prot_H-elongata_contig79628.15615.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79628.15615.1
Unique Nameprot_H-elongata_contig79628.15615.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length265
Homology
BLAST of mRNA_H-elongata_contig79628.15615.1 vs. uniprot
Match: A0A6H5KTC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC5_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 1.230e-113
Identity = 184/256 (71.88%), Postives = 199/256 (77.73%), Query Frame = 0
Query:    9 SEKKVRVCTICYRAGENFRKALLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAAAGGNLNILAWLVEDRCCPLFLDRAKKVALGDMRRLSVMGAAAAAGHIQIMRYLAFTQGCKVTEIRDMGTLWRSLEKCLYEGADVPTGVQCLSPDMSRLLQANSLGPRRSGGSSPTTGRGGSSGDGYLGSTIGSGSGGAEVAAAIEDDDDSCIVCFERKVDCTLVPCGHHCCCFTCAAQFEQCPVCRADVTQKIRTISV 264
            SEKKVRVC+ CY AGE+FRKA LSGSEEGAMAA+STGCVNLRVPYTIYHNELPVHCAA+GGNLNILAWLV+DRCCPLFLDR KK+ALGD RRLSVMGAAAA+GH+QIMRYLAFTQGCKVTEIRDMG+LWR+LEKCLY+GA+V   V       SR+   NS  P  S                             EVAA + DDD+ CIVCFERKVDCTLVPCGHHCCC TCAAQFEQCPVCRADV QKIR ISV
Sbjct:  429 SEKKVRVCSTCYVAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCLYDGANV---VPETGGHRSRISN-NSGTP--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEVAAPLGDDDNMCIVCFERKVDCTLVPCGHHCCCLTCAAQFEQCPVCRADVEQKIRAISV 678          
BLAST of mRNA_H-elongata_contig79628.15615.1 vs. uniprot
Match: A0A6H5KTY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY3_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 4.800e-67
Identity = 131/265 (49.43%), Postives = 165/265 (62.26%), Query Frame = 0
Query:    4 PPLPRSEK---KVRVCTICYRAGENFRKALLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAAAGGNLNILAWLVEDRCCPLFLDRAKKVALGDMRRLSVMGAAAAAGHIQIMRYLAFTQGCKVTEIRDMGTLWRSLEKCLYEGADVPTGVQCLSPDMSRLLQANSLGPRRSGGSSPTTGRGGSSGDGYLGSTIGSGSGGAEVAAAIE-DDDDSCIVCFERKVDCTLVPCGHHCCCFTCAAQFEQCPVCRADVTQKIRTISV 264
            PP   SE+   ++RVC  C  A E FR ALL G  E AM+AYSTGCVNL  PYT++H ELPVHCAAAGGN+ +L+WLVE+  CP+F D  KKV + D+R L+V+GAAA  G +Q MRYL   QGC V+EI+ + TL  +L+ CL+  A      +    + SR  +AN   P   G +               G   GS S  +   AA E + D+ CIVCF+ +VDCTLVPCGHHCCC TCA++F  CPVCR  VT KI+TI V
Sbjct:  548 PPRYASERDGFRMRVCKTCNAAMEAFRTALLLGRAEDAMSAYSTGCVNLDRPYTVFHGELPVHCAAAGGNVGLLSWLVEELGCPIFTDSDKKVPIKDLRSLTVLGAAAVNGQVQAMRYLVNQQGCSVSEIKHLPTLKIALDACLHGSA------KTRDAERSRY-RANGNDPDPLGSAG--------------GVCFGSRSTASLTTAAAEVETDNCCIVCFDNEVDCTLVPCGHHCCCITCASKFSLCPVCRTTVTHKIKTIPV 791          
BLAST of mRNA_H-elongata_contig79628.15615.1 vs. uniprot
Match: D8LDN0_ECTSI (Zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN0_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 6.500e-54
Identity = 102/167 (61.08%), Postives = 116/167 (69.46%), Query Frame = 0
Query:  104 MGAAAAAGHIQIMRYLAFTQGCKVTEIRDMGTLWRSLEKCLYEGADVPTGVQCLSPDMSRLLQANSLGP------RRSGGSSPTTGRGGSSGDGYLGSTIGSGSGGAEVAAAIEDDDDSCIVCFERKVDCTLVPCGHHCCCFTCAAQFEQCPVCRADVTQKIRTISV 264
            MGAAAA+GH+QIMRYLAFTQGCKVTEIRDMG+LWR+LEKCLY+GA+V   V       SR+  +NS G                                G+ +GGAEV+A + DDD++CIVCFERKVDCTLVPCGHHCCC TCAAQFEQCPVCRADV QKIR ISV
Sbjct:    1 MGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCLYDGANV---VPETGGHRSRI--SNSSGTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAATGGAEVSAPLGDDDNTCIVCFERKVDCTLVPCGHHCCCLTCAAQFEQCPVCRADVEQKIRAISV 162          
BLAST of mRNA_H-elongata_contig79628.15615.1 vs. uniprot
Match: A0A6H5KUU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU5_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 4.720e-50
Identity = 121/337 (35.91%), Postives = 163/337 (48.37%), Query Frame = 0
Query:    9 SEKKVRVCTICYRAGENFRKALLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAAAGGNLNILAWLVEDRCCPLFLDRAKKVALGDMRRLSVMGAAAAAGHIQIMRYLAFTQGCKVTEIRDMGTLWRSLEKCLYEGADVPTGVQCLSPDMSRL----LQANSLGPRRSGGSSPTTGRG---------GSSGD---GYLGSTIGSGSGGAEVAAAIEDDDD-----------------------------------------------------------------SCIVCFERKVDCTLVPCGHHCCCFTCA-AQFEQCPVCRADVTQKIRTIS 263
            +E++VRVC  CY  G++FR+ALL GS +GAM AY TGCVNLR P++    ELPVHCAAAGGN++++ WLVEDRCCP+F+D  K +   D    SVM AAA +G +++MRYL+FTQ    + +  M   WR L+ CL    D     +    D + L    +  +   P+  GGS    G           GSS D    +  +T  S  GG   ++ +E  D                                                                  +CIVCF+R V+CT +PCGHHCCC  CA + F  CPVCR  + +KI+TIS
Sbjct:  639 TERRVRVCRTCYSVGKSFRRALLRGSYQGAMEAYGTGCVNLRAPFS--DRELPVHCAAAGGNVSLMMWLVEDRCCPIFMDDEKTMPHLDGAGRSVMAAAADSGRVEMMRYLSFTQPSAASGM-GMAPFWRGLQACLRNDEDKHDDDRGRGRDRAPLEXGYMGTSHPEPKERGGSRDAGGDDDGGKSCYPVGSSADRSPAWRSNTPSSAVGGGNGSSGVEGSDTFLDTSFVGMRAGAGXXXXTGDRDPFQAALEMSVAEAGYSIYELTSGKGXXXXXXXXXXXXXXXXXACIVCFDRPVNCTFMPCGHHCCCMPCAESMFNLCPVCRVAIDKKIKTIS 972          
BLAST of mRNA_H-elongata_contig79628.15615.1 vs. uniprot
Match: D7FYF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF4_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 3.350e-49
Identity = 123/332 (37.05%), Postives = 164/332 (49.40%), Query Frame = 0
Query:    9 SEKKVRVCTICYRAGENFRKALLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAAAGGNLNILAWLVEDRCCPLFLDRAKKVALGDMRRLSVMGAAAAAGHIQIMRYLAFTQGCKVTEIRDMGTLWRSLEKCLYEGADVPTGVQCLSPDMSRLLQANSLGPRRSGGSSPTTGRG---------GSSGD-------GYLGSTIG--SGSGGAE---------------------------VAAAIE-------------------------------DDDDSCIVCFERKVDCTLVPCGHHCCCFTCA-AQFEQCPVCRADVTQKIRTIS 263
            +E++VRVC  CY  G+ FR+ALL GS +GAM A+ TGCVNLR P++    ELPVHCAAAGGN++++ WL+EDRCCP+F+D  K +   D    SVM AAA +G +++MRYL FTQ    + +  M   WR L+ CL    D     +    D + L   +   P+  GGS    G           GSS D          GS +G  +GSGG E                           + AA+E                                  ++CIVCF+R V+CT VPCGHHCCC  CA ++   CPVC   + +KI+TIS
Sbjct:  569 TERRVRVCRTCYSVGKAFRRALLRGSYQGAMEAHGTGCVNLRAPFS--DRELPVHCAAAGGNVSLMMWLLEDRCCPIFMDDEKTMPHLDGAGRSVMAAAADSGRVEMMRYLTFTQPSAASGM-GMAPFWRGLQACLRNDEDKHDDDRGRGRDRAPLEGTSHPEPKGRGGSRDAGGGDDGGKSCYPVGSSADRNPAWRSNAPGSAVGGGNGSGGVEGCDTFLAGMRAGAXXXXXXXXXXDRDPLQAALEMSVVEAGYSIYELTTGKDGSGXXXXXXXXXMKGKNACIVCFDRPVNCTFVPCGHHCCCMPCAESKLNLCPVCGVAIDKKIKTIS 897          
BLAST of mRNA_H-elongata_contig79628.15615.1 vs. uniprot
Match: D8LDM9_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM9_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 8.300e-47
Identity = 75/84 (89.29%), Postives = 80/84 (95.24%), Query Frame = 0
