prot_H-elongata_contig79658.15618.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79658.15618.1
Unique Nameprot_H-elongata_contig79658.15618.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length231
Homology
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BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Match: D7G351_ECTSI (G-patch domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G351_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 1.110e-40
Identity = 105/231 (45.45%), Postives = 122/231 (52.81%), Query Frame = 0 
Query:    1 MGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTHFPTHVPSQELNAPDGKSDAVRAQEALDRRRRGINGDSRSVGRRYAIRKEQG--PRTRCDEQGXXXXXXXXXDRRIKGGVSCRDKGVPTEGRESVAEGVTRGFWGQQTHPGTVPAVAVAATIPGGDAHTRAGW---ARLKGAQKSRRGIGSGAFMSKGEQRRREERERRKEHKTRLELFSDVPEELASL 226
            MGWKLDEGLG+R QGRV+PLQTTFKRDT GLGAG +LRPRVTHFP+HVPSQ LNAPDGKSDAVRA E LDR R  + G            ++ G     R D  G           R  GG +  D                 GFWGQ TH                   + A      R +G  KS  G  +G+F+++ E+    ERERRKE   R EL SDVPEE A+L
Sbjct:  156 MGWKLDEGLGSRKQGRVNPLQTTFKRDTTGLGAGGKLRPRVTHFPSHVPSQALNAPDGKSDAVRAHERLDRGR--LGGXXXXXXXXXXXXRDGGGCSGNRLDASGESSGVNAEPSARAGGGGAAGDS--------------WGGFWGQGTHSXXXXXXXXXXXXCRSTGESTAXXXXAGRREGRGKS--GHETGSFLTRREREAELERERRKERTARFELLSDVPEEYAAL 368
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BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Match: A0A8H7S4I8_9FUNG (G-patch domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S4I8_9FUNG)

HSP 1 Score: 56.6 bits (135), Expect = 3.710e-6
Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 0 
Query:    1 MGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTHFPTHVPSQ 51
             GWK +EGLG +GQGR  P+ T  K+DT GLG  +  + R+TH  T +  Q
Sbjct:  128 QGWKYEEGLGPKGQGRRHPIATALKQDTLGLGHEKSTKRRITHTATEIEEQ 178
[Close]
BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Match: UPI000540165A (G patch domain and ankyrin repeat-containing protein 1 homolog n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI000540165A)

HSP 1 Score: 51.2 bits (121), Expect = 7.330e-5
Identity = 28/77 (36.36%), Postives = 46/77 (59.74%), Query Frame = 0 
Query:    2 GWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTHFPTHVPSQ----ELNAPDGKSDAVRAQEALDRRRR 74
            GWK   GLGA  QGR++P++T FK++  G+GA E+++ ++ H  T  PS     E  +   K+ + R ++ LD  +R
Sbjct:   29 GWKEGTGLGASQQGRLEPVETYFKKNKRGVGA-EKVKKKILHLSTTTPSDKEKPEKMSKKAKALSKRMRKMLDEEKR 104
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79658.15618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G351_ECTSI1.110e-4045.45G-patch domain-containing protein n=2 Tax=Ectocarp... [more]
A0A8H7S4I8_9FUNG3.710e-647.06G-patch domain-containing protein n=1 Tax=Mucor ci... [more]
UPI000540165A7.330e-536.36G patch domain and ankyrin repeat-containing prote... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000467G-patch domainPFAMPF01585G-patchcoord: 1..33
e-value: 3.4E-9
score: 36.4
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 1..36
score: 11.878
IPR039146G patch domain and ankyrin repeat-containing protein 1PANTHERPTHR20923BAT4 PROTEIN-RELATEDcoord: 1..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79658contigH-elongata_contig79658:591..1283 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79658.15618.1mRNA_H-elongata_contig79658.15618.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79658 285..2628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79658.15618.1 ID=prot_H-elongata_contig79658.15618.1|Name=mRNA_H-elongata_contig79658.15618.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=231bp
MGWKLDEGLGARGQGRVDPLQTTFKRDTAGLGAGERLRPRVTHFPTHVPS
QELNAPDGKSDAVRAQEALDRRRRGINGDSRSVGRRYAIRKEQGPRTRCD
EQGGGGGGHYHHDRRIKGGVSCRDKGVPTEGRESVAEGVTRGFWGQQTHP
GTVPAVAVAATIPGGDAHTRAGWARLKGAQKSRRGIGSGAFMSKGEQRRR
EERERRKEHKTRLELFSDVPEELASLLLSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
IPR039146GPANK1