prot_H-elongata_contig79193.15580.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79193.15580.1
Unique Nameprot_H-elongata_contig79193.15580.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length153
Homology
BLAST of mRNA_H-elongata_contig79193.15580.1 vs. uniprot
Match: D8LCV6_ECTSI (Alanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCV6_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 2.470e-73
Identity = 125/141 (88.65%), Postives = 134/141 (95.04%), Query Frame = 0
Query:    9 AFRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQEILEAPPGFFQKMVPVVVSTFGEAYPELREKEAFVMEIIKDEEEAFSSMLERGIKHFKEVEAEQREKSSGVIPGATAFFLYDSMGFPVDLTQVMAEEV 149
            A+RVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQ++L+APPGFFQK+VPVVV+ FG+ YPELREKEAFVMEIIK+EEEAFSSMLERGIKHFKEVE EQR KSS  IPG TAFFLYDSMGFP+DLTQVMAEEV
Sbjct:  441 AYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFVMEIIKEEEEAFSSMLERGIKHFKEVEEEQRGKSSNTIPGDTAFFLYDSMGFPLDLTQVMAEEV 581          
BLAST of mRNA_H-elongata_contig79193.15580.1 vs. uniprot
Match: A0A7S1H736_HEMAN (Alanine--tRNA ligase (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H736_HEMAN)

HSP 1 Score: 187 bits (476), Expect = 4.730e-56
Identity = 91/140 (65.00%), Postives = 114/140 (81.43%), Query Frame = 0
Query:    9 AFRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQEILEAPPGFFQKMVPVVVSTFGEAYPELREKEAFVMEIIKDEEEAFSSMLERGIKHFKEVEAEQREKSSGVIPGATAFFLYDSMGFPVDLTQVMAEE 148
            A+RV+ADHAR L+FAITDGAVP+N+GRGYVLRRILRRAVRYGQ++L APPGFF  +VPVVV  F EA+PEL  ++ FVME + +EEE+F  ML  GIK+F E+  + + +   V+ G +AF+LYD+MGFPVDLTQVMAEE
Sbjct:  100 AYRVIADHARTLTFAITDGAVPSNEGRGYVLRRILRRAVRYGQQMLGAPPGFFTSLVPVVVDVFKEAFPELEGRKDFVMETLAEEEESFEKMLTSGIKYFNELSDDMKGRKETVVSGESAFYLYDTMGFPVDLTQVMAEE 239          
BLAST of mRNA_H-elongata_contig79193.15580.1 vs. uniprot
Match: A0A1E7FNH4_9STRA (Alanine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNH4_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.240e-54
Identity = 94/145 (64.83%), Postives = 119/145 (82.07%), Query Frame = 0
Query:    4 TVYRCAFRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQEILEAPPGFFQKMVPVVVSTFGEAYPELREKEAFVMEIIKDEEEAFSSMLERGIKHFKEVEAEQREKSSGVIPGATAFFLYDSMGFPVDLTQVMAEE 148
            T+   A+RV+ADH R LSFAI DGAVP+N+GRGYVLRRILRRA RYGQ+IL+A PGFFQK++PVVV TFGEAYPEL + +A + EII +EE AFS+ML+RGIK F ++E E + +    + G TAF+LYD++GFPVDLT++MAEE
Sbjct:  347 TLKDTAYRVIADHIRTLSFAIADGAVPSNEGRGYVLRRILRRATRYGQQILQAEPGFFQKLIPVVVKTFGEAYPELVKNQATITEIIAEEETAFSTMLDRGIKFFGDLEEEMKSEGKKEVSGETAFYLYDTLGFPVDLTELMAEE 491          
BLAST of mRNA_H-elongata_contig79193.15580.1 vs. uniprot
Match: A0A7S1YSQ0_9STRA (Alanine--tRNA ligase n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YSQ0_9STRA)

HSP 1 Score: 193 bits (490), Expect = 3.310e-54
Identity = 93/145 (64.14%), Postives = 120/145 (82.76%), Query Frame = 0
Query:    4 TVYRCAFRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQEILEAPPGFFQKMVPVVVSTFGEAYPELREKEAFVMEIIKDEEEAFSSMLERGIKHFKEVEAEQREKSSGVIPGATAFFLYDSMGFPVDLTQVMAEE 148
            T+   A+R +ADHARALSFA+ DGAVP N+GRGYVLRRILRRA RYGQ+IL+A PGFF  ++PVVV TFGEAYPEL + +  ++EI+K+EEEAFS+ML+RGIK F E+E+E +E+    + G  AFFLYD++GFP+DLT++MAEE
Sbjct:  368 TLRDTAYRAIADHARALSFALADGAVPNNEGRGYVLRRILRRATRYGQQILKAEPGFFATLIPVVVDTFGEAYPELVKNQDTILEIVKEEEEAFSTMLDRGIKFFTELESELKEEGKKQVTGDKAFFLYDTLGFPIDLTELMAEE 512          
BLAST of mRNA_H-elongata_contig79193.15580.1 vs. uniprot
Match: A0A835ZLN6_9STRA (Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLN6_9STRA)

HSP 1 Score: 192 bits (489), Expect = 3.970e-54
Identity = 96/140 (68.57%), Postives = 117/140 (83.57%), Query Frame = 0
Query:    9 AFRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQEILEAPPGFFQKMVPVVVSTFGEAYPELREKEAFVMEIIKDEEEAFSSMLERGIKHFKEVEAEQREKSSGVIPGATAFFLYDSMGFPVDLTQVMAEE 148
            A+RVVADHAR L+FA+ DGAVP+N+GRGYVLRRILRRAVRYGQ+IL AP GFFQ++VPVVV +F  A+PEL+ +EA + E++ +EE +FS MLERGIK   EV+AEQR   S +IPG  AFFLYD+MGFPVDLTQ+MA E
Sbjct:  317 AYRVVADHARTLTFALADGAVPSNEGRGYVLRRILRRAVRYGQQILGAPEGFFQELVPVVVRSFSAAFPELKGQEAAIRELVTEEEASFSKMLERGIKFLGEVQAEQRASGSRLIPGDKAFFLYDTMGFPVDLTQLMAAE 456          
BLAST of mRNA_H-elongata_contig79193.15580.1 vs. uniprot
Match: A0A448Z8F1_9STRA (Alanine--tRNA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8F1_9STRA)

HSP 1 Score: 191 bits (484), Expect = 6.240e-54
Identity = 93/145 (64.14%), Postives = 116/145 (80.00%), Query Frame = 0
Query:    4 TVYRCAFRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQEILEAPPGFFQKMVPVVVSTFGEAYPELREKEAFVMEIIKDEEEAFSSMLERGIKHFKEVEAEQREKSSGVIPGATAFFLYDSMGFPVDLTQVMAEE 148
            T+   A+R +ADH R LSFAI DGAVP N+GRGYVLRRILRRA RYGQ+IL+A PGFFQK++PVVV TFGEAYPEL + +A + EII +EE AFS+ML+RGIK F E+E E +      +PG  AF+LYD++GFP+DLT++MAEE
Sbjct:  111 TLKDTAYRAIADHIRTLSFAIADGAVPNNEGRGYVLRRILRRATRYGQQILKAEPGFFQKLIPVVVETFGEAYPELVKNQATITEIIAEEEAAFSTMLDRGIKFFGELEEELKADGKSEVPGKKAFYLYDTLGFPIDLTELMAEE 255          
BLAST of mRNA_H-elongata_contig79193.15580.1 vs. uniprot
Match: A0A7S3XMY7_HETAK (Alanine--tRNA ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMY7_HETAK)

HSP 1 Score: 191 bits (484), Expect = 1.100e-53
Identity = 91/141 (64.54%), Postives = 119/141 (84.40%), Query Frame = 0
Query:    9 AFRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQEILEAPPGFFQKMVPVVVSTFGEAYPELREKEAFVMEIIKDEEEAFSSMLERGIKHFKEVEAEQREKSSGVIPGATAFFLYDSMGFPVDLTQVMAEEV 149
            A+RV+ADH R LSFAI DGAVP+N+GRGYVLRR+LRRAVR+GQ++L A  GFFQ++VP V + FG+A+PELRE++A V  +IK+EE+AFS++LERG+K+FKE+EAE +      +PG  AFFLYD++GFPVDLT +MAEEV
Sbjct:  356 AYRVLADHVRTLSFAIADGAVPSNEGRGYVLRRVLRRAVRFGQQLLGAERGFFQRLVPAVAAAFGDAFPELREQQAKVEAVIKEEEDAFSALLERGVKYFKEMEAELKAAGEARVPGDRAFFLYDTLGFPVDLTALMAEEV 496          
BLAST of mRNA_H-elongata_contig79193.15580.1 vs. uniprot
Match: K0SS72_THAOC (Alanine--tRNA ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SS72_THAOC)

HSP 1 Score: 189 bits (480), Expect = 2.160e-53
Identity = 91/145 (62.76%), Postives = 120/145 (82.76%), Query Frame = 0
Query:    4 TVYRCAFRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQEILEAPPGFFQKMVPVVVSTFGEAYPELREKEAFVMEIIKDEEEAFSSMLERGIKHFKEVEAEQREKSSGVIPGATAFFLYDSMGFPVDLTQVMAEE 148
            T+   A+R VADHAR L+FA+ DGAVP N+GRGYVLRRILRRA RYGQ+IL+  PGFF K+VPVVV T+G+AYPEL++ +A ++EI+K+EEEAFS+ML+RGIK+F+E   E  +  S ++ G  AFFLYD++GFP+DLT++MAEE
Sbjct:  111 TLKDTAYRAVADHARTLTFALADGAVPDNEGRGYVLRRILRRATRYGQQILKCEPGFFAKLVPVVVETYGDAYPELKQNQANIIEIVKEEEEAFSTMLDRGIKYFEE---EINDSKSKIVSGGQAFFLYDTLGFPIDLTELMAEE 252          
BLAST of mRNA_H-elongata_contig79193.15580.1 vs. uniprot
Match: A0A7S0YZC8_9CRYP (Alanine--tRNA ligase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YZC8_9CRYP)