Query:    9 SEKKVRVCTICYRAGENFRKALLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAAAGGNLNILAWLVEDRCCPLFLDRAKK 92
            SEKKVRVC+ CY AGE+FRKA LSGSEEGAMAA+STGCVNLRVPYTIYHNELPVHCAA+GGNLNILAWLV+DRCCPLFLDR KK
Sbjct:  105 SEKKVRVCSSCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKK 188          
BLAST of mRNA_H-elongata_contig79628.15615.1 vs. uniprot
Match: A0A836CC14_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC14_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.810e-43
Identity = 76/151 (50.33%), Postives = 96/151 (63.58%), Query Frame = 0
Query:    8 RSEKKVRVCTICYRAGENFRKALLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAAAGGNLNILAWLVEDRCCPLFLDRAKKVALGDMRRLSVMGAAAAAGHIQIMRYLAFTQGCKVTEIRDMGTLWRSLEKCLYEGADVPTGVQCLS 158
            + E+K R+C  C    E FR ALL+G +  A AAY  GCVNLR PY+IY N LPVHCAA GG++ +LAWL+E++ CPLF D ++ +ALG+ R+ SVM  AA  GH  IMRYL      KV EI D   LWR+L+K L E +    G    S
Sbjct:   83 KQERKCRICDTCAETNEAFRAALLAGDDAAARAAYRRGCVNLRCPYSIYLNGLPVHCAAEGGSMALLAWLLEEKHCPLFKDLSRTIALGNGRKESVMAVAAQNGHTHIMRYLLHKHSVKVNEITDHKALWRALDKALRESSAQELGTSAAS 233          
BLAST of mRNA_H-elongata_contig79628.15615.1 vs. uniprot
Match: A0A7S3YF48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF48_HETAK)

HSP 1 Score: 138 bits (347), Expect = 8.200e-35
Identity = 93/264 (35.23%), Postives = 140/264 (53.03%), Query Frame = 0
Query:   10 EKKVRVCTICYRAGENFRKALLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAAAGGNLNILAWLVEDRCCPLFLDRAKKVALGDMRRL-SVMGAAAAAGHIQIMRYLAFTQGCKVTEIRDMGTLWRSLEKCLYEGADVPTGVQCLSPDMSRLL---QANSLGPRRSG-----GSSPTTGRGGSSGDGYLGSTIGSGSGGAEVAAAIEDDDDSCIVCFERKVDCTLVPCGHHCCCFTCAAQFEQCPVCRADVTQKIRTISV 264
            EKK RVC  C  A E+FR AL  G   G  AAY+TG VNLR PYT++  E PVHCAAAGG+L +LAWLV++R   +   ++K+  L     + S M  AA  G++++MR+L   + C V +I ++   + + EK L   +    G     P  + L+   +     P++S      GS+P +     S    +  + G    G    +    +++ C++CFE  ++  +VPCGH   C  C+ +F +CPVCR  V Q I+T  V
Sbjct:  129 EKKARVCRGCQWAMEDFRAALRRGDAPGVRAAYATGVVNLRTPYTVHGGEYPVHCAAAGGSLPLLAWLVDERGAFVRDPQSKQRPLFASDGITSCMSLAAVNGNLEMMRWLTQHE-CSVRDIVNLEHFYAATEKLLALPSTGTAGPLNSEPVAAALVDNARPPPFNPQQSVVVASVGSTPISAPSFES----ITPSAGIEQQGVTAVSGAGMEENECVICFENNINTVIVPCGHTAVCDGCSGKFTECPVCREPVQQVIKTFGV 387          
BLAST of mRNA_H-elongata_contig79628.15615.1 vs. uniprot
Match: D7FYF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF5_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 1.880e-32
Identity = 70/149 (46.98%), Postives = 91/149 (61.07%), Query Frame = 0
Query:   12 KVRVCTICYRAGENFRKALLSGSEEGAMAAYSTGCVNLRVPYTIYHNELPVHCAAAGGNLNILAWLVEDRCCPLFLDRAKKVALGDMRRLSVMGAAAAAGHIQIMRYLAFTQGCKVTEIRDMGTLWRSLEKCLYEGADVPTGVQCLSPD 160
            ++RVC  C  A E FR ALL G  E AM+AYSTGCVNL  PYT++H ELPVHCAAAGGN+ +L+WLVE+  C +F D  KKV + D+R L+V+GAAA                  V EI+ + TL  +L+ CL+  A     ++  S D
Sbjct:  557 RMRVCKTCNAAMEAFRTALLLGRAEDAMSAYSTGCVNLDRPYTVFHGELPVHCAAAGGNVGLLSWLVEELGCSIFTDSDKKVPIRDLRSLTVLGAAAVNXXXXXXXXXXXXXXXXVLEIKHLPTLKIALDACLHGSAKTRVTLELQSGD 705          
BLAST of mRNA_H-elongata_contig79628.15615.1 vs. uniprot
