198/761 (26.02%), Postives = 315/761 (41.39%), Query Frame = 0
Query:   10 DLSAVQCDV-----GSTYVAEETAFVGFEGEAVVYSEGTLYLDDCDFSS-SSASMLVYSDPGSSAVIRNT----------VLGDNNFESVIQDAFEASDFPVNGTLINVALTCSESGSPCSLGSICLEGE-----LGVYCQCYHRFSTSEEARKWMRTCLDGHSKGLLLSEKKSPP--ITFYPSLLEGDLVVGLDDDGSRAFSTSTISPMMTSNRSILGGVVWNASAIFHELISWTLFPSVGLLYPGRNITVRVVSSPDAR-LDGTITAMFAAEGIGTPEESFHATSSGLTQGKVKEDVHASATLDYSSGSGVSVRQDMSITFFHCRPGNFWNLSIPSNGHAASCDLCSSIEEGDIKGLDCSAPGASTLKLPIRSGYWRASLNSITIRECFNKGACVGGSTVGSVEEYCGIGYEGPYCAVCSSGYGDGSGNSCHKCTAEFQGVMHFLFALAVLITFIVFLLLGIYLVGGRVAISHTVSATKESARNLHRRGSELLLCSEARGRKDMSVSTFVSSDNWQAGLKARLRGVGVSSDRYSSENGNELVPRRSGRVNEKPGLASASTSRRAKALASAISPVPARKVPPPPESPSVDSRGVDSSRVAHPSPFEKRGSGGFEETIAPAQSCSNRGDGYMKDAVHEHNGERKKESGGGKSYAKKYDENKKTTAAVFGGVFGTFPLSKLKIVIVVWQISRAFTEITDVPFPEVYDNFLSFIGIFSLDLGWIMSAACLTVGLDFYDKLLIVTIGPVFLLGLLCITFYVGAR 746
            + S +  DV     GS       + +  EG A      TL  +DC F   +  S++  ++P   +++ ++          V+   N ++ I++A        N  ++N +L   +    C   +IC  GE     LGV C+C       +E       CL G   G L    K+PP  +T+ P L+  +L+V    +GS                      +WN +    EL S  + PS G+L PG + TV V  SP  + + G + + F    +G                        S T D ++G  V V       F+ C+   +  + +     A SC+ C +I+  +  GLDC  PGA+   LPIR GYWR+S  S++I +C +  ACVG + + S ++YCG GY+GPYC VC+ G+G G+GN+CH C      ++    +L  L+  ++ +L  +YLVGG       + A +   R+L  R                SV +   S + + G   +  G        ++  G+E+  RR      + G+ S             IS V   ++       S D+ G D     H  P  + G             C  +G+   + A                                        P+ KLKI++VVWQI   F  IT V FP  Y  FLS+I + S DLG ++SA+C+   +DFY  LL+ T+GP+ +  +L +T+++  R
Sbjct:  596 ETSVIASDVSFQSGGSLQEDSSNSAIQLEGGA------TLIAEDCVFGGWTGDSVIQNANPAEGSLVLDSCDFGDTAAAMVVTSPNSDARIRNALVGDLTIENAAVVNNSLALVDRTLGCDNLNICGSGECVDSALGVLCECLE----DDE-------CLGGG--GALSIALKTPPPDVTYSPDLVYFELLVSATANGSTP-------------------AIWNLTFDADEL-SLQVLPSSGILPPGEDATVLVTGSPQGQEVGGDLVSQFVVTSVG------------------------SGTPDSTTGVDVEVYS----AFYLCQAFEY-AMPVDDENAAFSCEQCVNIDGAE--GLDCELPGATLASLPIREGYWRSSRESLSIHQCVHHTACVGATQISSAQDYCGEGYQGPYCTVCTEGFGRGAGNTCHSCEGTKSRLLIAAGSLFALVILLLVILAVVYLVGG-------LDAVEGLRRSLSTR----------------SVLSGRDSSSHKVGSSGKSIG-------RNALTGSEVEERRGEGAASRKGVTSVP-----------ISEVDVSEMK---SDASSDTDGEDD----HAPPMARGGD---------QPGCCGQGEKIKRWAAR-------------------------------------LPMDKLKILVVVWQILSVFPSITAVDFPPAYARFLSWIDMLSFDLGHVLSASCVFPVMDFYQSLLLTTLGPLGVAMVLVLTYWIAKR 1192          
BLAST of mRNA_H-elongata_contig8.15654.1 vs. uniprot
Match: D7FRG6_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG6_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 5.710e-38
Identity = 155/551 (28.13%), Postives = 234/551 (42.47%), Query Frame = 0
Query:  208 VWNASAIFHELISWTLFPSVGLLYPGRNITVRVVSSP-DARLDGTITAMFAAEGIGTPEESFHATSSGLTQGKVKEDVHASATLDYSSGSGVSVRQDMSITFFHCRPGNFWNLSIPSNGH---AASCDLCSSIEEGDIKGLDCSAPGASTLKLPIRSGYWRASLNSITIRECFNKGACVGGSTVGSVEEYCGIGYEGPYCAVCSSGYGDGSGNSCHKCTAEFQGVMHFLFALAVLITFIVFLLLGIYLVGGRVAIS---HTVSATKESARNLHRRGSELLLCSEARGRKDMSVSTFVSSDNWQAGLKARLRGVGVSSDRYSSENGNELVPRRSGRVNEKP-------GLASASTSRRAKALASAISPVPARKVPPPPESPSVDSRGVDSSR---VAHPSPFEKRGSGGFEETIAPAQSCSNRGDGYMKDAVHEHNGERKKESGGGKSYAKKYDENKKTTAAVFGGVFGTFPLSKLKIVIVVWQISRAFTEITDVPFPEVYDNFLSFIGIFSLDLGWIMSAACLTVGLDFYDKLLIVTIGPVFLLGLLCITF 741
