prot_H-elongata_contig7998.15649.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7998.15649.1
Unique Nameprot_H-elongata_contig7998.15649.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
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BLAST of mRNA_H-elongata_contig7998.15649.1 vs. uniprot
Match: A0A6H5JJG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG9_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 2.180e-22
Identity = 41/70 (58.57%), Postives = 55/70 (78.57%), Query Frame = 0 
Query:    1 MATHVCTRDYFNKVWKGYFPKLKLKRNGDFMLCEICTLLKEKNHGQAGSRGIQNQAERAKDMQFYGDHVE 70
            +A  +C+++YFN+VW  +F  LKLK NGDFMLCEICTLLKEK HGQAGSRG+ ++AER +    Y +H++
Sbjct:  304 LAERLCSKNYFNQVWSAHFGNLKLKPNGDFMLCEICTLLKEKIHGQAGSRGVLDEAERERHQSVYKEHLQ 373
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7998.15649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJG9_9PHAE2.180e-2258.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7998contigH-elongata_contig7998:1897..2237 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7998.15649.1mRNA_H-elongata_contig7998.15649.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7998 1737..2279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7998.15649.1 ID=prot_H-elongata_contig7998.15649.1|Name=mRNA_H-elongata_contig7998.15649.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
MATHVCTRDYFNKVWKGYFPKLKLKRNGDFMLCEICTLLKEKNHGQAGSR
GIQNQAERAKDMQFYGDHVET*
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