prot_H-elongata_contig7957.15609.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig7957.15609.1
Unique Name	prot_H-elongata_contig7957.15609.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	164

Homology

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BLAST of mRNA_H-elongata_contig7957.15609.1 vs. uniprot
Match: A0A6H5JEJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ2_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 9.110e-82
Identity = 122/162 (75.31%), Postives = 143/162 (88.27%), Query Frame = 0

Query:    1 MLMDLVCKSCGELMDDAVKKNMRIRVLTSDTSKLPERVLESIRKTEEETRDCTGFLFNICLSYGARQEIANACREIATEVERGTTSLDAINEMTVERHLSTAGLPDPDVLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPEVTKNDIMEMFEDYQQRERRFG 162
            +LMDLVC SCGELM+DA KKNMRIRVL SD +KLPERVL +I+K E+ TRDCTGFLFNICLSYGARQE+ANACR+IA EV  G TSLD ++E  VERHL T GLPDPD+LIRTSGEKRVSNFLLFQMAYTELFFVDKLWP++T+ D++++FE ++ R+RRFG
Sbjct:  244 LLMDLVCTSCGELMEDAGKKNMRIRVLASDATKLPERVLSAIQKAEDATRDCTGFLFNICLSYGARQELANACRQIAQEVASGATSLDLVDEYAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITRRDVLDIFEAFKTRKRRFG 405

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BLAST of mRNA_H-elongata_contig7957.15609.1 vs. uniprot
Match: D8LMG7_ECTSI (Alkyl transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG7_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.520e-65
Identity = 97/131 (74.05%), Postives = 116/131 (88.55%), Query Frame = 0

Query:   32 SKLPERVLESIRKTEEETRDCTGFLFNICLSYGARQEIANACREIATEVERGTTSLDAINEMTVERHLSTAGLPDPDVLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPEVTKNDIMEMFEDYQQRERRFG 162
            S+LPERVL +I+K E+ TRDCTGFLFNICLSYGARQE+ANACR+IA EV  G TSLD ++E  VERHL T GLPDPD+LIRTSGEKRVSNFLLFQMAYTELFFVDKLWP++T+ D++++FE ++ R+RRFG
Sbjct:   17 SQLPERVLSAIQKAEDATRDCTGFLFNICLSYGARQEMANACRQIAQEVASGVTSLDLVDECAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITRRDVLDIFEAFKTRKRRFG 147

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BLAST of mRNA_H-elongata_contig7957.15609.1 vs. uniprot
Match: A0A0W8CW88_PHYNI (Alkyl transferase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CW88_PHYNI)

HSP 1 Score: 184 bits (466), Expect = 1.560e-55
Identity = 87/162 (53.70%), Postives = 127/162 (78.40%), Query Frame = 0

Query:    2 LMDLVCKSCGELMDDAVKKNMRIRVLTSDTSKLPERVLESIRKTEEETRDCTGFLFNICLSYGARQEIANACREIATEVERGTTSLDAINEMTVERHLSTAGLPDPDVLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPEVTKNDIMEMFEDYQQRERRFGR 163
            LM+L  +   E++ +A+K+++R+RVL SD  KLP  ++E+I + E +T++C+ F  N+C+SYGAR EI  ACR+IATEV RG TS++ INE  V + + TAGLPDPD+LIRTSGE R+SNFLLFQ+AY+EL F+DK+WPE+TK+D+  +  ++ +R+RRFG+
Sbjct:   86 LMNLFNQFMHEIVPEALKRDVRVRVLVSDGRKLPAYIVEAIEEIETKTQNCSKFSLNLCVSYGARDEIVGACRKIATEVVRGETSVEDINEDLVSQRMLTAGLPDPDILIRTSGELRISNFLLFQIAYSELIFMDKMWPEMTKDDVEGIIMEFNRRKRRFGK 247

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BLAST of mRNA_H-elongata_contig7957.15609.1 vs. uniprot
Match: A0A3R7NKM6_9STRA (Alkyl transferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NKM6_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.520e-55
Identity = 89/162 (54.94%), Postives = 124/162 (76.54%), Query Frame = 0

