prot_H-elongata_contig79646.15617.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79646.15617.1
Unique Nameprot_H-elongata_contig79646.15617.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig79646.15617.1 vs. uniprot
Match: A0A6H5KHP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP7_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 4.290e-29
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    2 KGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 53
            KGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL
Sbjct:  998 KGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 1049          
BLAST of mRNA_H-elongata_contig79646.15617.1 vs. uniprot
Match: D8LDI0_ECTSI (Ci-SWI/SNF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI0_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 4.290e-29
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    2 KGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 53
            KGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL
Sbjct:  964 KGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 1015          
BLAST of mRNA_H-elongata_contig79646.15617.1 vs. uniprot
Match: A0A835ZE29_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE29_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.400e-25
Identity = 45/52 (86.54%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    2 KGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 53
            KGK +TEEEDAFL+NMMHRYGYGNWEVIR +I+KAWQF FDWFFKSRNAAEL
Sbjct:  873 KGKTYTEEEDAFLINMMHRYGYGNWEVIRTQIKKAWQFHFDWFFKSRNAAEL 924          
BLAST of mRNA_H-elongata_contig79646.15617.1 vs. uniprot
Match: A0A7S4E930_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E930_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.660e-25
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 NKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 53
            ++GKV+TEEEDAFLLNMMH YGYGNWE IR+EIR AWQF FDWFFKSRNA+EL
Sbjct:  129 SRGKVWTEEEDAFLLNMMHTYGYGNWERIRVEIRNAWQFNFDWFFKSRNASEL 181          
BLAST of mRNA_H-elongata_contig79646.15617.1 vs. uniprot
Match: A0A8J2SZN3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZN3_9STRA)

HSP 1 Score: 102 bits (254), Expect = 4.290e-24
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 NKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 53
            ++GKV+TEEEDAFLLNMMH YGYGNWE IR+EIR AWQF FDWFFKSRNA+EL
Sbjct:  978 SRGKVWTEEEDAFLLNMMHTYGYGNWERIRVEIRNAWQFNFDWFFKSRNASEL 1030          
BLAST of mRNA_H-elongata_contig79646.15617.1 vs. uniprot
Match: F0YAG6_AURAN (Uncharacterized protein RUV1 n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAG6_AURAN)

HSP 1 Score: 100 bits (249), Expect = 2.030e-23
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 NKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 53
            ++GKV+TEEEDAFL+NMMH YGYGNWE IR+EIR AWQF FDWFFKSRNA EL
Sbjct:  883 SRGKVWTEEEDAFLVNMMHTYGYGNWERIRVEIRNAWQFNFDWFFKSRNAQEL 935          
BLAST of mRNA_H-elongata_contig79646.15617.1 vs. uniprot
Match: A0A7S1BGS6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGS6_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 4.570e-22
Identity = 41/52 (78.85%), Postives = 48/52 (92.31%), Query Frame = 0
Query:    2 KGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 53
            KG+ +TEEEDAFL++MM R+G+G+WE IRMEIRKAWQFRFDWFFKSRNA EL
Sbjct:  647 KGRAYTEEEDAFLVSMMFRHGFGSWERIRMEIRKAWQFRFDWFFKSRNAVEL 698          
BLAST of mRNA_H-elongata_contig79646.15617.1 vs. uniprot
Match: A0A6U0WH08_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WH08_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 6.250e-22
Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 NKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 53
            NKGK++T EED FL+NMMHR+GYG WE IR+EIR+AWQFRFDW+FKSRN  E+
Sbjct: 1001 NKGKMYTLEEDVFLINMMHRHGYGEWERIRLEIRRAWQFRFDWYFKSRNVNEI 1053          
BLAST of mRNA_H-elongata_contig79646.15617.1 vs. uniprot
Match: A0A7S1XXH0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXH0_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 8.780e-22
Identity = 37/52 (71.15%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    2 KGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 53
            KGK++T EED FL+NMMHR+GYG WE IR+E+R+AWQFRFDW+FKSR+A E+
Sbjct:  187 KGKMYTLEEDVFLINMMHRHGYGEWERIRLEVRRAWQFRFDWYFKSRSAPEI 238          
BLAST of mRNA_H-elongata_contig79646.15617.1 vs. uniprot
Match: A0A2J7YNC1_9CHLO (Putative chromatin-remodeling complex ATPase chain (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7YNC1_9CHLO)

HSP 1 Score: 87.4 bits (215), Expect = 1.550e-21
Identity = 35/53 (66.04%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 NKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 53
            NKGK +TEEED F+L M+H+ GYGNW+ ++ EIRK+W+FRFDWFFKSR   EL
Sbjct:   22 NKGKAYTEEEDRFILCMVHKLGYGNWDDLKAEIRKSWRFRFDWFFKSRTPQEL 74          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79646.15617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHP7_9PHAE4.290e-29100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDI0_ECTSI4.290e-29100.00Ci-SWI/SNF n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A835ZE29_9STRA1.400e-2586.54P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4E930_9STRA1.660e-2583.02Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2SZN3_9STRA4.290e-2483.02Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0YAG6_AURAN2.030e-2381.13Uncharacterized protein RUV1 n=2 Tax=Aureococcus a... [more]
A0A7S1BGS6_9STRA4.570e-2278.85Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A6U0WH08_9STRA6.250e-2273.58Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XXH0_9STRA8.780e-2271.15Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A2J7YNC1_9CHLO1.550e-2166.04Putative chromatin-remodeling complex ATPase chain... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015195SLIDE domainPFAMPF09111SLIDEcoord: 1..53
e-value: 4.3E-23
score: 81.5
NoneNo IPR availableGENE3D1.10.10.60coord: 1..53
e-value: 1.0E-22
score: 81.9
NoneNo IPR availablePANTHERPTHR10799:SF979coord: 2..52
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 2..52
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 1..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79646contigH-elongata_contig79646:1180..1865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79646.15617.1mRNA_H-elongata_contig79646.15617.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79646 1180..1865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79646.15617.1 ID=prot_H-elongata_contig79646.15617.1|Name=mRNA_H-elongata_contig79646.15617.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
NKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNA
AEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015195SLIDE
IPR009057Homeobox-like_sf