prot_H-elongata_contig79990.15652.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79990.15652.1
Unique Nameprot_H-elongata_contig79990.15652.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length229
Homology
BLAST of mRNA_H-elongata_contig79990.15652.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 1.670e-41
Identity = 95/233 (40.77%), Postives = 138/233 (59.23%), Query Frame = 0
Query:    3 VRSTARAAAHSKELVVATWNVRTMSEKGTSRPGH-AEDLLMFAAKYECDFIVIQETRRGGRTTIQAPAAGYVVHCSGHCDGDRSKSGILGVGLAVRESIARALGPDGIVPEHISARLLKVRVIFKHRAATTFIVGYAPTETEATCH------KSKFWKELRSIVAEVPASNHLIFMMDANARTGGRGGGGGLGGVRVLGPYGRDTLNDNGSRLLACAAEHKLSIVTTFFSTPK 228
            V++TA+  A   +L   T+NVRT++  G +  GH    ++   A  +CD I +QETRR G+  I     GYV+  SG   G + K G+ GVG+A++E++  ++G  G   E IS RL+KVR+        TF+VGYAPTET           K  FW  L + + EV + +HL+ +MDANARTG R  G      +++G YGRD +N+NG RLL  AA+++LS++ T+F TPK
Sbjct:   77 VKATAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPK 305          
BLAST of mRNA_H-elongata_contig79990.15652.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 2.770e-41
Identity = 93/233 (39.91%), Postives = 138/233 (59.23%), Query Frame = 0
Query:    3 VRSTARAAAHSKELVVATWNVRTMSEKGTSRPGH-AEDLLMFAAKYECDFIVIQETRRGGRTTIQAPAAGYVVHCSGHCDGDRSKSGILGVGLAVRESIARALGPDGIVPEHISARLLKVRVIFKHRAATTFIVGYAPTETEATCH------KSKFWKELRSIVAEVPASNHLIFMMDANARTGGRGGGGGLGGVRVLGPYGRDTLNDNGSRLLACAAEHKLSIVTTFFSTPK 228
            V++ A+  A   +L   T+NVRT++  G +  GH    ++   +   CD I +QETRR G+ +I     GYV+  SG   G + K G+ GVG+A++E++  ++G +G   E IS RL+KVR+        TF+VGYAPTET  T        K  FW  L + + EV + +HL+ +MDANARTG R  G      +++G YGRD +N+NG RLL  A++++LS+  T+F TPK
Sbjct:  162 VKAAAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK 390          
BLAST of mRNA_H-elongata_contig79990.15652.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 3.030e-40
Identity = 92/233 (39.48%), Postives = 137/233 (58.80%), Query Frame = 0
Query:    3 VRSTARAAAHSKELVVATWNVRTMSEKGTSRPGH-AEDLLMFAAKYECDFIVIQETRRGGRTTIQAPAAGYVVHCSGHCDGDRSKSGILGVGLAVRESIARALGPDGIVPEHISARLLKVRVIFKHRAATTFIVGYAPTETEATCH------KSKFWKELRSIVAEVPASNHLIFMMDANARTGGRGGGGGLGGVRVLGPYGRDTLNDNGSRLLACAAEHKLSIVTTFFSTPK 228
            V++ A+  A   +L   T+NVRT++  G +  GH    ++   +   CD I +QETRR G+ +I     GYV+  SG   G + K G+ GVG+A++E++  ++G +G   E IS RL+KVR+        TF+VGYAPTET  T        K  FW  L + + EV + +HL+ +MDANARTG R  G      +++G YGRD +N+NG RLL  A++++LS+  T+  TPK
Sbjct:   73 VKAAAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYVQTPK 301          
BLAST of mRNA_H-elongata_contig79990.15652.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 6.610e-40
Identity = 90/232 (38.79%), Postives = 135/232 (58.19%), Query Frame = 0
Query:    3 VRSTARAAAHSKELVVATWNVRTMSEKGTSRPGH-AEDLLMFAAKYECDFIVIQETRRGGRTTIQAPAAGYVVHCSGHCDGDRSKSGILGVGLAVRESIARALGPDGIVPEHISARLLKVRVIFKHRAATTFIVGYAPTETEATCH------KSKFWKELRSIVAEVPASNHLIFMMDANARTGGRGGGGGLGGVRVLGPYGRDTLNDNGSRLLACAAEHKLSIVTTFFSTP 227
            V++ A+  A   +L   T+NVRT++  G +  GH    ++   +   CD I +QETRR G+ +I     GYV+  SG   G + K G+ GVG+A++E++  ++G +G   E I  RL+KVR+        TF+V YAPTET  T        K  FW  L +++ EV + +HL+ +MDANARTG R  G      +++G YGRD +N+NG RLL  A+ ++LS+  T+F TP
Sbjct:  135 VKAAAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRIGRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTGRRRDG--CCDAKIMGVYGRDIMNNNGERLLGLASNNQLSLTNTYFRTP 362          
BLAST of mRNA_H-elongata_contig79990.15652.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 9.510e-40
Identity = 90/233 (38.63%), Postives = 135/233 (57.94%), Query Frame = 0
Query:    3 VRSTARAAAHSKELVVATWNVRTMSEKGTSRPGH-AEDLLMFAAKYECDFIVIQETRRGGRTTIQAPAAGYVVHCSGHCDGDRSKSGILGVGLAVRESIARALGPDGIVPEHISARLLKVRVIFKHRAATTFIVGYAPTETEATCH------KSKFWKELRSIVAEVPASNHLIFMMDANARTGGRGGGGGLGGVRVLGPYGRDTLNDNGSRLLACAAEHKLSIVTTFFSTPK 228
            V++ A+  A   +L   T+NVRT++  G +  GH    ++   +   CD I +QETRR G+ +I     GYV+  SG   G + K G+ GVG+ ++E++  ++G +G   E I  RL+KVR+         F+VGYAPTET  T        K  FW  L + + EV + +HL+ +MDANARTG R  G      +++G YGRD +N+NG RLL  A++++LS+  T+F TPK
Sbjct:   68 VKAAAKRKAREGDLSFGTFNVRTLACSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK 296          
BLAST of mRNA_H-elongata_contig79990.15652.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.570e-38
Identity = 81/195 (41.54%), Postives = 116/195 (59.49%), Query Frame = 0
Query:   40 LLMFAAKYECDFIVIQETRRGGRTTIQAPAAGYVVHCSGHCDGDRSKSGILGVGLAVRESIARALGPDGIVPEHISARLLKVRVIFKHRAATTFIVGYAPTETEATCH------KSKFWKELRSIVAEVPASNHLIFMMDANARTGGRGGGGGLGGVRVLGPYGRDTLNDNGSRLLACAAEHKLSIVTTFFSTPK 228
            ++   A  +CD I +QETRR G+  I     GYV+  SG   G + K G+ GVG+A++E++  ++G  G   E IS RL+KVR+        TF+VGYAPTET           K  FW  L + + EV + +HL+ +MDANARTG R  G      +++G YGRD +N+NG RLL  AA+++LS++ T+  TPK
Sbjct:    3 VMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYIRTPK 193          
BLAST of mRNA_H-elongata_contig79990.15652.1 vs. uniprot
Match: A0A6H5K5A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A7_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 2.760e-38
Identity = 91/233 (39.06%), Postives = 136/233 (58.37%), Query Frame = 0
Query:    3 VRSTARAAAHSKELVVATWNVRTMSEKGTSRPGH-AEDLLMFAAKYECDFIVIQETRRGGRTTIQAPAAGYVVHCSGHCDGDRSKSGILGVGLAVRESIARALGPDGIVPEHISARLLKVRVIFKHRAATTFIVGYAPTETEATCH------KSKFWKELRSIVAEVPASNHLIFMMDANARTGGRGGGGGLGGVRVLGPYGRDTLNDNGSRLLACAAEHKLSIVTTFFSTPK 228
            V++ A+  A   +L   T+NVRT++  G +  GH    ++   +   CD I +QETRR G+ +I     GYV+  SG   G + K G+ GVG+A++E++  ++G +G   E IS RL+KVR+   H      +VGYAPTET  T        K  FW  L + + EV + +HL+ +MDANARTG R  G      +++G YGRD +N+NG R L  A++++LS+  T+F TPK
Sbjct:  120 VKAAAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQIWSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGHTCGVISVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERRLGLASDNQLSLTNTYFRTPK 348          
BLAST of mRNA_H-elongata_contig79990.15652.1 vs. uniprot
Match: A0A6H5J6W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6W7_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.800e-38
Identity = 89/233 (38.20%), Postives = 136/233 (58.37%), Query Frame = 0
Query:    3 VRSTARAAAHSKELVVATWNVRTMSEKGTSRPGH-AEDLLMFAAKYECDFIVIQETRRGGRTTIQAPAAGYVVHCSGHCDGDRSKSGILGVGLAVRESIARALGPDGIVPEHISARLLKVRVIFKHRAATTFIVGYAPTETEATCH------KSKFWKELRSIVAEVPASNHLIFMMDANARTGGRGGGGGLGGVRVLGPYGRDTLNDNGSRLLACAAEHKLSIVTTFFSTPK 228
            V++ A+  A   +L   T+NVRT++  G +  GH    ++   +   CD + + ETRR G+ +I     GYV+  SG   G + K G+ G+G+A++E +  ++G +G   E IS RL+KVR+        TF+VGYAPTET  T        K  FW  L + + EV + +HL+ +MDANARTG R  G      +++G YGRD +N++G RLL  A++++LS+  T+F TPK
Sbjct:   24 VKAAAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVVGLHETRREGQGSIAHD--GYVIIWSGARAGTKEKRGVHGMGIAIKEVMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCNAKIMGAYGRDIMNNSGERLLGLASDNQLSLTNTYFRTPK 252          
