prot_H-elongata_contig7968.15622.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7968.15622.1
Unique Nameprot_H-elongata_contig7968.15622.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length360
Homology
BLAST of mRNA_H-elongata_contig7968.15622.1 vs. uniprot
Match: D8LN57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN57_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 7.130e-85
Identity = 240/358 (67.04%), Postives = 277/358 (77.37%), Query Frame = 0
Query:    6 AILQKFEVVCDGDVCERMPVGSPRAAQT------ADAASENFSKEHAAVVNASARAKYRATTPSGDDNEKKERRDPTGDGYEERVKDSGISQLVAMGWDTDDSVTALADAGGDVLAAAEALAAREEEDLERYEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKALLMQWQKDIESRADGRKAQKQFEKTVKGVKEQGPKGNIGGGSKSGVKENEPAPTPTPAKRDNVVFQVTDKNFQKVVIESPVPVILDVYAEWCGPCKQLTPALEEAAMKSGGMFRVAKVDAEQQRNIAEVLGIKAYPSIFGVKNGIIVDNFVGILPQDEVR 357
            A+ Q++EVVCDGDVCER PVG P  AQT      A A +                A       +G D++        G G      D G++QLV+MGW+ ++S  AL  +GGDV+AAAEALAA+EEEDLERYE+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKALLMQWQKDIE +   RK QKQFEKTV+GV ++G K     G  S  K++EP P PTPAKR++VVF+VTDK  QKVV+ESPVPVILDVYAEWCGPCKQLTPALEEAAM+SGGMFRVAKVDAE+QR+IAEVLGI A+PS+FG+K+GII+DNFVG L QDE++
Sbjct:  277 ALPQEYEVVCDGDVCERRPVG-PNPAQTVPAVDGAAAEAXXXXXXXXXXXXXXXXADNALVPDAGGDSD-------GGGGVPPSAVDPGVAQLVSMGWEAEESTAALEASGGDVVAAAEALAAQEEEDLERYEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKALLMQWQKDIEGKGGSRKDQKQFEKTVQGVHQKGVKE----GKASTTKKSEP-PAPTPAKREDVVFEVTDKTLQKVVLESPVPVILDVYAEWCGPCKQLTPALEEAAMRSGGMFRVAKVDAEKQRSIAEVLGIHAFPSVFGMKDGIILDNFVGGLAQDEMQ 621          
BLAST of mRNA_H-elongata_contig7968.15622.1 vs. uniprot
Match: A0A6H5KL39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL39_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 7.770e-80
Identity = 221/375 (58.93%), Postives = 254/375 (67.73%), Query Frame = 0
Query:    6 AILQKFEVVCDGDVCERMPVGSPRAAQTADAASENFSKEHAAVVNASARA--------------------KYRATTPSGDDNEKKERRDPTGDGYEERVKDSGISQLVAMGWDTDDSVTALADAGGDVLAAAEALAAREEEDLERYEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RKALLMQWQKDIESRADGRKAQKQFEKTVKGVKEQGPKGNIGGGSKSGVKENEPAPTPTPAKRDNVVFQVTDKNFQKVVIESPVPVILDVYAEWCGPCKQLTPALEEAAMKSGGMFRVAKVDAEQQRNIAEVLGIKAYPSIFGVKNGIIVDNFVGILPQDEVR 357
            A  Q++EVVCDGDVCER PVGS   AQT  A           V  A+A A                          P              G        D G++QLV+MGW+T++S  AL  +GGDV+AAAEALAA+EEEDLERYE+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    XXXXXXXX   RKALLMQWQKDIE +   RK QKQFEKTV+GV ++G K     G  S  K+NEP P PTPAKR++VVF+VTDK  QKVV+ESPVPVILDVYAEWCGPCKQLTPALEEAA++SGGMFRVAKVDAE+QR+IAEVLGI A+PS+FG+K+GII+DNFVG L QDE++
Sbjct:  276 AFPQEYEVVCDGDVCERKPVGS-NPAQTVPA-----------VGGAAAEAGXXXXXXXXXXXXXXXXXXXXXXXAVPDAGGXXXXXXXXXXGGEVPPSAVDPGVAQLVSMGWETEESTAALEASGGDVVAAAEALAAQEEEDLERYEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDRRAGVLSMQFEKSIEEXXXXXXXXXXARKALLMQWQKDIEGKGGSRKDQKQFEKTVQGVHQKGVKE----GKASTSKKNEP-PAPTPAKREDVVFEVTDKTLQKVVLESPVPVILDVYAEWCGPCKQLTPALEEAAIRSGGMFRVAKVDAEKQRSIAEVLGIHAFPSVFGMKDGIILDNFVGGLAQDEMQ 633          