            +WN S     L   + FPS G+L PG N+TV V  SP    + G + + FA   +G+                         T + SS +GV +  ++   F+ C+    +  ++P +G    A SC+ C +I+  +  G+DC  PGA+   LP+R GYWR+   S T+  C +  +C G + V + E+YC  GYEGPYCA C +GYG G GN+CH C       +    +L  L+T +V  L  ++LVGG  A+     TVS +   +  L              GR+  SV +  +     A  +  + G+  S      E   E    +  +  ++        GL  +S+                       +SP     G ++ R   V  PS     G+     T+ P+            D      G RK++            E  K  AA         P+ KLKI++VVWQI   F  IT   FP  Y  FLS I   +LD+G I S  C+   + FY +LL+ T+ P+ L G+L +T+
Sbjct:  733 IWNLSYEADGL-ELSPFPSSGVLSPGGNVTVMVTGSPLQQDVGGDLVSRFAVSSVGSG---------------------GGGTAESSSSTGVEL--EVESAFYLCQA---FEYAVPVDGDDDTAVSCEQCVAIDGAE--GVDCELPGATLASLPVREGYWRSGKESSTVLACIHAESCAGATQVSTAEDYCSSGYEGPYCASCQAGYGTGIGNTCHPCDDTRSRWLILAGSLFTLVTLLVLGLAIVFLVGGLDAVEGVRRTVSRSLSVSTKL------------PLGRRSASVGSGAA-----AAAEGAVPGIAASFAPAFEEGKGERNSFQGKQQQQQTAVDFFDDGLLRSSS-----------------------KSPDTAVGGRNTGRFSGVLLPSATTVSGAQ-RHATLGPSSGXXXXXXXVQADLDRAREGWRKEDEKSAACCG--IGEKIKRWAA-------RLPMDKLKILVVVWQILTVFPTITGAEFPPAYAQFLSVIDFINLDIGSIFSGTCILPRVSFYQRLLVTTVTPIGLAGVLLLTY 1204          
BLAST of mRNA_H-elongata_contig8.15654.1 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 8.880e-36
Identity = 137/445 (30.79%), Postives = 194/445 (43.60%), Query Frame = 0
Query:    9 PDLSAVQCDVGSTYVAEETAFVGFEGEAVVYSEGTLYLDDCDFSSS----SASMLVYSDPGSSAVIRNTVLGDNNFESVIQDAFEASDFPVNGTLINVALTCSESGSPCSL--------GSI----CLEGELGVYCQCYHRFSTSEEARKWMRTCLDGHSKGLLLSEKKSPPITFYPSLLEGDLVVGLDDDGSRAFSTSTISPMMTSNRSILGG-VVWNASAIFH----ELISWTLFPSVGLLYPGRNITVRVVSSPDARLDGTITAMFAAEGIGTPEESFHATSSGLTQGKVKEDVHASATLDYSSGSGVSVRQDMSITFFHCRPGNFWNLSIPSNGHAASCDLCSSIEEGDIKGLDCSAPGASTLKLPIRSGYWRASLNSITIRECFNKGACVGGSTVGSVEEYCGIGYEGPYCAVCSSGYGDGSGNSCHKCTAEFQGVMHFL 432
            P + AV+   GS   A   +F G+EG  VV + G L +D CDF  S     +S  V    GS+A I  T  G +   S  Q    +S   V+     +    S  G P  +        GS     C++G LGVYC C+    T EE       CL G +  L   E ++P            L VG+           TIS  +       GG VVW    +      E ++W++ P+VG+L  G + T  +  S  +  +G   A+F AE                                 S  SG +    ++ TF++C  G ++N           C LCS +E  D +GLDC  PG     LP+ SGYWR+S ++ TIR+C  + AC GG+ +   ++YC +GY+GPYCAVC SGY  G  N CH+CT  F+  M+ L
Sbjct: 1094 PSMLAVEMTSGSYMKALACSFSGWEGPYVVLTGGELEMDLCDFRGSIGGVGSSGAV---SGSAAAIVTTSGGSHRVLS--QHRRVSSSGGVHDAKGLLLRDDSGPGRPRRVLSTASEEEGSFSNQDCVDGNLGVYCPCFVATITGEEE------CL-GETTTL---ELEAPSYEL--------LAVGIQ---------GTISSTLNITAGREGGPVVWKVEEVAEVHSTEALTWSIVPNVGILEEGGSATAVITGSLTSDFNGPTHALFKAE---------------------------------SRQSGNTALAMVNTTFYYCLEGEYFNDE--------ECLLCSDLEL-DGEGLDCDEPGVLQSTLPVASGYWRSSADTTTIRQCLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAGMYLL 1464          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8.15654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5M2_ECTSI8.120e-16843.00Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