Match: A0A448ZK47_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZK47_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.970e-28
Identity = 81/256 (31.64%), Postives = 125/256 (48.83%), Query Frame = 0
Query:    8 RSEKKVRVCTICYRAGENFRKALLSGSEEGAMAAYSTGCVNLRVPYTIYHNE-----LPVHCAAAGGNLNILAWLVEDRCCPLFLDRA--KKVALGDM-----RRLSVMGAAAAAGHIQIMRYLAFTQGCKVTEIRDMGTLWRSLEKCLYEGADVPTGVQCLSPDMSRLLQANSLGPRRSGGSSPTTGRGGSSGDGYLGSTIGSGSGGAEVAAAIEDDDDSCIVCFERKVDCTLVPCGHHCCCFTCAAQFEQCPVC 251
            + E +V++C  C      F++ALL G  E A+A Y TG +NLR P+  + ++      P+HCA  GGNL+I+ WL+ED  CP+ L R   KK A  D      +  S +  A  A H+ ++RYL   +G  V E +D+    R+LE  L     +P+ +     D       + +     GG+S  +  G  +   + GS         + +A+   D + CI+C +  +DC + PCGH  CC  C+     CPVC
Sbjct:  515 KKESQVKICKSCNFLSGAFKRALLEGDYEEAVALYGTGNINLRTPFPQFSSKKEEVMYPIHCAVEGGNLDIVQWLMEDHFCPVKLIRTGGKKAANQDFPILTSKNRSALTIAMDALHVNVLRYLVVDKGVSVYESKDLKGSLRALEAVLNA---IPSSIGEYRSDGFNHRWDDEV---FDGGTSVASSLGADAT--FSGSEF-------DGSASKRTDAEKCILCCDNTIDCVITPCGHQICCLKCSKNLSTCPVC 755          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79628.15615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTC5_9PHAE1.230e-11371.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTY3_9PHAE4.800e-6749.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDN0_ECTSI6.500e-5461.08Zinc finger protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KUU5_9PHAE4.720e-5035.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF4_ECTSI3.350e-4937.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDM9_ECTSI8.300e-4789.29FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CC14_9STRA2.810e-4350.33FYVE-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S3YF48_HETAK8.200e-3535.23Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FYF5_ECTSI1.880e-3246.98FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A448ZK47_9STRA2.970e-2831.64Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 204..263
e-value: 1.9E-14
score: 54.8
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 214..257
e-value: 7.8E-11
score: 41.7
NoneNo IPR availablePANTHERPTHR14879CASPASE REGULATOR, RING FINGER DOMAIN-CONTAININGcoord: 211..260
NoneNo IPR availablePANTHERPTHR14879:SF5E3 UBIQUITIN-PROTEIN LIGASE CBLAcoord: 211..260
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 212..258
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 217..252
score: 11.117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79628contigH-elongata_contig79628:132..2848 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79628.15615.1mRNA_H-elongata_contig79628.15615.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79628 132..2848 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79628.15615.1 ID=prot_H-elongata_contig79628.15615.1|Name=mRNA_H-elongata_contig79628.15615.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=265bp
PPPPPLPRSEKKVRVCTICYRAGENFRKALLSGSEEGAMAAYSTGCVNLR
VPYTIYHNELPVHCAAAGGNLNILAWLVEDRCCPLFLDRAKKVALGDMRR
LSVMGAAAAAGHIQIMRYLAFTQGCKVTEIRDMGTLWRSLEKCLYEGADV
PTGVQCLSPDMSRLLQANSLGPRRSGGSSPTTGRGGSSGDGYLGSTIGSG
SGGAEVAAAIEDDDDSCIVCFERKVDCTLVPCGHHCCCFTCAAQFEQCPV
CRADVTQKIRTISV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING