prot_H-elongata_contig79128.15568.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig79128.15568.1
Unique Nameprot_H-elongata_contig79128.15568.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length123
Homology
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: D7FQS4_ECTSI (Peroxisomal membrane protein 70 abcd3, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS4_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 5.310e-57
Identity = 98/123 (79.67%), Postives = 108/123 (87.80%), Query Frame = 0
Query:    1 RQAHRGGVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 123
            ++A   GV+D  LLS+L SV+LGY+L+RE   GWDAVRDWS+VLSGGEKQRLALSRLFYHRPQFAILDE TSAVSVDVEGDIYR AA SGITLFTVSHRKSLW+HH +LLRFDGLGGY FK M
Sbjct:  585 QEAASKGVTDVDLLSVLDSVRLGYVLDREG--GWDAVRDWSDVLSGGEKQRLALSRLFYHRPQFAILDECTSAVSVDVEGDIYRLAASSGITLFTVSHRKSLWKHHGYLLRFDGLGGYEFKAM 705          
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: A0A4P9ZPW7_9FUNG (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZPW7_9FUNG)

HSP 1 Score: 157 bits (398), Expect = 3.400e-47
Identity = 77/117 (65.81%), Postives = 98/117 (83.76%), Query Frame = 0
Query:    7 GVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 123
            G++D+ L++IL+ V L YL+ RE   GW+++RDW++VLSGGEKQR+A++RLFYHRPQFAILDE TSAVSVDVEG +Y  A R GITLFTVSHR SL+++H+ LLRFDG GGY F P+
Sbjct:   32 GLTDDDLVNILKVVHLEYLVGREG--GWNSIRDWADVLSGGEKQRVAMARLFYHRPQFAILDECTSAVSVDVEGIMYNHAKRVGITLFTVSHRTSLFKYHDFLLRFDGEGGYSFDPL 146          
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: UPI0009A3418A (ATP-binding cassette sub-family D member 3 n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3418A)

HSP 1 Score: 161 bits (408), Expect = 6.750e-47
Identity = 76/117 (64.96%), Postives = 92/117 (78.63%), Query Frame = 0
Query:    7 GVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 123
            G+SD+ L   L +V+LG++LERE   GWD ++DW +VLSGGEKQR+A++RLFYH+PQFAILDE TSAVSVDVEG IY    + GITLFTVSHRKSLW HH + L  DG G Y FKP+
Sbjct:  171 GISDQVLKEYLDNVQLGHILEREG--GWDCIQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWTHHEYYLHMDGRGNYEFKPI 285          
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: U6DM48_NEOVI (ATP-binding cassette, sub-family D (ALD), member 3 (Fragment) n=1 Tax=Neovison vison TaxID=452646 RepID=U6DM48_NEOVI)

HSP 1 Score: 159 bits (403), Expect = 2.130e-46
Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = 0
Query:    5 RGGVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 123
            R G+SD  L   L +V+LG++LERE   GWD+V+DW +VLSGGEKQR+A++RLFYH+PQFAILDE TSAVSVDVEG IY    + GITLFTVSHRKSLW+HH + L  DG G Y FK +
Sbjct:  147 RKGISDLVLKEYLDNVQLGHILEREG--GWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMDGRGNYEFKQI 263          
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: A0A822GLU9_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822GLU9_9NEOB)

HSP 1 Score: 161 bits (408), Expect = 2.540e-46
Identity = 77/119 (64.71%), Postives = 94/119 (78.99%), Query Frame = 0
Query:    5 RGGVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 123
            R G+SD+ L   L +V+LG +L+RE   GWD+V+DW +VLSGGEKQR+A++RLFYH+PQFAILDE TSAVSVDVEG IY    + GITLFTVSHRKSLW+HH + L  DG G Y FKP+
Sbjct:  222 RRGISDKVLKEYLDNVQLGQILDREG--GWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMDGRGNYDFKPI 338          
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: UPI001885737E (ATP-binding cassette sub-family D member 3-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001885737E)

HSP 1 Score: 167 bits (423), Expect = 3.520e-46
Identity = 80/117 (68.38%), Postives = 95/117 (81.20%), Query Frame = 0
Query:    7 GVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 123
            G SD+ LL +L+ V+LGY+   ERE GWDAV DWS+VLSGGEKQR+A++RLFYHRPQFAILDE TSAVSVDVEG +YR+    GITLFTVSHRKSLW HH + L+ DG G + FKP+
Sbjct:  557 GRSDDWLLQLLEEVQLGYI--HERESGWDAVADWSDVLSGGEKQRVAMARLFYHRPQFAILDECTSAVSVDVEGSMYRYCREQGITLFTVSHRKSLWVHHEYYLQMDGRGAFVFKPI 671          
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: UPI001304165B (ATP-binding cassette sub-family D member 3-like n=1 Tax=Nomia melanderi TaxID=2448451 RepID=UPI001304165B)

HSP 1 Score: 155 bits (392), Expect = 5.310e-46
Identity = 73/124 (58.87%), Postives = 94/124 (75.81%), Query Frame = 0
Query:    5 RGGVSDEALLSILQSVKLGYLLERERE-----KGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 123
            RG ++D  L  +L  V+LG+LL+RE       +GWD V DW +VLSGGEKQR+A++RLFYH+PQFAILDE TSAVSVDVE  +Y +  +  ITLFTVSHR++LW+HH + L+ DG GGY FKP+
Sbjct:   39 RGKMTDHDLKYLLDLVQLGHLLDREGSANVVGQGWDVVADWMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEDSMYSYCRQENITLFTVSHRRTLWKHHEYFLQMDGRGGYEFKPI 162          
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: A0A182KFX8_9DIPT (ABC transporter domain-containing protein n=1 Tax=Anopheles christyi TaxID=43041 RepID=A0A182KFX8_9DIPT)

HSP 1 Score: 153 bits (387), Expect = 8.090e-46
Identity = 76/119 (63.87%), Postives = 91/119 (76.47%), Query Frame = 0
Query:    5 RGGVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 123
            R G +D  LL  L  V+L YL  + REKG DA+ DW +VLSGGEKQR+A++RLFYH PQFAILDE TSAVSVDVEG +Y++    GITLFTVSHRKSLW HH++ L+FDG G Y F P+
Sbjct:    3 RRGKTDADLLKYLDLVQLTYL--QVREKGLDAIEDWIDVLSGGEKQRIAMARLFYHNPQFAILDECTSAVSVDVEGSMYQYCRAVGITLFTVSHRKSLWTHHDYYLKFDGHGAYEFGPI 119          
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: A0A1X7UZA4_AMPQE (ABC transporter domain-containing protein n=3 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UZA4_AMPQE)

HSP 1 Score: 162 bits (410), Expect = 9.270e-46
Identity = 78/117 (66.67%), Postives = 93/117 (79.49%), Query Frame = 0
Query:    7 GVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 123
            G+SD+ L   L  V+L YLLERER  GWDA +DW +VLSGGEKQR+A++RLFYH+PQFAILDE TSAVSVDVEG IY      GITLFTVSHRKSLW+HH ++++FDG G Y FK +
Sbjct:  316 GISDQVLEEYLTKVQLKYLLERER--GWDAFQDWMDVLSGGEKQRMAMARLFYHQPQFAILDECTSAVSVDVEGYIYTHCREKGITLFTVSHRKSLWQHHEYVMQFDGRGAYEFKRI 430          
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Match: A0A6I9YZN1_9SAUR (ATP-binding cassette sub-family D member 3-like n=1 Tax=Thamnophis sirtalis TaxID=35019 RepID=A0A6I9YZN1_9SAUR)

HSP 1 Score: 159 bits (403), Expect = 1.090e-45
Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = 0
Query:    5 RGGVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQRLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRKSLWRHHNHLLRFDGLGGYHFKPM 123
            R G+SD+ L   L +V+LG +LERE   GWD+V+DW +VLSGGEKQR+A++RLFYH+PQFAILDE TSAVSVDVEG IY    + GITLFTVSHRKSLW+HH+  L  DG G Y FK +
Sbjct:  211 RKGISDQVLKEYLDNVQLGQILEREG--GWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWKHHDFYLHMDGRGNYEFKKI 327          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79128.15568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQS4_ECTSI5.310e-5779.67Peroxisomal membrane protein 70 abcd3, putative n=... [more]
A0A4P9ZPW7_9FUNG3.400e-4765.81P-loop containing nucleoside triphosphate hydrolas... [more]
UPI0009A3418A6.750e-4764.96ATP-binding cassette sub-family D member 3 n=1 Tax... [more]
U6DM48_NEOVI2.130e-4664.71ATP-binding cassette, sub-family D (ALD), member 3... [more]
A0A822GLU9_9NEOB2.540e-4664.71(mimic poison frog) hypothetical protein n=1 Tax=R... [more]
UPI001885737E3.520e-4668.38ATP-binding cassette sub-family D member 3-like n=... [more]
UPI001304165B5.310e-4658.87ATP-binding cassette sub-family D member 3-like n=... [more]
A0A182KFX8_9DIPT8.090e-4663.87ABC transporter domain-containing protein n=1 Tax=... [more]
A0A1X7UZA4_AMPQE9.270e-4666.67ABC transporter domain-containing protein n=3 Tax=... [more]
A0A6I9YZN1_9SAUR1.090e-4564.71ATP-binding cassette sub-family D member 3-like n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 34..72
e-value: 1.2E-6
score: 29.0
NoneNo IPR availableGENE3D3.40.50.300coord: 2..117
e-value: 1.2E-16
score: 62.9
NoneNo IPR availablePANTHERPTHR11384ATP-BINDING CASSETTE, SUB-FAMILY D MEMBERcoord: 3..123
IPR031241ATP-binding cassette sub-family D member 3PANTHERPTHR11384:SF34ATP-BINDING CASSETTE SUB-FAMILY D MEMBER 3coord: 3..123
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79128contigH-elongata_contig79128:1307..2506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79128.15568.1mRNA_H-elongata_contig79128.15568.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig79128 1307..2506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig79128.15568.1 ID=prot_H-elongata_contig79128.15568.1|Name=mRNA_H-elongata_contig79128.15568.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
RQAHRGGVSDEALLSILQSVKLGYLLEREREKGWDAVRDWSEVLSGGEKQ
RLALSRLFYHRPQFAILDESTSAVSVDVEGDIYRFAARSGITLFTVSHRK
SLWRHHNHLLRFDGLGGYHFKPM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR031241ABCD3
IPR027417P-loop_NTPase