Query:    2 LMDLVCKSCGELMDDAVKKNMRIRVLTSDTSKLPERVLESIRKTEEETRDCTGFLFNICLSYGARQEIANACREIATEVERGTTSLDAINEMTVERHLSTAGLPDPDVLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPEVTKNDIMEMFEDYQQRERRFGR 163
            LM+L  +   E++ +A+K+++R+RVL SD  KLP  ++ESI + E +T  CT F  NIC+SYGAR EI  ACR+IATEV  G TS++ INE  + + + TAGLPDPD+LIRTSGE R+SNFLLFQ+AY+EL F+DK+WPE+TKND+  +  ++ +R+RRFG+
Sbjct:  177 LMNLFNEFMHEIVPEALKRDIRVRVLVSDGRKLPTYIVESIEQIETQTSRCTAFNLNICVSYGARDEIVGACRKIATEVANGETSIEDINEDLLGQRMLTAGLPDPDILIRTSGELRISNFLLFQIAYSELIFLDKMWPEMTKNDVQAIIVEFNRRKRRFGK 338

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BLAST of mRNA_H-elongata_contig7957.15609.1 vs. uniprot
Match: W2PTH8_PHYPN (Alkyl transferase n=10 Tax=Phytophthora TaxID=4783 RepID=W2PTH8_PHYPN)

HSP 1 Score: 186 bits (471), Expect = 4.760e-55
Identity = 88/162 (54.32%), Postives = 127/162 (78.40%), Query Frame = 0

Query:    2 LMDLVCKSCGELMDDAVKKNMRIRVLTSDTSKLPERVLESIRKTEEETRDCTGFLFNICLSYGARQEIANACREIATEVERGTTSLDAINEMTVERHLSTAGLPDPDVLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPEVTKNDIMEMFEDYQQRERRFGR 163
            LM+L  +   E++ +A+K+++R+RVL SD  KLP  ++E+I + E +T++C+ F  N+C+SYGAR EI  ACR+IATEV RG TS++ INE  V + + TAGLPDPD+LIRTSGE R+SNFLLFQ+AY+EL F+DK+WPEVTK+D+  +  ++ +R+RRFG+
Sbjct:  188 LMNLFSQFMHEIVPEALKRDVRVRVLVSDGRKLPAYIVEAIEEIETKTQNCSKFSLNLCVSYGARDEIVGACRKIATEVVRGETSVEDINEDLVSQRMLTAGLPDPDILIRTSGELRISNFLLFQIAYSELIFMDKMWPEVTKDDVEGIIMEFNRRKRRFGK 349

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BLAST of mRNA_H-elongata_contig7957.15609.1 vs. uniprot
Match: A0A3F2S158_9STRA (Alkyl transferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S158_9STRA)

HSP 1 Score: 182 bits (462), Expect = 7.280e-55
Identity = 84/162 (51.85%), Postives = 124/162 (76.54%), Query Frame = 0

Query:    2 LMDLVCKSCGELMDDAVKKNMRIRVLTSDTSKLPERVLESIRKTEEETRDCTGFLFNICLSYGARQEIANACREIATEVERGTTSLDAINEMTVERHLSTAGLPDPDVLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPEVTKNDIMEMFEDYQQRERRFGR 163
            LM +V     +++ DAV +++R+RVL SD SKLP+ ++ESI+  E +T+ CT F  N+C+SYGAR EI  AC+++AT V +G T +D I+E  + +H+ TAGLPDPD+++RTSGE R+SNFLLFQ+AY EL F+DK WPEVT++D+ ++  ++ +R+RRFGR
Sbjct:   91 LMKMVDGFIHDILGDAVARDIRVRVLASDRSKLPDFLVESIKVVEAKTQSCTSFNLNLCVSYGARDEIVGACKKVATAVCQGDTKIDDIDEDLLSKHMLTAGLPDPDIMVRTSGELRISNFLLFQIAYAELIFLDKFWPEVTRDDLNDIIVEFNRRKRRFGR 252

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BLAST of mRNA_H-elongata_contig7957.15609.1 vs. uniprot
Match: A0A836CC83_9STRA (Alkyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC83_9STRA)

HSP 1 Score: 179 bits (454), Expect = 4.820e-54
Identity = 85/163 (52.15%), Postives = 116/163 (71.17%), Query Frame = 0

Query:    1 MLMDLVCKSCGELMDDAVKKNMRIRVLTSDTSKLPERVLESIRKTEEETRDCTGFLFNICLSYGARQEIANACREIATEVERGTTSLDAINEMTVERHLSTAGLPDPDVLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPEVTKNDIMEMFEDYQQRERRFGR 163
            +LMD +C+ C     DAV +N+RIR L +   +LP  VLE++   E +T  CTG + NICLSYG R+E+A ACR IA +V+ G  +  +I+E  +   L T  + DPDVLIRTSGE+RVSNFLLFQ+AYTELFF++K WPEVT++D+  +F+ Y+ R RR+GR
Sbjct:   60 LLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSAVFDQYRARRRRYGR 222

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BLAST of mRNA_H-elongata_contig7957.15609.1 vs. uniprot
Match: A0A833SM03_PHYIN (Alkyl transferase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SM03_PHYIN)

HSP 1 Score: 182 bits (463), Expect = 7.550e-54
Identity = 85/162 (52.47%), Postives = 126/162 (77.78%), Query Frame = 0

Query:    2 LMDLVCKSCGELMDDAVKKNMRIRVLTSDTSKLPERVLESIRKTEEETRDCTGFLFNICLSYGARQEIANACREIATEVERGTTSLDAINEMTVERHLSTAGLPDPDVLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPEVTKNDIMEMFEDYQQRERRFGR 163
            LM+L  +   E++ +A+K+++R+RVL SD  KLP  ++E+I++ E +T+ C+ F  N+C+SYGAR EI   CR+IATEV +G  S++ INE  + + + TAGLPDPD+LIRTSGE R+SNFLLFQ+AYTEL F+DK+WPEVTK+D+ ++  ++ +R+RRFG+
Sbjct:  188 LMNLFNQFMHEIVPEALKRDVRVRVLVSDGRKLPAYIVEAIKEIETKTQACSRFSLNLCVSYGARDEIVGVCRKIATEVAKGEVSVEDINEDLLSQRMLTAGLPDPDILIRTSGELRISNFLLFQIAYTELIFMDKMWPEVTKDDVQDIIIEFNRRKRRFGK 349

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BLAST of mRNA_H-elongata_contig7957.15609.1 vs. uniprot
Match: H3HD49_PHYRM (Alkyl transferase n=4 Tax=Phytophthora TaxID=4783 RepID=H3HD49_PHYRM)

HSP 1 Score: 179 bits (455), Expect = 8.330e-54
Identity = 84/162 (51.85%), Postives = 123/162 (75.93%), Query Frame = 0

Query:    2 LMDLVCKSCGELMDDAVKKNMRIRVLTSDTSKLPERVLESIRKTEEETRDCTGFLFNICLSYGARQEIANACREIATEVERGTTSLDAINEMTVERHLSTAGLPDPDVLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPEVTKNDIMEMFEDYQQRERRFGR 163
            LM LV     +++ +A+ +N+R+RVL SD+SKLP  +++SI++ E +T+ C  F  N+C+SYGAR EI  AC++IA EV  G TS+D I+E  + + + TAGLPDPD+L+RTSGE R+SNFLLFQ+AY EL F+DKLWPEVT+ D+ ++  ++ +R+RRFG+
Sbjct:   91 LMKLVDGFIHDILGEALTRNIRVRVLASDSSKLPAFLVKSIKEVETKTQHCNAFHLNLCVSYGARDEIVGACKKIAAEVAGGETSIDDIDEELLSQRMLTAGLPDPDILLRTSGELRISNFLLFQIAYAELIFMDKLWPEVTREDLQDIIVEFNRRKRRFGK 252

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BLAST of mRNA_H-elongata_contig7957.15609.1 vs. uniprot
Match: H3GUB2_PHYRM (Alkyl transferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GUB2_PHYRM)

HSP 1 Score: 181 bits (460), Expect = 1.870e-53
Identity = 85/162 (52.47%), Postives = 124/162 (76.54%), Query Frame = 0

Query:    2 LMDLVCKSCGELMDDAVKKNMRIRVLTSDTSKLPERVLESIRKTEEETRDCTGFLFNICLSYGARQEIANACREIATEVERGTTSLDAINEMTVERHLSTAGLPDPDVLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPEVTKNDIMEMFEDYQQRERRFGR 163
            LM+L  +   E++ +A+K+++R+RVL SD  KLP  ++++I   E +T  CT F  N+C+SYGAR EI  ACR+IATEV  G T+++ INE  + R + TAGLPDPD+LIRTSGE R+SNFLLFQ+AY+EL F+DK+WPEVT++D+ ++  ++ +R+RRFG+
Sbjct:  183 LMNLFNQFMHEIVPEALKRDVRVRVLVSDGRKLPAYIVQAIEDIETKTHHCTKFSLNLCVSYGARDEIVGACRKIATEVANGETTVEEINEDLLSRRMLTAGLPDPDILIRTSGELRISNFLLFQIAYSELIFLDKMWPEVTQDDVQDIVFEFNRRKRRFGK 344

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig7957.15609.1 vs. uniprot

BLAST of mRNA_H-elongata_contig7957.15609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JEJ2_9PHAE	9.110e-82	75.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LMG7_ECTSI	1.520e-65	74.05	Alkyl transferase n=1 Tax=Ectocarpus siliculosus T...	[more]
A0A0W8CW88_PHYNI	1.560e-55	53.70	Alkyl transferase n=1 Tax=Phytophthora nicotianae ...	[more]
A0A3R7NKM6_9STRA	2.520e-55	54.94	Alkyl transferase n=3 Tax=Phytophthora kernoviae T...	[more]
W2PTH8_PHYPN	4.760e-55	54.32	Alkyl transferase n=10 Tax=Phytophthora TaxID=4783...	[more]
A0A3F2S158_9STRA	7.280e-55	51.85	Alkyl transferase n=3 Tax=Phytophthora kernoviae T...	[more]
A0A836CC83_9STRA	4.820e-54	52.15	Alkyl transferase n=1 Tax=Tribonema minus TaxID=30...	[more]
A0A833SM03_PHYIN	7.550e-54	52.47	Alkyl transferase n=1 Tax=Phytophthora infestans T...	[more]
H3HD49_PHYRM	8.330e-54	51.85	Alkyl transferase n=4 Tax=Phytophthora TaxID=4783 ...	[more]
H3GUB2_PHYRM	1.870e-53	52.47	Alkyl transferase n=1 Tax=Phytophthora ramorum Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036424	Decaprenyl diphosphate synthase-like superfamily	GENE3D	3.40.1180.10		coord: 1..163 e-value: 4.0E-56 score: 191.8
IPR036424	Decaprenyl diphosphate synthase-like superfamily	SUPERFAMILY	64005	Undecaprenyl diphosphate synthase	coord: 1..158
IPR001441	Decaprenyl diphosphate synthase-like	TIGRFAM	TIGR00055	TIGR00055	coord: 2..162 e-value: 5.5E-48 score: 161.3
IPR001441	Decaprenyl diphosphate synthase-like	PFAM	PF01255	Prenyltransf	coord: 2..162 e-value: 1.5E-46 score: 158.7
IPR001441	Decaprenyl diphosphate synthase-like	PANTHER	PTHR10291	DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER	coord: 2..163
None	No IPR available	PANTHER	PTHR10291:SF0	DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE 2	coord: 2..163

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig7957	contig	H-elongata_contig7957:5000..8343 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig7957.15609.1	mRNA_H-elongata_contig7957.15609.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig7957 3810..8768 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig7957.15609.1 ID=prot_H-elongata_contig7957.15609.1|Name=mRNA_H-elongata_contig7957.15609.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
MLMDLVCKSCGELMDDAVKKNMRIRVLTSDTSKLPERVLESIRKTEEETR
DCTGFLFNICLSYGARQEIANACREIATEVERGTTSLDAINEMTVERHLS
TAGLPDPDVLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPEVTKNDIMEM
FEDYQQRERRFGR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036424	UPP_synth-like_sf
IPR001441	UPP_synth-like