prot_H-elongata_contig78575.15527.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78575.15527.1
Unique Nameprot_H-elongata_contig78575.15527.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length313
Homology
BLAST of mRNA_H-elongata_contig78575.15527.1 vs. uniprot
Match: A0A6H5K843_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K843_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 1.120e-95
Identity = 184/342 (53.80%), Postives = 218/342 (63.74%), Query Frame = 0
Query:    1 SVLNQLPTTVLANTYLSAKLQSPSNRADLEDRRMTRGASSPRSNPVSLLNPSENLDMIVEHTLQELGMHTLRVTVQFEFAGAPEGSEARSMRKFYRFSVMNPVEMSSFCASIKGSPLVELQLRNTTQMDLLLESCEFLPEKGVLASVLGGG------VRAFSDKPNARTSQSRSATRRSAAAEQRE----GLDVSASRAMEALENPRKIRWWKSGCGNEDGE----GKGIEGVLSPVDRA---TAVERFDGRVLLCPDESYQLMYAIKASAESGV---GR-------GSAVPSCRDAV---FEEGTHTLGQIELRWLTTMGESGSVRSAPVIFEAPDRREVE 312
            SVLN + TTVL N  LSAKLQSP+ R DLEDRR  RGAS  R NP  LL+PSENLDMIVEHTL+ELG HTLRVTV++  AG PEGSE RSMRKFYRFSVMNPV ++  C +++GSP VE+QL NTTQMDLLLESC F+PE GV AS+LGGG        +  D+ N  T  +     R     + E    G+  SA+    A    R   WW+ G GN  G     G G EG   P D     TAVERFDGRVLL P+E +QLMY+++   E+     GR       G A  +  DA    F EG+HTLG++E+ W TT GESGS+R  PV+FEAPDR EVE
Sbjct:   79 SVLNHMSTTVLVNASLSAKLQSPTGRVDLEDRRTARGASVSRPNPAPLLSPSENLDMIVEHTLEELGTHTLRVTVKYHVAGDPEGSEPRSMRKFYRFSVMNPVSVNPVCTAVRGSPFVEVQLVNTTQMDLLLESCHFIPEGGVEASLLGGGEGGDPLAASPWDEGNENTDTASDGGARPPLQGEGEAGCEGVRTSAATTKGAWRRDRC--WWRGGGGNGRGPSLGGGAGEEGKSPPHDDRCLLTAVERFDGRVLLRPEEGHQLMYSVRPREETTSPPPGREGSLGAVGGAARAGGDAGEGGFGEGSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVE 418          
BLAST of mRNA_H-elongata_contig78575.15527.1 vs. uniprot
Match: D8LQ16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ16_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 1.360e-91
Identity = 176/343 (51.31%), Postives = 211/343 (61.52%), Query Frame = 0
Query:    1 SVLNQLPTTVLANTYLSAKLQSPSNRADLEDRRMTRGASSPRSNPVSLLNPSENLDMIVEHTLQELGMHTLRVTVQFEFAGAPEGSEARSMRKFYRFSVMNPVEMSSFCASIKGSPLVELQLRNTTQMDLLLESCEFLPEKGVLASVLGGG------VRAFSDKPNARTSQSRSATRRSAAAEQRE----GLDVSASRAMEALENPRKIRWWKSGCGNEDGEGKGI----EGVLSPVDRA---TAVERFDGRVLLCPDESYQLMYAIKASAESGV-------------GRGSAVPSCRDAVFEEGTHTLGQIELRWLTTMGESGSVRSAPVIFEAPDRREVEV 313
            SVLN + TTVL N  LSAKLQSP+ R DLEDRR  RGAS  R NP  LL+PSENLDMIVEHTL+ELG HTLRVTV++  AG PEGSE RSMRKFYRFSVMNPV ++  C +++GSP VE+QL NTTQMDLLLESC F+PE GV AS+LGGG        +  D+ N     +R    R     + E    G+  S +    A    R+ RWW+ G               EG   P D     TAVERFDGRVLL P+E +QLMY+++   E+               G   A     +  F EG+HTLG++E+ W TT GESGS+R  PV+FEAPDR EVEV
Sbjct:   79 SVLNHMSTTVLVNASLSAKLQSPTGRVDLEDRRTARGASVSRPNPAPLLSPSENLDMIVEHTLEELGTHTLRVTVKYHVAGDPEGSEPRSMRKFYRFSVMNPVSVNPVCTAVRGSPFVEVQLVNTTQMDLLLESCHFIPEGGVEASLLGGGEGGDPLAASPWDEDNETADTARDGGARPPLQGEGEAESGGVRTSTATTKGAR---RRDRWWRGGXXXXXXXXXXXXXXAEGKAPPHDDRCLLTAVERFDGRVLLRPEEGHQLMYSVRPKEETTPPPPGKEGYLDAVRGDARAGGDAGEGGFGEGSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVEV 418          
BLAST of mRNA_H-elongata_contig78575.15527.1 vs. uniprot
Match: A0A835ZFD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFD5_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.690e-59
Identity = 132/315 (41.90%), Postives = 165/315 (52.38%), Query Frame = 0
Query:    1 SVLNQLPTTVLANTYLSAKLQSPSNRADLEDRRMTRGASSPRSNPVSLLNPSENLDMIVEHTLQELGMHTLRVTVQFEFAGAPEGSEARSMRKFYRFSVMNPVEMSSFCASIKGSPLVELQLRNTTQMDLLLESCEFLPE--KGVLASVLGGGVRAFSDKPNARTSQSRSATRRSAAAEQREGLDVSASRAMEALENPRKIRWWKSGCGNEDGEGKGIEGVLSPVDRATAVERFDGRVLLCPDESYQLMYAIKASAESGVGRGSAVPSCRDAVFEEGTHTLGQIELRWLTTMGESGSVRSAPVIFEAPDRREVEV 313
            SVLN + T  L +  +SAKLQ+PS R DL DRR  RG   P  NP  LL   ++LDMIVEHTL ELG HTLRV V +  A  P G EA+S+RKFYRF+V+NP+ MSS C  ++G PLVE+ +RNTTQMDLLLES +F+PE   G  A ++G                                       A+ A + P                        S VD  +A+E FD R+LL PDE++Q +Y +    E G GR              GTHTLG IEL W TTMGESGSV S P++ +   +  VEV
Sbjct:  113 SVLNSVDTP-LVDVDMSAKLQTPSAREDLADRRQDRGGGPPPQNPAPLLLNGQHLDMIVEHTLHELGTHTLRVAVTYRDALTPLGQEAKSLRKFYRFNVLNPINMSSTCLLVRGVPLVEVSIRNTTQMDLLLESYDFIPEVDSGYAAELIGKNA------------------------------------AVGANDTPASP-----------------PSSQSDVDGVSALECFDSRILLAPDETHQFVYRVTKGGELG-GR-----------LSRGTHTLGHIELSWRTTMGESGSVLSGPLVCDVQGKEGVEV 361          
BLAST of mRNA_H-elongata_contig78575.15527.1 vs. uniprot
Match: A0A485LRM5_9STRA (Aste57867_24862 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRM5_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.560e-24
Identity = 63/139 (45.32%), Postives = 90/139 (64.75%), Query Frame = 0
Query:    1 SVLNQLPTTVLANTYLSAKLQSPSNRADLEDRRMTRGASSPRSNPVSLLNPSENLDMIVEHTLQELGMHTLRVTVQFEFAGAPEGSEARSMRKFYRFSVMNPVEMSSFCASIKGSPLVELQLRNTTQMDLLLESCEFLP 139
            SV+NQ     L    L+AKLQ+P+ R+DL DRR+ RG ++P +NP ++L+   NLDM VE+ L E+G+HTLRV V +     P  SEA+S+RKFYRF V+NP  ++     IK    VE +++N TQ  L +E+  F+P
Sbjct:   44 SVINQFSCD-LHQVGLTAKLQTPTTRSDLSDRRLARGGTTPPTNPAAVLSAGSNLDMAVEYELNEIGVHTLRVGVSYL---DPITSEAKSLRKFYRFQVLNPFTITFKHVLIKDESYVEAKIQNITQTPLHVETIAFVP 178          
BLAST of mRNA_H-elongata_contig78575.15527.1 vs. uniprot
Match: A0A067BMW3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BMW3_SAPPC)

HSP 1 Score: 107 bits (267), Expect = 6.430e-23
Identity = 64/138 (46.38%), Postives = 89/138 (64.49%), Query Frame = 0
Query:    1 SVLNQLPTTVLANTYLSAKLQSPSNRADLEDRRMTRGASSPRSNPVSLLNPSENLDMIVEHTLQELGMHTLRVTVQFEFAGAPEGSEARSMRKFYRFSVMNPVEMSSFCASIKGSPLVELQLRNTTQMDLLLESCEFL 138
            SV+NQ     L    L+AKLQ+P+NR+DL D R++RG SSP  NP+ LL    NLDM VE+ L E+G+HTLRV V +     P   EA+S+RKFYRF+V+NP+ ++     I+    VE +++N TQ  L +E+  FL
Sbjct:   59 SVINQFACD-LQQVGLTAKLQTPTNRSDLADTRVSRGGSSPPPNPMPLLPSGGNLDMAVEYELNEVGVHTLRVGVSYL---DPITLEAKSLRKFYRFNVLNPLTITFKHLLIQEESFVEAKIQNITQAPLHVETVHFL 192          
BLAST of mRNA_H-elongata_contig78575.15527.1 vs. uniprot
Match: A0A6G0WM05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM05_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.320e-22
Identity = 61/139 (43.88%), Postives = 88/139 (63.31%), Query Frame = 0
Query:    1 SVLNQLPTTVLANTYLSAKLQSPSNRADLEDRRMTRGASSPRSNPVSLLNPSENLDMIVEHTLQELGMHTLRVTVQFEFAGAPEGSEARSMRKFYRFSVMNPVEMSSFCASIKGSPLVELQLRNTTQMDLLLESCEFLP 139
            SV+NQ     L    L+AKLQ+P++R+DL D+R +RG ++P  NP   L+   NLDM VE+ L E+G+HTLRV V +     P  SE +S+RKFYRF V+NP+ ++     IK    VE ++ N TQ  L +++ EF+P
Sbjct:   58 SVINQFACD-LHQVGLTAKLQTPTSRSDLLDKRSSRGGATPPMNPTPTLSAGSNLDMAVEYELNEVGVHTLRVGVTYL---DPLTSEPKSLRKFYRFQVLNPLTITFKHVLIKEESYVEAKIHNITQTPLHIDTIEFVP 192          
BLAST of mRNA_H-elongata_contig78575.15527.1 vs. uniprot
Match: A0A1V9ZS54_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZS54_9STRA)

HSP 1 Score: 107 bits (266), Expect = 5.040e-22
Identity = 63/138 (45.65%), Postives = 88/138 (63.77%), Query Frame = 0
Query:    1 SVLNQLPTTVLANTYLSAKLQSPSNRADLEDRRMTRGASSPRSNPVSLLNPSENLDMIVEHTLQELGMHTLRVTVQFEFAGAPEGSEARSMRKFYRFSVMNPVEMSSFCASIKGSPLVELQLRNTTQMDLLLESCEFL 138
            SV+NQ     L    L+AKLQ+P+ R+DL D R +RG S P  NP+ +L+ S NLDM VE+ L E+G+HTLRV V +     P  SE +S+RKFYRF+V+NP+ ++     IK    VE +++N TQ  L +E+  FL
Sbjct:   59 SVINQFSCN-LQQVGLTAKLQTPTTRSDLIDTRASRGGSMPPPNPIPVLSSSTNLDMAVEYELNEVGVHTLRVGVSYL---DPITSEPKSLRKFYRFNVLNPLTITFKHLLIKDESFVESKIQNITQAPLHIETVHFL 192          
BLAST of mRNA_H-elongata_contig78575.15527.1 vs. uniprot
Match: A0A024TLV2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TLV2_9STRA)

HSP 1 Score: 104 bits (260), Expect = 5.770e-22
Identity = 61/139 (43.88%), Postives = 87/139 (62.59%), Query Frame = 0
Query:    1 SVLNQLPTTVLANTYLSAKLQSPSNRADLEDRRMTRGASSPRSNPVSLLNPSENLDMIVEHTLQELGMHTLRVTVQFEFAGAPEGSEARSMRKFYRFSVMNPVEMSSFCASIKGSPLVELQLRNTTQMDLLLESCEFLP 139
            SV+NQ     L    L+AKLQ+P+ R+DL D+R+ RG ++P  NP+ +L    NLDM VE  L E+G+HTLRV V +     P  SE +S+RKFYRF V+NP+ ++     I+    VE +++N TQ+ L  +S  FLP
Sbjct:   58 SVINQFACD-LNQVGLTAKLQTPTTRSDLSDKRLLRGGTTPPMNPMPVLPAGSNLDMAVEFELNEVGVHTLRVGVSYV---DPVTSEPKSLRKFYRFQVLNPLTITLKHVLIQDESFVEAKVQNITQIPLHADSILFLP 192          
BLAST of mRNA_H-elongata_contig78575.15527.1 vs. uniprot
Match: A0A1V9YJP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJP5_9STRA)

HSP 1 Score: 104 bits (259), Expect = 8.560e-22
Identity = 62/138 (44.93%), Postives = 89/138 (64.49%), Query Frame = 0
Query:    1 SVLNQLPTTVLANTYLSAKLQSPSNRADLEDRRMTRGASSPRSNPVSLLNPSENLDMIVEHTLQELGMHTLRVTVQFEFAGAPEGSEARSMRKFYRFSVMNPVEMSSFCASIKGSPLVELQLRNTTQMDLLLESCEFL 138
            SV+NQ     L    L+AKLQ+P+ R+DL D R++RG S+P  NP+ +L    NLDM VE+ L E+G+HTLRV V +     P   EA+S+RKFYRF+V+NP+ ++     I+    VE +++N TQ  LL+E+  FL
