prot_H-elongata_contig7847.15517.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7847.15517.1
Unique Nameprot_H-elongata_contig7847.15517.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length118
Homology
BLAST of mRNA_H-elongata_contig7847.15517.1 vs. uniprot
Match: D7G6C4_ECTSI (Eukaryotic elongation factor-1 B gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6C4_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 2.630e-24
Identity = 72/104 (69.23%), Postives = 80/104 (76.92%), Query Frame = 0
Query:    1 MKLVMSPEYPKAFPCVTRWFTTCVNQPQLMAVLRNVELAKEELTAEGAPAVPKKAKKATXXXXXXXXXXXXXXXXXXXSSPRDIEEPAPENKAPNPLAILDKDV 104
            MKLV+SPEY KAFPCVTRWFTTCVNQPQ  AV+  VELAKEE+TAEGAP  P   K   XXXXXXXXXXXXXXXX      RD+  PA E KAP+PLA++DK+ 
Sbjct:  170 MKLVVSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEGAPKAP---KXXXXXXXXXXXXXXXXXXXEEDDGSRDLGMPAEEKKAPHPLAVMDKEA 270          
BLAST of mRNA_H-elongata_contig7847.15517.1 vs. uniprot
Match: A0A6H5JF10_9PHAE (GST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF10_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 7.870e-24
Identity = 73/104 (70.19%), Postives = 81/104 (77.88%), Query Frame = 0
Query:    1 MKLVMSPEYPKAFPCVTRWFTTCVNQPQLMAVLRNVELAKEELTAEGAPAVPKKAKKATXXXXXXXXXXXXXXXXXXXSSPRDIEEPAPENKAPNPLAILDKDV 104
            MKLV+SPEY KAFPCVTRWFTTCVNQPQ MAV+  VELAKEE+TAEGAP   K      XXXXXXXXXXXXXXXXX     RD+  PA E KAP+PLA++DK+ 
Sbjct:  148 MKLVVSPEYRKAFPCVTRWFTTCVNQPQFMAVIGTVELAKEEMTAEGAP---KXXXXXXXXXXXXXXXXXXXXXXXEDDGSRDLGMPAEEKKAPHPLAVMDKEA 248          
BLAST of mRNA_H-elongata_contig7847.15517.1 vs. uniprot
Match: A0A836CFW7_9STRA (Eukaryotic elongation factor-1 B gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFW7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.460e-13
Identity = 37/54 (68.52%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    1 MKLVMSPEYPKAFPCVTRWFTTCVNQPQLMAVLRNVELAKEELTAEGAPAVPKK 54
            +KLVM  EY KAFPCV RWFTTCVNQPQ +AV+  VE AKEELT  G  A P K
Sbjct:  169 VKLVMDAEYRKAFPCVMRWFTTCVNQPQFVAVVGKVEPAKEELTPAGVAAAPAK 222          
BLAST of mRNA_H-elongata_contig7847.15517.1 vs. uniprot
Match: A0A7S3XWT6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWT6_HETAK)

HSP 1 Score: 63.9 bits (154), Expect = 1.740e-9
Identity = 32/50 (64.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 MKLVMSPEYPKAFPCVTRWFTTCVNQPQLMAVLRNVELAKEELTAEGAPA 50
            MKLVM   Y   FPCV RWFTT VNQPQ  AV+  V L + ELTA GAPA
Sbjct:  170 MKLVMDAAYRADFPCVQRWFTTVVNQPQFKAVVGEVVLCETELTASGAPA 219          
BLAST of mRNA_H-elongata_contig7847.15517.1 vs. uniprot
Match: A0A7S2Y1Q3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1Q3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.990e-9
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 MKLVMSPEYPKAFPCVTRWFTTCVNQPQLMAVLRNVELAKEELTA 45
            +KLVMSP Y  AFPC+ RWFTT VNQPQ  AV+  V LA++ELTA
Sbjct:   91 LKLVMSPAYRAAFPCLIRWFTTIVNQPQFKAVVGEVVLAEQELTA 135          
BLAST of mRNA_H-elongata_contig7847.15517.1 vs. uniprot
Match: A0A7R9UIM6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UIM6_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.520e-8
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    3 LVMSPEYPKAFPCVTRWFTTCVNQPQLMAVLRNVELAKEELTAEG 47
            L+  PEY  +FPCV RWF TCVNQP+ +AV   V LA++EL A+G
Sbjct:  173 LLCGPEYRSSFPCVMRWFNTCVNQPEFVAVCGTVTLAEKELVAKG 217          
BLAST of mRNA_H-elongata_contig7847.15517.1 vs. uniprot
Match: A0A7R9UHZ1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UHZ1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 5.350e-8
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    3 LVMSPEYPKAFPCVTRWFTTCVNQPQLMAVLRNVELAKEELTAEG 47
            L+  PEY  +FPCV RWF TCVNQP+ +AV   V LA++EL A+G
Sbjct:  173 LLCGPEYRSSFPCVMRWFNTCVNQPEFVAVCGTVTLAEKELVAKG 217          
BLAST of mRNA_H-elongata_contig7847.15517.1 vs. uniprot
Match: A0A7S0PE98_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PE98_CAFRO)

HSP 1 Score: 53.1 bits (126), Expect = 7.700e-6
Identity = 25/48 (52.08%), Postives = 30/48 (62.50%), Query Frame = 0
Query:    1 MKLVMSPEYPKAFPCVTRWFTTCVNQPQLMAVLRNVELAKEELTAEGA 48
            M +V+  E   +FPCVTRWFTTCV +PQ  A L    L  E + AEGA
Sbjct:  179 MTMVLDAEARASFPCVTRWFTTCVGKPQFAARLGETTLCVERMLAEGA 226          
BLAST of mRNA_H-elongata_contig7847.15517.1 vs. uniprot
Match: A0A812XYF7_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XYF7_9DINO)

HSP 1 Score: 53.1 bits (126), Expect = 1.010e-5
Identity = 25/48 (52.08%), Postives = 30/48 (62.50%), Query Frame = 0
Query:    1 MKLVMSPEYPKAFPCVTRWFTTCVNQPQLMAVLRNVELAKEELTAEGA 48
            M +V+  E   +FPCVTRWFTTCV +PQ  A L    L  E + AEGA
Sbjct:  230 MTMVLDAEARASFPCVTRWFTTCVGKPQFAARLGETTLCVERMLAEGA 277          
BLAST of mRNA_H-elongata_contig7847.15517.1 vs. uniprot
Match: A0A5A8CRJ1_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CRJ1_CAFRO)

HSP 1 Score: 53.1 bits (126), Expect = 1.040e-5
Identity = 25/48 (52.08%), Postives = 30/48 (62.50%), Query Frame = 0
Query:    1 MKLVMSPEYPKAFPCVTRWFTTCVNQPQLMAVLRNVELAKEELTAEGA 48
            M +V+  E   +FPCVTRWFTTCV +PQ  A L    L  E + AEGA
Sbjct:  175 MTMVLDAEARASFPCVTRWFTTCVGKPQFAARLGETTLCVERMLAEGA 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7847.15517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G6C4_ECTSI2.630e-2469.23Eukaryotic elongation factor-1 B gamma n=1 Tax=Ect... [more]
A0A6H5JF10_9PHAE7.870e-2470.19GST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CFW7_9STRA1.460e-1368.52Eukaryotic elongation factor-1 B gamma n=1 Tax=Tri... [more]
A0A7S3XWT6_HETAK1.740e-964.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y1Q3_9STRA2.990e-966.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9UIM6_9STRA3.520e-857.78Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7R9UHZ1_9STRA5.350e-857.78Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0PE98_CAFRO7.700e-652.08Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A812XYF7_9DINO1.010e-552.08Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A5A8CRJ1_CAFRO1.040e-552.08Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1050.10coord: 1..46
e-value: 8.7E-8
score: 34.1
NoneNo IPR availablePANTHERPTHR43986:SF1ELONGATION FACTOR 1-GAMMAcoord: 2..101
NoneNo IPR availablePANTHERPTHR43986FAMILY NOT NAMEDcoord: 2..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7847contigH-elongata_contig7847:6072..6425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7847.15517.1mRNA_H-elongata_contig7847.15517.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7847 5904..6541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7847.15517.1 ID=prot_H-elongata_contig7847.15517.1|Name=mRNA_H-elongata_contig7847.15517.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
MKLVMSPEYPKAFPCVTRWFTTCVNQPQLMAVLRNVELAKEELTAEGAPA
VPKKAKKATASKEEKNEPKKREPKKKEESSPRDIEEPAPENKAPNPLAIL
DKDVGRRSTQTTHTRTA*
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