BLAST of mRNA_H-elongata_contig79990.15652.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 8.150e-38
Identity = 82/186 (44.09%), Postives = 114/186 (61.29%), Query Frame = 0
Query:   49 CDFIVIQETRRGGRTTIQAPAAGYVVHCSGHCDGDRSKSGILGVGLAVRESIARALGPDGIVPEHISARLLKVRVIFKHRAATTFIVGYAPTETEATCH------KSKFWKELRSIVAEVPASNHLIFMMDANARTGGRGGGGGLGGVRVLGPYGRDTLNDNGSRLLACAAEHKLSIVTTFFSTPK 228
            CD I +QETRR G+ +I     GYV+  SG   G + K G+ GVG+A++E++  ++G +G   E IS RL+KVR+        TF+VGYAPTET  T        K  FW  L + + EV + +HL+ +MDANARTG R GG      +VLG YGRD +N+NG RL   A++++ S+  T+F TPK
Sbjct:   12 CDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRGG--CCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPK 193          
BLAST of mRNA_H-elongata_contig79990.15652.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 1.590e-37
Identity = 91/233 (39.06%), Postives = 135/233 (57.94%), Query Frame = 0
Query:    3 VRSTARAAAHSKELVVATWNVRTMSEKGTSRPGH-AEDLLMFAAKYECDFIVIQETRRGGRTTIQAPAAGYVVHCSGHCDGDRSKSGILGVGLAVRESIARALGPDGIVPEHISARLLKVRVIFKHRAATTFIVGYAPTETEATCH------KSKFWKELRSIVAEVPASNHLIFMMDANARTGGRGGGGGLGGVRVLGPYGRDTLNDNGSRLLACAAEHKLSIVTTFFSTPK 228
            V++ A+  A   +L   T++VRT+   G +  GH    ++  ++   CD I +QETRR G+ +I     GYV+  SG   G + K G  GVG+A++E++   +G +G   E IS RL+KVR+        TF+VGYAPTET           K  FW  L + + EV + +HL+ +MDANARTG R  G      +++G YGRD +N+NG RLL  A++++LS+  T+F TPK
Sbjct:  142 VKAAAKKKAREGDLSFGTFSVRTLVYSGRNPIGHNVMKVMQISSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK 370          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79990.15652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQH5_9PHAE1.670e-4140.77Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K3Q1_9PHAE2.770e-4139.91Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JMB4_9PHAE3.030e-4039.48Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L660_9PHAE6.610e-4038.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KV75_9PHAE9.510e-4038.63Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KP87_9PHAE1.570e-3841.54Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K5A7_9PHAE2.760e-3839.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J6W7_9PHAE2.800e-3838.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBZ6_9PHAE8.150e-3844.09Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JVN7_9PHAE1.590e-3739.06Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 17..229
e-value: 1.0E-16
score: 63.1
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 10..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79990contigH-elongata_contig79990:2208..2894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79990.15652.1mRNA_H-elongata_contig79990.15652.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79990 2208..2894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79990.15652.1 ID=prot_H-elongata_contig79990.15652.1|Name=mRNA_H-elongata_contig79990.15652.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp
RLVRSTARAAAHSKELVVATWNVRTMSEKGTSRPGHAEDLLMFAAKYECD
FIVIQETRRGGRTTIQAPAAGYVVHCSGHCDGDRSKSGILGVGLAVRESI
ARALGPDGIVPEHISARLLKVRVIFKHRAATTFIVGYAPTETEATCHKSK
FWKELRSIVAEVPASNHLIFMMDANARTGGRGGGGGLGGVRVLGPYGRDT
LNDNGSRLLACAAEHKLSIVTTFFSTPKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf