prot_H-elongata_contig7858.15528.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7858.15528.1
Unique Nameprot_H-elongata_contig7858.15528.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length380
Homology
BLAST of mRNA_H-elongata_contig7858.15528.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.290e-29
Identity = 159/386 (41.19%), Postives = 202/386 (52.33%), Query Frame = 0
Query:    1 RGLLRGVEQIIVDLVFERLSPKHLAAWLEVPLVQAAACGDRELVARLMAAGADTGCAMHVAIRGGYENLVSDMLTHEPLLSIKDKDGATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSFLCRYGPRELSPLDVAXXXXXXXXXRTMIVQGVDVQASDSIDSTALHEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAS---TGSPEA-VXXXXXXXXXXXXXXXXXXXXXXXXXSNAGKAGVVKIVDTLLRWGADEAAADVDGLIPKDVVGANCPH--RVERDVERVFKLLENAPADRAWRRRGFFVMCRSLLRTVHVENLSRGLEGNSGDSSSSVVAWTLGL-HEGVFRTVMLFL 379
            RG LRG E+ I DL  E  +PK  A  ++  L  AA  G   L  +L+ AGA+ G A+H A+RGG+ ++   +L      S  D++G TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +    RYG RE+S LD+          RT+I  G DV A++     ALH A                                A+   T +  A +                         + AGK G+V++VD LLRWGADE     +G+   D +G   P   R+  + E V KLL NAPADRAWRRR   V+CR+    + +          S D  + + A  LGL  EG+FRT++ F+
Sbjct:    7 RGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQL----------SSDRIARLEARVLGLVEEGIFRTIVRFI 382          
BLAST of mRNA_H-elongata_contig7858.15528.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 2.220e-20
Identity = 197/400 (49.25%), Postives = 241/400 (60.25%), Query Frame = 0
Query:   11 IVDLVFERLSPKHLAAWLEVPLVQAAACGDRELVARLMAAGADTGCAMHVAIRGGYENLVSDMLTHEPLLSIKDKDGATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSFLCRYGPRELSPLDVAXXXXXXXXXRTMIVQGVDVQASDSIDSTALHEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASTGSPEAVXXXXXXXXXXXXXXXXXXXXXXXXXSN-AGKAGVVKIVDTLLRWGADEAAADVDGLIPKDVVGANCPH--RVERDVERVFKLLENAPADRAWRRRGFFVMCRS---------LLRTVHVENLSR------------GLEGNS------GDSSSSVVAWTLGLHE-GVFRTVMLFL 379
            +VD +FE L+ + LA  L   L  AAA G+++L  RL+ AGA+ G A+H A+ GG+  +VSD+L  E  L+  D DG TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      R    +      A         R +I  G DV A D+   TA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXX              AG+ G  ++V++LLR GADE  A+V G    D++G +     R+  DVERV +LL NAPADRAWRRRG+ +MCR+         +    H  N++R            G+ G S      G + + VV+  + L E G+FRT++ +L
Sbjct:    1 MVDFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400          
BLAST of mRNA_H-elongata_contig7858.15528.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 9.000e-14
Identity = 54/151 (35.76%), Postives = 75/151 (49.67%), Query Frame = 0
Query:  262 NAGKAGVVKIVDTLLRWGADEAAADVDGLIPKDVVGANCPHRVER--DVERVFKLLENAPADRAWRRRGFFVMCR-------------------------SLLRTVHVENLSRG------LEGNSGDSSSSVVAWTLGLHEGVFRTVMLFL 379
            +AG  G V++VD LLRW ADE   D  G  P ++VG   P       +V+RV+KLL+ AP DRAWRRRG  V+CR                         S  + V  E ++ G       +G +    S++V   LGL EG+FRT++ +L
Sbjct:  249 SAGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGLDEGIFRTIVGYL 399          
BLAST of mRNA_H-elongata_contig7858.15528.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 3.690e-13
Identity = 46/79 (58.23%), Postives = 53/79 (67.09%), Query Frame = 0
Query:  263 AGKAGVVKIVDTLLRWGADEAAADVDGLIPKDVVG-----ANCPHRVERDVERVFKLLENAPADRAWRRRGFFVMCRSL 336
            AG+ GV  IVD LLR GADE A + DG    +VVG     A CP   ++DVERV  LLENAP DRAWRRRGF V+CR+ 
Sbjct:  216 AGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLN-KQDVERVRDLLENAPVDRAWRRRGFLVLCRAF 293          
BLAST of mRNA_H-elongata_contig7858.15528.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.760e-12
Identity = 45/79 (56.96%), Postives = 53/79 (67.09%), Query Frame = 0
Query:  263 AGKAGVVKIVDTLLRWGADEAAADVDGLIPKDVVG-----ANCPHRVERDVERVFKLLENAPADRAWRRRGFFVMCRSL 336
            AG+ GV  IVD LLR GADE A + DG    +VVG     A CP   ++D+ERV  LLENAPADRAWRRRG  V+CR+ 
Sbjct:  265 AGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLN-KQDLERVRDLLENAPADRAWRRRGLLVLCRAF 342          
BLAST of mRNA_H-elongata_contig7858.15528.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 2.630e-12
Identity = 187/418 (44.74%), Postives = 223/418 (53.35%), Query Frame = 0
Query:    1 RGLLRGVEQIIVDLVFERLSPKHLAAWLEVPLVQAAACGDRELVARLMAAGADTGCAMHVAIRGGYENLVSDMLTHEPLLSIKDKDGATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSFLCR--YGPRELSPLDVAXXXXXXXXXRTMIVQGVDVQASDSIDSTALHEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASTGSP--EAVXXXXXXXXXXXXXXXXXXXXXXXXXSNAGKAGVVKIVDTLLRWGADEAAADVDGLIPKDVVGANCPHRVE----RDVERVFKLLENAPADRAWRRRGFFVMCRSLLRTVHVEN---------LSRGL---------------------EGNSGDSSSSVVAWTLGLHE-GVFRTVMLFL 379
            R  LRG    ++DLV    +P+  AAWL+VPL  A   GDR+L + L+  GA+ G A++ AI  G   ++S +L +   +S  D +G   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      R  Y     S     XXXXXXXXX         V A D++   ALH A                                AS   P  E+  XXXXXXXXXXXXXXXXXXXXXX  S AG+ G  ++VD LLR GADE   D +G  P D VG +C    +     +V  V +LL NAPADRAWRRRG  V+CR+ LR   +           LSR                       EG +GD   S     + L E G+FR+V+ FL
Sbjct:    6 RKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVG-HCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422          
BLAST of mRNA_H-elongata_contig7858.15528.1 vs. uniprot
Match: A0A6H5JBC2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC2_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 3.770e-10
Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 0
Query:  262 NAGKAGVVKIVDTLLRWGADEAAADVDGLIPKDVVGANCPH--RVERDVERVFKLLENAPADRAWRRRGFFVMCRSLLRTVHVENLSRG 348
            +AG  G V++VD LLRW ADEA  D  G  P+++V    P   R+  +V+RV+K L+ AP DRAWR RG  V+CR     VH E L  G
Sbjct:  461 SAGDEGAVEVVDLLLRWNADEADDDTYGRTPRNLVVRMAPETDRMFVNVQRVWKPLQYAPQDRAWRHRGMLVLCR-----VHPERLVYG 544          
BLAST of mRNA_H-elongata_contig7858.15528.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 4.560e-9
Identity = 39/85 (45.88%), Postives = 48/85 (56.47%), Query Frame = 0
Query:  267 GVVKIVDTLLRWGADEAAADVDGLIPKDVVGANCPHRVERDVERV--FKLLENAPADRAWRRRGFFVMCRSLLRTVHVENLSRGL 349
            GV+++VD LLRWGA E A +  G  P +V      HR +   ER     LL  APADRAWRRRG+ VM R+   T  +    RGL
Sbjct:  286 GVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRARSETERIAAQRRGL 370          
BLAST of mRNA_H-elongata_contig7858.15528.1 vs. uniprot
Match: D8LKW6_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW6_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 1.070e-7
Identity = 48/125 (38.40%), Postives = 63/125 (50.40%), Query Frame = 0
Query:  273 DTLLRWGADEAAADVDGLIPKD-VVGANCPHRVERDVERVFKLLENAPADRAWRRRGFFVMCRSLLRTVHVENLSRGLEG-----------NSGDSSS------SVVAWTLGLHEGVFRTVMLFL 379
            D LLRWGADE A D +G  PK  +VG++   +  R       +L+ AP DRAWRRRG  +MCR+L   V   +  RG                GDS S       ++A  + L + VFRTV+ FL
Sbjct:  378 DLLLRWGADETAIDNEGYTPKARIVGSSNGSQALRH------MLDKAPVDRAWRRRGTLIMCRALPGIVSTTS-RRGXXXXXXXXXXXXXXRGGDSVSRRRGLGGLLARVVELDDAVFRTVVGFL 495          
BLAST of mRNA_H-elongata_contig7858.15528.1 vs. uniprot
Match: D7G316_ECTSI (Inversin protein alternative isoform n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G316_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 1.320e-7
Identity = 49/129 (37.98%), Postives = 61/129 (47.29%), Query Frame = 0
Query:  269 VKIVDTLLRWGADEAAADVDGLIPKDVVGANCPHRVERDVERVFKLLENAPADRAWRRRGFFVMCRS------------------LLRTVHVENLSRGLEGNSGDSSSSVVAWTLGLHEGVFRTVMLFL 379
            V+ V  LL+WGADE A D DG  P D++  + P       E V  LL  APADRAWRRRG+ VM  S                    R+V  +  +RG  G       + VA    + EGVFR V+ FL
Sbjct:  585 VEHVSLLLQWGADETALDRDGKTPADLIDESRPQH-----EAVRLLLARAPADRAWRRRGWLVMVFSRTPKAGGSXXXXXXXXXXXARSVKQQCGARG--GKESFDLFAAVAQLRVVEEGVFRNVVGFL 706          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7858.15528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKL4_ECTSI1.290e-2941.19Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5KXK5_9PHAE2.220e-2049.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G981_ECTSI9.000e-1435.76Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7G6X8_ECTSI3.690e-1358.23Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNU3_9PHAE1.760e-1256.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYD0_ECTSI2.630e-1244.74Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5JBC2_9PHAE3.770e-1047.19Reverse transcriptase domain-containing protein n=... [more]
D7FSI6_ECTSI4.560e-945.88Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LKW6_ECTSI1.070e-738.40Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G316_ECTSI1.320e-737.98Inversin protein alternative isoform n=1 Tax=Ectoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 234..248
score: 42.1
coord: 120..135
score: 45.74
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 86..115
e-value: 0.0042
score: 26.3
coord: 186..215
e-value: 0.064
score: 22.4
coord: 251..284
e-value: 430.0
score: 7.7
coord: 219..247
e-value: 0.13
score: 21.4
coord: 119..148
e-value: 0.0022
score: 27.3
coord: 27..56
e-value: 1200.0
score: 4.3
coord: 153..182
e-value: 2.6
score: 17.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 119..145
score: 11.354
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 86..118
score: 12.983
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 153..185
score: 10.553
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 186..218
score: 11.915
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 6..328
e-value: 9.1E-65
score: 220.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 31..281
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 161..247
e-value: 6.9E-12
score: 45.8
coord: 83..145
e-value: 5.6E-12
score: 46.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 53..292
score: 56.981
NoneNo IPR availablePANTHERPTHR24126FAMILY NOT NAMEDcoord: 30..171
coord: 125..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7858contigH-elongata_contig7858:8335..9474 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7858.15528.1mRNA_H-elongata_contig7858.15528.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7858 8335..9474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7858.15528.1 ID=prot_H-elongata_contig7858.15528.1|Name=mRNA_H-elongata_contig7858.15528.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=380bp
RGLLRGVEQIIVDLVFERLSPKHLAAWLEVPLVQAAACGDRELVARLMAA
GADTGCAMHVAIRGGYENLVSDMLTHEPLLSIKDKDGATPIHIAAAFGHR
SMIRSLLGKGSHKNALDRWGRTPLHRAAENGHSDAVRDLLEAGSSFLCRY
GPRELSPLDVAARRGHVEALRTMIVQGVDVQASDSIDSTALHEAAAENMV
ESINILLEAGADLSAQDSFEWTPLHRASTGSPEAVTALLEHGADVNLPGA
FAQTPLYLAASNAGKAGVVKIVDTLLRWGADEAAADVDGLIPKDVVGANC
PHRVERDVERVFKLLENAPADRAWRRRGFFVMCRSLLRTVHVENLSRGLE
GNSGDSSSSVVAWTLGLHEGVFRTVMLFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom