prot_H-elongata_contig79813.15633.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79813.15633.1
Unique Nameprot_H-elongata_contig79813.15633.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length119
Homology
[Close]
BLAST of mRNA_H-elongata_contig79813.15633.1 vs. uniprot
Match: D7FZF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF6_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 1.550e-36
Identity = 78/115 (67.83%), Postives = 91/115 (79.13%), Query Frame = 0 
Query:    1 KRSLEEELHVLLPVLLAHAPRIKMREATGALLRTRFAPSLLHVSVKNDPLSLESIVLGVCDAVTPVGNSVPPLRPPRTPNRIKAKPNRVTERAEELVMRLCSLGAMASIKIRSVL 115
            +RSLEEELH+LLPVLLAHAPR++MRE++ ALLRTRFAPSLLHVS  NDPLSLESIVLGVCDAV     + P +   RT +R       V+ RAEELVMRLC LGA+AS+K+R VL
Sbjct:  333 QRSLEEELHMLLPVLLAHAPRVRMRESSAALLRTRFAPSLLHVSAMNDPLSLESIVLGVCDAVA----ATPGITATRTSHR-------VSRRAEELVMRLCGLGAIASVKVRQVL 436
[Close]
BLAST of mRNA_H-elongata_contig79813.15633.1 vs. uniprot
Match: A0A6H5K9Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q4_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.160e-5
Identity = 33/64 (51.56%), Postives = 38/64 (59.38%), Query Frame = 0 
Query:   53 ESIVLGVCDAVTPVGNSVPPLRPPRTPNRIKAKPNRVTERAEELVMRLCSLGAMASIKIRSVLV 116
            + IVLGVCDAVT        L             + V+ RAEELVMRLC LGAMAS+K+R VLV
Sbjct:  105 QRIVLGVCDAVTVTPGITATLTS-----------HNVSRRAEELVMRLCGLGAMASVKVRGVLV 157
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79813.15633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZF6_ECTSI1.550e-3667.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9Q4_9PHAE1.160e-551.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79813contigH-elongata_contig79813:51..931 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79813.15633.1mRNA_H-elongata_contig79813.15633.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79813 51..931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79813.15633.1 ID=prot_H-elongata_contig79813.15633.1|Name=mRNA_H-elongata_contig79813.15633.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
KRSLEEELHVLLPVLLAHAPRIKMREATGALLRTRFAPSLLHVSVKNDPL
SLESIVLGVCDAVTPVGNSVPPLRPPRTPNRIKAKPNRVTERAEELVMRL
CSLGAMASIKIRSVLVSV*
back to top