Sbjct:   59 SVINQFACE-LQQVGLTAKLQTPTTRSDLVDTRVSRGGSTPPPNPMPVLLSGGNLDMAVEYELNEVGVHTLRVGVSYL---DPVTLEAKSLRKFYRFNVLNPLTITFKHLLIQDESYVEAKIQNITQGPLLVETVHFL 192          
BLAST of mRNA_H-elongata_contig78575.15527.1 vs. uniprot
Match: W4FDK6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDK6_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.740e-20
Identity = 58/139 (41.73%), Postives = 87/139 (62.59%), Query Frame = 0
Query:    1 SVLNQLPTTVLANTYLSAKLQSPSNRADLEDRRMTRGASSPRSNPVSLLNPSENLDMIVEHTLQELGMHTLRVTVQFEFAGAPEGSEARSMRKFYRFSVMNPVEMSSFCASIKGSPLVELQLRNTTQMDLLLESCEFLP 139
            SV+NQ     L    L+AKLQ+P+ R+DL D+R  RG ++P  NP ++L+   NLDM VE  L E+G+HTLRV V +     P  +E +S+RKFYRF V+NP+ ++     I+    VE +++N TQ+ L  ++  F+P
Sbjct:   58 SVINQFACD-LNQVGLTAKLQTPTTRSDLTDKRELRGGTTPPVNPAAVLSAGSNLDMAVEFELSEVGVHTLRVGVSYL---DPLTNEPKSLRKFYRFQVLNPLTITFKHVLIQDISFVEAKIQNITQIPLHADTIVFVP 192          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78575.15527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K843_9PHAE1.120e-9553.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ16_ECTSI1.360e-9151.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFD5_9STRA2.690e-5941.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A485LRM5_9STRA1.560e-2445.32Aste57867_24862 protein n=1 Tax=Aphanomyces stella... [more]
A0A067BMW3_SAPPC6.430e-2346.38Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A6G0WM05_9STRA1.320e-2243.88Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9ZS54_9STRA5.040e-2245.65Cyclic nucleotide-binding domain-containing protei... [more]
A0A024TLV2_9STRA5.770e-2243.88Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1V9YJP5_9STRA8.560e-2244.93Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
W4FDK6_9STRA3.740e-2041.73Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010378Trafficking protein particle complex subunit 13PFAMPF06159DUF974coord: 1..149
e-value: 1.4E-23
score: 84.0
IPR010378Trafficking protein particle complex subunit 13PANTHERPTHR13134UNCHARACTERIZEDcoord: 10..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78575contigH-elongata_contig78575:402..2788 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78575.15527.1mRNA_H-elongata_contig78575.15527.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78575 402..2788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78575.15527.1 ID=prot_H-elongata_contig78575.15527.1|Name=mRNA_H-elongata_contig78575.15527.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=313bp
SVLNQLPTTVLANTYLSAKLQSPSNRADLEDRRMTRGASSPRSNPVSLLN
PSENLDMIVEHTLQELGMHTLRVTVQFEFAGAPEGSEARSMRKFYRFSVM
NPVEMSSFCASIKGSPLVELQLRNTTQMDLLLESCEFLPEKGVLASVLGG
GVRAFSDKPNARTSQSRSATRRSAAAEQREGLDVSASRAMEALENPRKIR
WWKSGCGNEDGEGKGIEGVLSPVDRATAVERFDGRVLLCPDESYQLMYAI
KASAESGVGRGSAVPSCRDAVFEEGTHTLGQIELRWLTTMGESGSVRSAP
VIFEAPDRREVEV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010378TRAPPC13