D7G0A8_ECTSI7.740e-16543.32Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7G0B0_ECTSI9.030e-14740.87Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JRA9_9PHAE8.890e-13438.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G119_ECTSI2.530e-12938.95Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5K4A5_9PHAE2.560e-12739.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXY9_ECTSI1.920e-12538.68Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7FRH4_ECTSI1.850e-4626.02Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FRG6_ECTSI5.710e-3828.13Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JU65_9PHAE8.880e-3630.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11319G PROTEIN-COUPLED RECEPTOR-RELATEDcoord: 347..445
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 428..452
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 694..716
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 650..674
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 746..747
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..427
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 675..693
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 453..649
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 723..745
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 717..722
NoneNo IPR availableTMHMMTMhelixcoord: 652..674
NoneNo IPR availableTMHMMTMhelixcoord: 432..454
NoneNo IPR availableTMHMMTMhelixcoord: 723..745
NoneNo IPR availableTMHMMTMhelixcoord: 694..716

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8contigH-elongata_contig8:19570..28107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8.15654.1mRNA_H-elongata_contig8.15654.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8 19570..28107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8.15654.1 ID=prot_H-elongata_contig8.15654.1|Name=mRNA_H-elongata_contig8.15654.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=747bp
VFNDTTSSPDLSAVQCDVGSTYVAEETAFVGFEGEAVVYSEGTLYLDDCD
FSSSSASMLVYSDPGSSAVIRNTVLGDNNFESVIQDAFEASDFPVNGTLI
NVALTCSESGSPCSLGSICLEGELGVYCQCYHRFSTSEEARKWMRTCLDG
HSKGLLLSEKKSPPITFYPSLLEGDLVVGLDDDGSRAFSTSTISPMMTSN
RSILGGVVWNASAIFHELISWTLFPSVGLLYPGRNITVRVVSSPDARLDG
TITAMFAAEGIGTPEESFHATSSGLTQGKVKEDVHASATLDYSSGSGVSV
RQDMSITFFHCRPGNFWNLSIPSNGHAASCDLCSSIEEGDIKGLDCSAPG
ASTLKLPIRSGYWRASLNSITIRECFNKGACVGGSTVGSVEEYCGIGYEG
PYCAVCSSGYGDGSGNSCHKCTAEFQGVMHFLFALAVLITFIVFLLLGIY
LVGGRVAISHTVSATKESARNLHRRGSELLLCSEARGRKDMSVSTFVSSD
NWQAGLKARLRGVGVSSDRYSSENGNELVPRRSGRVNEKPGLASASTSRR
AKALASAISPVPARKVPPPPESPSVDSRGVDSSRVAHPSPFEKRGSGGFE
ETIAPAQSCSNRGDGYMKDAVHEHNGERKKESGGGKSYAKKYDENKKTTA
AVFGGVFGTFPLSKLKIVIVVWQISRAFTEITDVPFPEVYDNFLSFIGIF
SLDLGWIMSAACLTVGLDFYDKLLIVTIGPVFLLGLLCITFYVGARP
back to top