BLAST of mRNA_H-elongata_contig7968.15622.1 vs. uniprot
Match: A0A836CN35_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN35_9STRA)

HSP 1 Score: 173 bits (438), Expect = 3.230e-44
Identity = 153/268 (57.09%), Postives = 198/268 (73.88%), Query Frame = 0
Query:   91 QLVAMGWDTDDSVTALADAGGDVLAAAEALAAREEEDLERYEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKALLMQWQKDIESRADGRKAQKQFEKTVKGVKEQGPKGNIGGGSKSGVKENEPAPT-PTPAKRDNVVFQVTDKNFQKVVIESPVPVILDVYAEWCGPCKQLTPALEEAAMKSGGMFRVAKVDAEQQRNIAEVLGIKAYPSIFGVKNGIIVDNFVGILPQDEVR 357
            +LV MGWD + +  AL+    DV+ AAEALAA EEED ER+ +        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR+ALL QW +DIE +    +A KQ++     ++   P       +K   K  +  P  P PA + +VVF+ T +  Q++V+ESPVPV+LDVYA+WCGPCKQLTP LE+ A++SGGMFR+ K+D++Q+R+IAE+L ++A PS+F ++NG I++NFVG L  DE++
Sbjct:  113 ELVKMGWDPERAALALSAHNNDVVQAAEALAAEEEEDRERFSEALVAMAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQALLAQWLRDIEKQGGSERALKQYQMAGGKLRSAAPAAAAPQKAKPAAKPKDKGPAGPKPAAKKDVVFEATSETLQQLVVESPVPVLLDVYADWCGPCKQLTPMLEDMAVRSGGMFRLVKLDSQQERSIAELLKVEALPSVFALRNGAIINNFVGGLDADEMQ 380          
BLAST of mRNA_H-elongata_contig7968.15622.1 vs. uniprot
Match: W7TFJ6_9STRA (Thioredoxin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFJ6_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.790e-32
Identity = 61/104 (58.65%), Postives = 85/104 (81.73%), Query Frame = 0
Query:  254 PAKRDNVVFQVTDKNFQKVVIESPVPVILDVYAEWCGPCKQLTPALEEAAMKSGGMFRVAKVDAEQQRNIAEVLGIKAYPSIFGVKNGIIVDNFVGILPQDEVR 357
            PA   +VVF+VT+ + QK+VIESPVPV+LDVYAEWCGPCKQL P LE  A+K+GG+FR+AKVD+++ R I+E+LG++A PS+F  ++G +VDNFVG+  Q  ++
Sbjct:  464 PAAHADVVFEVTESDLQKIVIESPVPVLLDVYAEWCGPCKQLGPMLEAMAVKAGGLFRLAKVDSDKNRGISEMLGVQALPSVFAFRDGALVDNFVGMPQQATLQ 567          
BLAST of mRNA_H-elongata_contig7968.15622.1 vs. uniprot
Match: A0A7S3VBH3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VBH3_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.080e-31
Identity = 62/124 (50.00%), Postives = 93/124 (75.00%), Query Frame = 0
Query:  240 KSGVKENEPAPTPT--------PAKRDNVVFQVTDKNFQKVVIESPVPVILDVYAEWCGPCKQLTPALEEAAMKSGGMFRVAKVDAEQQRNIAEVLGIKAYPSIFGVKNGIIVDNFVGILPQDE 355
            KSG   ++PA  P         PAK+++V+FQ T +  QK+V+ESPVPV+LDVYA+WCGPCK LTPALE+ A+K GGMFR+ K++ +++RNI+  L +++ P++FG+++G IV +F G +P+DE
Sbjct:   45 KSGFDPSQPAAAPKAPPKGAPGPAKKEDVIFQATSETLQKLVLESPVPVLLDVYADWCGPCKALTPALEQMAIKGGGMFRLVKLNTDEERNISAALEVQSLPTVFGIRDGKIVHHFKG-MPRDE 167          
BLAST of mRNA_H-elongata_contig7968.15622.1 vs. uniprot
Match: A0A7S3Q836_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q836_9STRA)

HSP 1 Score: 135 bits (339), Expect = 3.710e-31
Identity = 62/124 (50.00%), Postives = 93/124 (75.00%), Query Frame = 0
Query:  240 KSGVKENEPAPTPT--------PAKRDNVVFQVTDKNFQKVVIESPVPVILDVYAEWCGPCKQLTPALEEAAMKSGGMFRVAKVDAEQQRNIAEVLGIKAYPSIFGVKNGIIVDNFVGILPQDE 355
            KSG   ++PA  P         PAK+++V+FQ T +  QK+V+ESPVPV+LDVYA+WCGPCK LTPALE+ A+K GGMFR+ K++ +++RNI+  L +++ P++FG+++G IV +F G +P+DE
Sbjct:  339 KSGFDPSQPAAAPKAPPKGAPGPAKKEDVIFQATSETLQKLVLESPVPVLLDVYADWCGPCKALTPALEQMAIKGGGMFRLVKLNTDEERNISAALEVQSLPTVFGIRDGKIVHHFKG-MPRDE 461          
BLAST of mRNA_H-elongata_contig7968.15622.1 vs. uniprot
Match: A0A7S2LZQ8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LZQ8_9STRA)

HSP 1 Score: 130 bits (326), Expect = 8.450e-30
Identity = 59/104 (56.73%), Postives = 84/104 (80.77%), Query Frame = 0
Query:  255 AKRDNVVFQVTDKNFQKVVIESPVPVILDVYAEWCGPCKQLTPALEEAAMKSGGMFRVAKVDAEQQRNIAEVLGIKAYPSIFGVKNGIIVDNFVGILPQDEVRL 358
            AK+++VVF+ T ++ QK+VIESPVPV+LD+YA+WCGPCKQLTPALE+  + +GG  R+ KV+ +QQR I+  L +KA P+IFG+KNG I+++F G +P+DE  L
Sbjct:   86 AKKEDVVFECTVEDLQKLVIESPVPVLLDIYADWCGPCKQLTPALEQIVINAGGALRLCKVNTDQQRQISGALEVKALPTIFGMKNGKILNSFQG-MPRDEQML 188          
BLAST of mRNA_H-elongata_contig7968.15622.1 vs. uniprot
Match: B8C987_THAPS (Thioredoxin domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C987_THAPS)

HSP 1 Score: 130 bits (328), Expect = 1.020e-29
Identity = 56/104 (53.85%), Postives = 86/104 (82.69%), Query Frame = 0
Query:  252 PTPAKRDNVVFQVTDKNFQKVVIESPVPVILDVYAEWCGPCKQLTPALEEAAMKSGGMFRVAKVDAEQQRNIAEVLGIKAYPSIFGVKNGIIVDNFVGILPQDE 355
            P PAK+++VVF+ T ++ QK+VIESPVPV+LDVYA+WCGPCKQLTPALE+  + +GGM R+ K++ +QQR I++ L +++ P++FG+K+G +++ F G +P+DE
Sbjct:  320 PKPAKKEDVVFEGTVEDLQKLVIESPVPVLLDVYADWCGPCKQLTPALEKICVNAGGMLRLVKINTDQQRQISQALEVRSLPTVFGIKDGKVMNMFQG-MPRDE 422          
BLAST of mRNA_H-elongata_contig7968.15622.1 vs. uniprot
Match: A0A448ZQ02_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQ02_9STRA)

HSP 1 Score: 128 bits (321), Expect = 8.030e-29
Identity = 56/104 (53.85%), Postives = 82/104 (78.85%), Query Frame = 0
Query:  252 PTPAKRDNVVFQVTDKNFQKVVIESPVPVILDVYAEWCGPCKQLTPALEEAAMKSGGMFRVAKVDAEQQRNIAEVLGIKAYPSIFGVKNGIIVDNFVGILPQDE 355
            P PAK+++VVF+ T    QK+V+ESPVPV+LDVYA+WCGPCK L PALE+ A+KSGGMFR+ K++++ +R +++ L + A P++FG+K+G IV  F G +P+ E
Sbjct:  288 PKPAKKEDVVFEATTDQLQKLVLESPVPVLLDVYADWCGPCKVLGPALEDMAIKSGGMFRLVKINSDNERPVSQALEVAALPTVFGIKDGKIVHKFEG-MPKSE 390          
BLAST of mRNA_H-elongata_contig7968.15622.1 vs. uniprot
Match: A0A7S4ARI3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ARI3_9STRA)

HSP 1 Score: 128 bits (321), Expect = 8.040e-29
Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = 0
Query:  244 KENEPAPTPTPAKRDNVVFQVTDKNFQKVVIESPVPVILDVYAEWCGPCKQLTPALEEAAMKSGGMFRVAKVDAEQQRNIAEVLGIKAYPSIFGVKNGIIVDNFVGILPQDE 355
