prot_H-elongata_contig79770.15631.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79770.15631.1
Unique Nameprot_H-elongata_contig79770.15631.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length285
Homology
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 9.370e-76
Identity = 136/285 (47.72%), Postives = 189/285 (66.32%), Query Frame = 0
Query:    3 IHFKEFVRQVSKV-KDPKLPTRRQLVDDFEETRDDLYQGARKMLERQHTAMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITA-HIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAIQLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYVHDVSRGL 285
            + + EF   VS + K  + P RR LV+   E + +L      ML+ ++ A+T+DGWTS SN++Y S T ++ID  + LH L+++C K +  T G DLA  +  +I+ HG+ GRVTA VTDC+PSM+  GR LE       HIGC NHR+E TT+ VFN   +   +A   A+V RY +SS+M+ RL     ILK+  L V+Q+VETRW S+++ +ER   L  AI+LHE  DNIAP+L++ DWEVL+LIEPILRPFM+ Q +LEGAKYVTGS+ VP + ++  GL
Sbjct:   29 VEYPEFHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLGA-LAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGL 312          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 3.170e-74
Identity = 131/268 (48.88%), Postives = 180/268 (67.16%), Query Frame = 0
Query:   19 KLPTRRQLVDDFEETRDDLYQGARKMLERQHTAMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNIT-AHIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAIQLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYVHDVSRGL 285
            K+P+RR+L+      +  L      ML+ +  A+T+DGWTS +N++Y S T ++ID E+ LH L++DC K +  T G DLA  V G+++ H + GRV A VTDC+PSMI  GR LE    T +HIGC NHR+E TT+ VFN   +   + L   LV RY KSS+M  RL ++C IL++  L VMQ+VETRW ST++ V R   L  AI+LHE +D + PLL+D DWEVL+LIEPILRPFM+ Q +LEGA+YVTGS+ +  + ++  GL
Sbjct:   10 KVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLGA-LGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGL 276          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.510e-66
Identity = 119/278 (42.81%), Postives = 172/278 (61.87%), Query Frame = 0
Query:    4 HFKEFVRQVSKVKDPKLPTRRQLVDDFEETRDDLYQGARKMLERQHTAMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAIQLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYVHDV 281
            HF E VR +       +P +R  ++     +  L Q     L  +H A+TSDGWTS SNDTY  +T ++I   F+L  L ++C+K   +T G DL + VK +I  +G+  R  A  TDC+PSM+  GR LEE     H+GC  HR+E  T+  F  PGV + +AL   +VTRY  SS+ +DRLE++  I++V   +V+Q+VETRW ST++S+ R   LR  I  HER+D+I PLL + DWEVL+++EP+ +PF+  Q   E +K VT SLV+PY+ D+
Sbjct:    6 HFIEMVRFLKSR--ATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADL 281          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 5.130e-65
Identity = 114/238 (47.90%), Postives = 156/238 (65.55%), Query Frame = 0
Query:   48 QHTAMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAIQLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYVHDVSRGL 285
            +H A+TSDGWT  SNDTY S+T ++I   F+L  L ++C+K   +TAG DL + VK +I  +G+ GR  A  TDC+ SM+  GR LEE     H+GC  HR+E  T+  F  PGV + +AL   +VTRYT SS+ +DRLE++C I++V    V+Q+VETRW ST+ S+ R   LR  I  HE +D+  PLL + DWEVL+L+E +L+PFM  Q  LE +K VT  LV PY+ D+  GL
Sbjct:    4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGL 241          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.350e-52
Identity = 96/223 (43.05%), Postives = 136/223 (60.99%), Query Frame = 0
Query:   59 SCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAIQLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYVHDV 281
            S SNDTY ++T ++I   F+L  L ++ +K   +T G DL + VK +I  +G+ GR  A  TDC+P M+  GR LEE    +H+GC  HR E  T+  F  PGV + +AL   +VTRYT SS+ ++RLE++C I++V   +V+Q+VETRW ST                   +D+I PLL + DWEVL+L+EP+L PFM  Q  LE +K VT SLV  Y+ D+
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADL 209          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 2.450e-35
Identity = 75/190 (39.47%), Postives = 115/190 (60.53%), Query Frame = 0
Query:   19 KLPTRRQLVDDFEETRDDLYQGARKMLERQHTAMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLE-ERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEE-ICWILKVPSLQVMQNVET 206
            ++P ++  V      +  + +   +++E +   +TSDGWTSC+NDTY S T + I   + L  L++DC K    T G  LA  +K  +  HG+ G+VTA  TDC+PSM+  GR L  +  ++  IGCCN+R+E T+++VFN P VK+ M L   LVTRY  SS+  DRL++ +   L V + +V+Q+V T
Sbjct:   10 RVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT 199          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: UPI000CE20A6F (zinc finger BED domain-containing protein 4-like n=1 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE20A6F)

HSP 1 Score: 108 bits (269), Expect = 1.250e-23
Identity = 77/243 (31.69%), Postives = 117/243 (48.15%), Query Frame = 0
Query:   51 AMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPAL----------VTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAI-----QLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYV 278
            ++T+D WTS + D Y + T+ FI +E  L  + +   K  +      LA+    L++  G+ G+VT  VTDC P+M+ C   L    +  HI C  H +            VK+++A  P L          V  +  S+   ++L E+   L  P  ++MQ VETRWNSTF+ +ER  + R+ +      LH  L    P LT  D++ +     +L PF E  VEL   K V+ S V+P V
Sbjct:  101 SLTADMWTSINMDAYLAVTSHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANIL----LLRHIMCFAHMLNLV---------VKKSLAQTPELEDVRSKGRRIVGLFKSSTTAKEKLSEMERQLARPEHKLMQEVETRWNSTFNMLERLFKEREPLGAALATLHTDL----PPLTSEDYQAIHHCLSVLSPFQEATVELSTEKRVSASKVIPMV 326          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: UPI0007425A22 (zinc finger BED domain-containing protein 1-like n=1 Tax=Cyprinodon variegatus TaxID=28743 RepID=UPI0007425A22)

HSP 1 Score: 107 bits (266), Expect = 2.920e-23
Identity = 82/288 (28.47%), Postives = 147/288 (51.04%), Query Frame = 0
Query:    3 IHFKEFVRQVSKVKDPK--LPTRRQLVDDFEETRDDLYQGAR-KMLERQHTAMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPALVTRYTKSSK-MTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAIQLH-ERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYVHDVSRGL 285
            + FK FV ++    DP   LPTR+ L    EE  +   Q A+ K+ E    ++T+D WT  + D Y +    F+DD+  L+ + +  Q   +     ++A   K +++  G++ +VT  VTD  P+M+ C R+L+ R+   HI C  H +        ++  V   +  +   +  Y +SS  + ++L ++   L +  L++MQ VETRWNST+  ++R  +LR+ +      L    P+LT  ++E+++    +L PF    VEL   + V+ S V+P +  + + L
Sbjct:   49 VGFKAFVAKL----DPNYVLPTRQALKAMVEEKFESAKQKAKAKVGEVAAVSLTTDMWTFMNMDAYLAVMCHFLDDKARLNTVLLGVQSFPQSHTAENIACVKKSMMEEWGISNKVTCVVTDGAPNMVACVRELKLRH---HI-CVAHTMNLVVKKSLDQHPVLSGIQAKAWKLVGYCRSSTTVKEKLSQVQRHLGLQELKLMQEVETRWNSTYLMLQRLMELREPVGAALAGLQTDIPILTSEEFEIVRGCLSLLIPFYHATVELSAEETVSASKVIPLLKVLEQSL 328          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: UPI000CE1F3DA (zinc finger BED domain-containing protein 4-like n=10 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE1F3DA)

HSP 1 Score: 108 bits (271), Expect = 4.200e-23
Identity = 78/243 (32.10%), Postives = 117/243 (48.15%), Query Frame = 0
Query:   51 AMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPAL----------VTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAI-----QLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYV 278
            ++T+D WTS + DTY + T  FI +E  L  + +   K  +      LA+    L++  G+ G+VT  VTDC P+M+ C   L    +  HI C  H +            VK+++A  P L          V  +  S+   ++L E+   L  P  +++Q VETRWNSTF+ +ER  + R+ +      LH  L    P LT  D++ +     IL PF E  VEL   K V+ S V+P V
Sbjct:  140 SLTADMWTSINMDTYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANIL----LLRHIMCFAHMLNLV---------VKKSLAQTPELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDL----PPLTSEDYQAIHHCLSILSPFQEATVELSTEKRVSASKVIPMV 365          
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Match: UPI000CE1E21C (zinc finger BED domain-containing protein 4-like n=8 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE1E21C)

HSP 1 Score: 107 bits (266), Expect = 1.080e-22
Identity = 77/243 (31.69%), Postives = 116/243 (47.74%), Query Frame = 0
Query:   51 AMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLADNVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIECTTALVFNEPGVKRTMALQPAL----------VTRYTKSSKMTDRLEEICWILKVPSLQVMQNVETRWNSTFSSVERTRQLRDAI-----QLHERLDNIAPLLTDYDWEVLKLIEPILRPFMEIQVELEGAKYVTGSLVVPYV 278
            ++T+D WTS + D Y + T  FI +E  L  + +   K  +      LA+    L++  G+ G+VT  VTDC P+M+ C   L    +  HI C  H +            VK+++A  P L          V  +  S+   ++L E+   L  P  +++Q VETRWNSTF+ +ER  + R+ +      LH  L    P LT  D++ +     IL PF E  VEL   K V+ S V+P V
Sbjct:   24 SLTADMWTSINMDAYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANIL----LLRHIMCFAHMLNLV---------VKKSLAQTPELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDL----PPLTSEDYQAIHHCLSILSPFQEATVELSTEKRVSASKVIPMV 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79770.15631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUY5_9PHAE9.370e-7647.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS5_ECTSI3.170e-7448.88Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JJV8_9PHAE1.510e-6642.81Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE5.130e-6547.90Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KVI1_9PHAE1.350e-5243.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Y8_9PHAE2.450e-3539.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000CE20A6F1.250e-2331.69zinc finger BED domain-containing protein 4-like n... [more]
UPI0007425A222.920e-2328.47zinc finger BED domain-containing protein 1-like n... [more]
UPI000CE1F3DA4.200e-2332.10zinc finger BED domain-containing protein 4-like n... [more]
UPI000CE1E21C1.080e-2231.69zinc finger BED domain-containing protein 4-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 4..282
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 42..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79770contigH-elongata_contig79770:1476..2330 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79770.15631.1mRNA_H-elongata_contig79770.15631.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79770 1476..2330 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79770.15631.1 ID=prot_H-elongata_contig79770.15631.1|Name=mRNA_H-elongata_contig79770.15631.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=285bp
MRIHFKEFVRQVSKVKDPKLPTRRQLVDDFEETRDDLYQGARKMLERQHT
AMTSDGWTSCSNDTYHSYTASFIDDEFNLHELAMDCQKMSEKTAGTDLAD
NVKGLIDSHGMAGRVTADVTDCDPSMIVCGRKLEERNITAHIGCCNHRIE
CTTALVFNEPGVKRTMALQPALVTRYTKSSKMTDRLEEICWILKVPSLQV
MQNVETRWNSTFSSVERTRQLRDAIQLHERLDNIAPLLTDYDWEVLKLIE
PILRPFMEIQVELEGAKYVTGSLVVPYVHDVSRGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf