prot_H-elongata_contig78775.15546.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78775.15546.1
Unique Nameprot_H-elongata_contig78775.15546.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig78775.15546.1 vs. uniprot
Match: A0A6H5KYR4_9PHAE (V-type proton ATPase subunit a n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYR4_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 3.990e-42
Identity = 70/77 (90.91%), Postives = 74/77 (96.10%), Query Frame = 0
Query:    1 MAKWFRSEDMAYVSIIVNEDAAHTCIFDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLSFFGDEVRHESV 77
            MA+WFRSEDMAYVSIIVNEDAAHTCI DLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKL+FFG+EVR  +V
Sbjct:    1 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEEVRFSTV 77          
BLAST of mRNA_H-elongata_contig78775.15546.1 vs. uniprot
Match: D7FPY6_ECTSI (V-type proton ATPase subunit a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY6_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 1.480e-37
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0
Query:    1 MAKWFRSEDMAYVSIIVNEDAAHTCIFDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLSFFGDEVR 73
            MA+WFRSEDMAYVSIIVNEDAAHTCI DLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKL+FFG+EV+
Sbjct:   84 MARWFRSEDMAYVSIIVNEDAAHTCISDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLAFFGEEVK 156          
BLAST of mRNA_H-elongata_contig78775.15546.1 vs. uniprot
Match: A0A6U2Q738_9STRA (V-type proton ATPase subunit a (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2Q738_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.550e-33
Identity = 55/71 (77.46%), Postives = 65/71 (91.55%), Query Frame = 0
Query:    1 MAKWFRSEDMAYVSIIVNEDAAHTCIFDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLSFFGDE 71
            MAKWFRSE+M YVS+IVNEDAAH C+ DLGKLG++QFTDLNP+LT FQRRYV+Y+KR DELERKL +FG+E
Sbjct:    1 MAKWFRSEEMEYVSLIVNEDAAHQCLSDLGKLGVLQFTDLNPDLTPFQRRYVSYVKRCDELERKLRYFGNE 71          
BLAST of mRNA_H-elongata_contig78775.15546.1 vs. uniprot
Match: A0A7S4JK70_9STRA (V-type proton ATPase subunit a (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JK70_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.750e-32
Identity = 52/69 (75.36%), Postives = 62/69 (89.86%), Query Frame = 0
Query:    1 MAKWFRSEDMAYVSIIVNEDAAHTCIFDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLSFFG 69
            MA+WFRSE+M Y+S+IVNEDAAH C+ DLG+LG+IQFTDLNP+LT FQRRYV+Y+KR DELERKL FF 
Sbjct:    1 MARWFRSEEMEYISLIVNEDAAHDCLADLGRLGVIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRFFA 69          
BLAST of mRNA_H-elongata_contig78775.15546.1 vs. uniprot
Match: A0A835ZAQ4_9STRA (V-type proton ATPase subunit a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ4_9STRA)

HSP 1 Score: 126 bits (316), Expect = 5.060e-32
Identity = 57/72 (79.17%), Postives = 66/72 (91.67%), Query Frame = 0
Query:    1 MAKWFRSEDMAYVSIIVNEDAAHTCIFDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLSFFGDEV 72
            MA WFRSEDM YVS+I+NEDAAH+CI DLGKLG++QFTDLNPELT FQRRYV +IKRIDELERK+ FFG+E+
Sbjct:    1 MASWFRSEDMTYVSLIMNEDAAHSCISDLGKLGVVQFTDLNPELTPFQRRYVNFIKRIDELERKIKFFGEEI 72          
BLAST of mRNA_H-elongata_contig78775.15546.1 vs. uniprot
Match: K0RXJ3_THAOC (V-type proton ATPase subunit a n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXJ3_THAOC)

HSP 1 Score: 117 bits (292), Expect = 2.030e-31
Identity = 53/71 (74.65%), Postives = 61/71 (85.92%), Query Frame = 0
Query:    1 MAKWFRSEDMAYVSIIVNEDAAHTCIFDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLSFFGDE 71
            MA+WFRSE M Y+S+IVNEDAAH C+ DLGKL  IQFTDLNP+LT FQRRYV+Y++R DELERKL FFG E
Sbjct:    1 MARWFRSEHMEYISLIVNEDAAHDCLADLGKLSAIQFTDLNPDLTPFQRRYVSYVRRCDELERKLRFFGSE 71          
BLAST of mRNA_H-elongata_contig78775.15546.1 vs. uniprot
Match: A0A7S1BU79_9STRA (V-type proton ATPase subunit a (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BU79_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.860e-30
Identity = 55/71 (77.46%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 MAKWFRSEDMAYVSIIVNEDAAHTCIFDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLSFFGDE 71
            MA+WFRSE M Y+S+IVNEDAAH C+ DLG+LGMIQFTDLNP+LT FQRRYV+Y+KR DELERKL FFG E
Sbjct:    1 MARWFRSEPMEYISLIVNEDAAHDCLSDLGQLGMIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRFFGSE 71          
BLAST of mRNA_H-elongata_contig78775.15546.1 vs. uniprot
Match: A0A7S2IB47_9STRA (V-type proton ATPase subunit a (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IB47_9STRA)

HSP 1 Score: 114 bits (286), Expect = 5.880e-30
Identity = 52/71 (73.24%), Postives = 61/71 (85.92%), Query Frame = 0
Query:    1 MAKWFRSEDMAYVSIIVNEDAAHTCIFDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLSFFGDE 71
            M++WFRSE M Y+S+IVN DAAH C+ DLGKLG+IQFTDLNPELT FQRRYV+Y+KR DELERKL +F  E
Sbjct:   28 MSRWFRSEPMEYISLIVNGDAAHDCLSDLGKLGVIQFTDLNPELTPFQRRYVSYVKRCDELERKLRYFSTE 98          
BLAST of mRNA_H-elongata_contig78775.15546.1 vs. uniprot
Match: B7G3I2_PHATC (V-type proton ATPase subunit a n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3I2_PHATC)

HSP 1 Score: 119 bits (298), Expect = 1.350e-29
Identity = 53/72 (73.61%), Postives = 64/72 (88.89%), Query Frame = 0
Query:    1 MAKWFRSEDMAYVSIIVNEDAAHTCIFDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLSFFGDEV 72
            MA+WFRSE M Y+S+IVNEDAAH C+ DLGKLG+IQFTDLNP+LT FQRRYV+Y+KR DELERKL +F +E+
Sbjct:    1 MARWFRSEPMEYISLIVNEDAAHDCLADLGKLGVIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRYFSNEI 72          
BLAST of mRNA_H-elongata_contig78775.15546.1 vs. uniprot
Match: A0A4D9CU34_9STRA (V-type proton ATPase subunit a n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU34_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.610e-29
Identity = 52/72 (72.22%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    1 MAKWFRSEDMAYVSIIVNEDAAHTCIFDLGKLGMIQFTDLNPELTAFQRRYVAYIKRIDELERKLSFFGDEV 72
            MAKWFRSE+M YVS+IVNEDAAH  + DLG LG+IQFTDLN E TAFQRRY++YIKR DELERKL +   E+
Sbjct:    1 MAKWFRSEEMEYVSLIVNEDAAHGAVNDLGMLGIIQFTDLNHEQTAFQRRYISYIKRCDELERKLRYMRTEI 72          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78775.15546.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYR4_9PHAE3.990e-4290.91V-type proton ATPase subunit a n=1 Tax=Ectocarpus ... [more]
D7FPY6_ECTSI1.480e-3793.15V-type proton ATPase subunit a n=1 Tax=Ectocarpus ... [more]
A0A6U2Q738_9STRA1.550e-3377.46V-type proton ATPase subunit a (Fragment) n=1 Tax=... [more]
A0A7S4JK70_9STRA1.750e-3275.36V-type proton ATPase subunit a (Fragment) n=1 Tax=... [more]
A0A835ZAQ4_9STRA5.060e-3279.17V-type proton ATPase subunit a n=1 Tax=Tribonema m... [more]
K0RXJ3_THAOC2.030e-3174.65V-type proton ATPase subunit a n=1 Tax=Thalassiosi... [more]
A0A7S1BU79_9STRA2.860e-3077.46V-type proton ATPase subunit a (Fragment) n=1 Tax=... [more]
A0A7S2IB47_9STRA5.880e-3073.24V-type proton ATPase subunit a (Fragment) n=1 Tax=... [more]
B7G3I2_PHATC1.350e-2973.61V-type proton ATPase subunit a n=3 Tax=Phaeodactyl... [more]
A0A4D9CU34_9STRA2.610e-2972.22V-type proton ATPase subunit a n=1 Tax=Nannochloro... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
IPR002490V-type ATPase, V0 complex, 116kDa subunit familyPFAMPF01496V_ATPase_Icoord: 28..74
e-value: 5.1E-14
score: 51.2
IPR002490V-type ATPase, V0 complex, 116kDa subunit familyPANTHERPTHR11629VACUOLAR PROTON ATPASEScoord: 5..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78775contigH-elongata_contig78775:1858..2088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78775.15546.1mRNA_H-elongata_contig78775.15546.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78775 1541..2088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78775.15546.1 ID=prot_H-elongata_contig78775.15546.1|Name=mRNA_H-elongata_contig78775.15546.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
MAKWFRSEDMAYVSIIVNEDAAHTCIFDLGKLGMIQFTDLNPELTAFQRR
YVAYIKRIDELERKLSFFGDEVRHESV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002490V-ATPase_116kDa_su