            K NE    P PAK+++VVF+ T    Q++V+ESPVPV+LD+YA+WCGPCK L PALE+ A+KSGGMFR+ KV+++ +R +++ L + A P++FG+K+G IV  F G +P+ E
Sbjct:  278 KSNESNNLPKPAKKEDVVFEATTAELQQLVLESPVPVLLDIYADWCGPCKVLGPALEDMAIKSGGMFRLVKVNSDNERPVSQALEVTALPTVFGIKDGKIVHMFQG-MPKSE 388          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7968.15622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN57_ECTSI7.130e-8567.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL39_9PHAE7.770e-8058.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CN35_9STRA3.230e-4457.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TFJ6_9STRA3.790e-3258.65Thioredoxin n=2 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A7S3VBH3_9STRA1.080e-3150.00Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S3Q836_9STRA3.710e-3150.00Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S2LZQ8_9STRA8.450e-3056.73Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8C987_THAPS1.020e-2953.85Thioredoxin domain-containing protein n=1 Tax=Thal... [more]
A0A448ZQ02_9STRA8.030e-2953.85Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4ARI3_9STRA8.040e-2951.79Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..141
NoneNo IPR availableGENE3D1.10.8.10coord: 27..125
e-value: 8.0E-7
score: 31.0
NoneNo IPR availableGENE3D3.40.30.10coord: 250..358
e-value: 7.4E-26
score: 92.2
NoneNo IPR availablePANTHERPTHR45663:SF15THIOREDOXIN Y1, CHLOROPLASTIC-RELATEDcoord: 39..355
NoneNo IPR availablePANTHERPTHR45663FAMILY NOT NAMEDcoord: 39..355
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 261..355
e-value: 1.2E-21
score: 76.6
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 243..359
score: 12.237
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 281..299
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 79..123
score: 10.378
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 254..354
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 71..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7968contigH-elongata_contig7968:833..5225 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7968.15622.1mRNA_H-elongata_contig7968.15622.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7968 833..5225 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7968.15622.1 ID=prot_H-elongata_contig7968.15622.1|Name=mRNA_H-elongata_contig7968.15622.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=360bp
MHLPLAILQKFEVVCDGDVCERMPVGSPRAAQTADAASENFSKEHAAVVN
ASARAKYRATTPSGDDNEKKERRDPTGDGYEERVKDSGISQLVAMGWDTD
DSVTALADAGGDVLAAAEALAAREEEDLERYEDGLAEIKERGWDEDVAMS
AMREAGGNTTAAVLALEEEDRMLSMQFEQSVEEMVENGWDKEVARKALLM
QWQKDIESRADGRKAQKQFEKTVKGVKEQGPKGNIGGGSKSGVKENEPAP
TPTPAKRDNVVFQVTDKNFQKVVIESPVPVILDVYAEWCGPCKQLTPALE
EAAMKSGGMFRVAKVDAEQQRNIAEVLGIKAYPSIFGVKNGIIVDNFVGI
LPQDEVRLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR015940UBA
IPR036249Thioredoxin-like_sf
IPR009060UBA-like_sf