prot_H-elongata_contig79663.15620.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79663.15620.1
Unique Nameprot_H-elongata_contig79663.15620.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length135
Homology
BLAST of mRNA_H-elongata_contig79663.15620.1 vs. uniprot
Match: A0A6H5KFM7_9PHAE (RING-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFM7_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 1.990e-72
Identity = 112/135 (82.96%), Postives = 120/135 (88.89%), Query Frame = 0
Query:    1 MPISRCPYCDQDFGSDDGLFILPVEPYSAGMLFGDDKLRTREEHHQSRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCTDRPTGEEHIAKHRDAQKRLSDLEEV 135
            MPI RCP CD DFG+DDGLFILPVEPYSA   F +D+ +  +  HQSRTGRWHSYETMYAQRIVADF+AGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRC  RP GEEHIAKHR+AQKRLSDLEE+
Sbjct:  106 MPIVRCPVCDMDFGNDDGLFILPVEPYSATNFFEEDERKGGDREHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEM 240          
BLAST of mRNA_H-elongata_contig79663.15620.1 vs. uniprot
Match: D8LER0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER0_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 4.560e-72
Identity = 114/135 (84.44%), Postives = 122/135 (90.37%), Query Frame = 0
Query:    1 MPISRCPYCDQDFGSDDGLFILPVEPYSAGMLFGDDKLRTREEHHQSRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCTDRPTGEEHIAKHRDAQKRLSDLEEV 135
            MPI RCP CD DFG+DDGLFILPVEPYSA  LF +D+ + R+  HQSRTGRWHSYETMYAQRIVADF+AGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRC  RP GEEHIAKHR+AQKRLSDLEE+
Sbjct:  106 MPIVRCPVCDMDFGNDDGLFILPVEPYSATNLFEEDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEM 240          
BLAST of mRNA_H-elongata_contig79663.15620.1 vs. uniprot
Match: D8LLI7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLI7_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 3.330e-55
Identity = 100/143 (69.93%), Postives = 112/143 (78.32%), Query Frame = 0
Query:    1 MPISRCPYCDQDFGS--DDGLFILPVEPYS-AGMLFG----DDKLRTRE-EHHQSRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCTDRPTGEEHIAKHRDAQKRLSDLEEV 135
            MPI+RCP CDQ F +  D GL ILPVEP+S AG   G    D +   RE    Q+RTGRWHS+ETMYAQRIVADF+AGT+PL EGTKLGN LCNILNCSPSRLSKKLKIGKK FQ+  DRP   EHIA+HR+AQKRLSDLEE+
Sbjct:   61 MPITRCPVCDQAFPNTNDGGLLILPVEPFSDAGGATGESEDDSRTGAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEM 203          
BLAST of mRNA_H-elongata_contig79663.15620.1 vs. uniprot
Match: A0A836CDJ8_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ8_9STRA)

HSP 1 Score: 128 bits (322), Expect = 4.910e-34
Identity = 64/135 (47.41%), Postives = 85/135 (62.96%), Query Frame = 0
Query:    1 MPISRCPYCDQDFGSDDGLFILPVEPYSAGMLFGDDKLRTREEHHQSRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCTDRPTGEEHIAKHRDAQKRLSDLEEV 135
            +P+S CP C  D    +GL +LPVEP++       D         + RTGRWH YET YAQ ++ DFEAGT+P+ EGTKL   LC +LNC+ +RLSKKLKIGK+++     R    E IA H   Q+R+S+LEE+
Sbjct:   44 LPLSECPVCRADMTQSEGLQVLPVEPHNNEPAENADT--------ELRTGRWHHYETQYAQHLMEDFEAGTLPIGEGTKLATLLCRLLNCNQTRLSKKLKIGKRFYAHGPTRIRTPEAIAAHSVRQRRISELEEM 170          
BLAST of mRNA_H-elongata_contig79663.15620.1 vs. uniprot
Match: A0A835ZCD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD8_9STRA)

HSP 1 Score: 111 bits (277), Expect = 8.090e-26
Identity = 52/88 (59.09%), Postives = 68/88 (77.27%), Query Frame = 0
Query:   48 RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCTDRPTGEEHIAKHRDAQKRLSDLEEV 135
            RTGRWHSYET+YAQ ++ DFEAGT+P+ EGTKL + LC +LNC+ +RLSKKLKIGK+++     R    E IA HR  Q+R+S+LEE+
Sbjct:   68 RTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEM 155          
BLAST of mRNA_H-elongata_contig79663.15620.1 vs. uniprot
Match: A0A836CP88_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP88_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.610e-10
Identity = 31/65 (47.69%), Postives = 44/65 (67.69%), Query Frame = 0
Query:   48 RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQR 108
            R G+W   E  YA+R++A+F+AG +PL++GT L  FL  +LNC P R+SKK      IGK+ F+R
Sbjct:    5 RRGKWTQEEDAYARRLIAEFKAGLLPLTDGTTLRTFLSIMLNCDPMRISKKFTGAHCIGKQVFRR 69          
BLAST of mRNA_H-elongata_contig79663.15620.1 vs. uniprot
Match: A0A7S4J6Z5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J6Z5_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.420e-9
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   48 RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQRCT 110
            R G+W   E  YA R++ +F+AG +PL++GT L  FL  +LNC P R+SKK      IGK+ F+R T
Sbjct:   40 RRGKWTPEEESYANRLILEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRT 106          
BLAST of mRNA_H-elongata_contig79663.15620.1 vs. uniprot
Match: A0A1E7FJB7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FJB7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.800e-9
Identity = 43/95 (45.26%), Postives = 57/95 (60.00%), Query Frame = 0
Query:   46 QSRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQRCT---DRPTGEEHIAKHRDAQKRLSDLE 133
            Q R G+W   E  YA R++ +F+AG +PL++GT L  FL  +LNC P R+SKK      IGK+ F+R T   +R T E+ I K R     LSDLE
Sbjct:   46 QLRRGKWTPEEEAYANRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRTADLNRLTPEQ-IQKSR---AELSDLE 136          
BLAST of mRNA_H-elongata_contig79663.15620.1 vs. uniprot
Match: A0A448Z703_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z703_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.410e-9
Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 0
Query:   46 QSRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQRCT 110
            Q R G+W   E  YA R++ +F+AG +PL++GT L  FL  +LNC P R+SKK      IGK+ F+R T
Sbjct:  101 QLRRGKWTPEEEAYANRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRT 169          
BLAST of mRNA_H-elongata_contig79663.15620.1 vs. uniprot
Match: A0A7S2NX07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NX07_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.510e-9
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   48 RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQRCT 110
            R G+W   E  YA R++ +F+AG +PL++GT L  FL  +LNC P R+SKK      IGK+ F+R T
Sbjct:  162 RRGKWTPEEEAYANRLILEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRT 228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79663.15620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFM7_9PHAE1.990e-7282.96RING-type domain-containing protein (Fragment) n=1... [more]
D8LER0_ECTSI4.560e-7284.44RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LLI7_ECTSI3.330e-5569.93RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CDJ8_9STRA4.910e-3447.41RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835ZCD8_9STRA8.090e-2659.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CP88_9STRA1.610e-1047.69Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S4J6Z5_9STRA1.420e-946.27Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A1E7FJB7_9STRA1.800e-945.26Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A448Z703_9STRA2.410e-946.38Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2NX07_9STRA2.510e-946.27Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35213FAMILY NOT NAMEDcoord: 45..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79663contigH-elongata_contig79663:39..1088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79663.15620.1mRNA_H-elongata_contig79663.15620.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79663 39..1106 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79663.15620.1 ID=prot_H-elongata_contig79663.15620.1|Name=mRNA_H-elongata_contig79663.15620.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
MPISRCPYCDQDFGSDDGLFILPVEPYSAGMLFGDDKLRTREEHHQSRTG
RWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK
IGKKYFQRCTDRPTGEEHIAKHRDAQKRLSDLEEV
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