HSP 1 Score: 187 bits (475), Expect = 2.490e-52
Identity = 91/140 (65.00%), Postives = 113/140 (80.71%), Query Frame = 0
Query:    9 AFRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQEILEAPPGFFQKMVPVVVSTFGEAYPELREKEAFVMEIIKDEEEAFSSMLERGIKHFKEVEAEQREKSSGVIPGATAFFLYDSMGFPVDLTQVMAEE 148
            A+RV+ADHAR L+FAITDGAVP+N+GRGYVLRRILRRAVRYGQ++L APPGFF  +VPVVV  F +A+PEL  ++ FVME + +EEE+F  ML  GIK+F E+  +   K   V+ G +AF+LYD+MGFPVDLTQVMAEE
Sbjct:  309 AYRVIADHARTLTFAITDGAVPSNEGRGYVLRRILRRAVRYGQQMLGAPPGFFTSLVPVVVEAFKDAFPELEGRQDFVMETLAEEEESFEKMLTGGIKYFNELAEDMARKEDKVVSGESAFYLYDTMGFPVDLTQVMAEE 448          
BLAST of mRNA_H-elongata_contig79193.15580.1 vs. uniprot
Match: A0A7S2BHH8_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BHH8_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.660e-51
Identity = 89/141 (63.12%), Postives = 114/141 (80.85%), Query Frame = 0
Query:    9 AFRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQEILEAPPGFFQKMVPVVVSTFGEAYPELREKEAFVMEIIKDEEEAFSSMLERGIKHFKEVEAEQREKSSG-VIPGATAFFLYDSMGFPVDLTQVMAEE 148
            A+RV+ADH R L FAI D A P+N+GRGYVLRRILRRAVRYGQ++L A PGFF  +VPV VSTF + YPEL EKEA ++EII DEE+AFS+M+ RG++HF ++ A+   +S G ++ G  AFF+YDS+GFP+DLTQ+MAEE
Sbjct:  344 AYRVIADHLRTLCFAIADDARPSNEGRGYVLRRILRRAVRYGQQLLGAKPGFFANLVPVTVSTFSDFYPELAEKEALIVEIITDEEQAFSTMVSRGVRHFTQLVADMEGRSEGKLVSGEDAFFMYDSLGFPLDLTQLMAEE 484          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79193.15580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCV6_ECTSI2.470e-7388.65Alanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S1H736_HEMAN4.730e-5665.00Alanine--tRNA ligase (Fragment) n=1 Tax=Hemiselmis... [more]
A0A1E7FNH4_9STRA2.240e-5464.83Alanine--tRNA ligase n=1 Tax=Fragilariopsis cylind... [more]
A0A7S1YSQ0_9STRA3.310e-5464.14Alanine--tRNA ligase n=4 Tax=Ditylum brightwellii ... [more]
A0A835ZLN6_9STRA3.970e-5468.57Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A448Z8F1_9STRA6.240e-5464.14Alanine--tRNA ligase n=1 Tax=Pseudo-nitzschia mult... [more]
A0A7S3XMY7_HETAK1.100e-5364.54Alanine--tRNA ligase (Fragment) n=1 Tax=Heterosigm... [more]
K0SS72_THAOC2.160e-5362.76Alanine--tRNA ligase n=1 Tax=Thalassiosira oceanic... [more]
A0A7S0YZC8_9CRYP2.490e-5265.00Alanine--tRNA ligase (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S2BHH8_9STRA1.660e-5163.12Alanine--tRNA ligase (Fragment) n=1 Tax=Dictyocha ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002318Alanine-tRNA ligase, class IIcPRINTSPR00980TRNASYNTHALAcoord: 11..27
score: 57.24
coord: 35..48
score: 76.1
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminalPFAMPF01411tRNA-synt_2ccoord: 8..148
e-value: 5.4E-51
score: 173.7
NoneNo IPR availablePANTHERPTHR11777ALANYL-TRNA SYNTHETASEcoord: 8..148
IPR018165Alanyl-tRNA synthetase, class IIc, core domainPROSITEPS50860AA_TRNA_LIGASE_II_ALAcoord: 9..148
score: 24.86
IPR018162Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamilySUPERFAMILY101353Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)coord: 7..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79193contigH-elongata_contig79193:558..2475 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79193.15580.1mRNA_H-elongata_contig79193.15580.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79193 558..2475 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79193.15580.1 ID=prot_H-elongata_contig79193.15580.1|Name=mRNA_H-elongata_contig79193.15580.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp
MLYTVYRCAFRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYG
QEILEAPPGFFQKMVPVVVSTFGEAYPELREKEAFVMEIIKDEEEAFSSM
LERGIKHFKEVEAEQREKSSGVIPGATAFFLYDSMGFPVDLTQVMAEEVR
EC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002318Ala-tRNA-lgiase_IIc
IPR018164Ala-tRNA-synth_IIc_N
IPR018165Ala-tRNA-synth_IIc_core
IPR018162Ala-tRNA-ligase_IIc_anticod-bd