prot_H-elongata_contig78444.15514.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78444.15514.1
Unique Nameprot_H-elongata_contig78444.15514.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length125
Homology
BLAST of mRNA_H-elongata_contig78444.15514.1 vs. uniprot
Match: D8LGQ4_ECTSI (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGQ4_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 5.630e-62
Identity = 104/123 (84.55%), Postives = 114/123 (92.68%), Query Frame = 0
Query:    1 SALPTHSTSSTQMWYPQSLSMMPSPDDPPEVDPRRKDPDKPSDTPPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPNKDITLYINSPGGSVSSGMAIYDAIQ 123
            SAL   +  + + WYP S+SMMPSPDDPPEVDPRRKDPD+P++ PPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDP+KDITLYINSPGGSVS+GMAIYDA+Q
Sbjct:   43 SALSMKAGPNPKTWYPHSVSMMPSPDDPPEVDPRRKDPDRPAEAPPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPDKDITLYINSPGGSVSAGMAIYDAMQ 165          
BLAST of mRNA_H-elongata_contig78444.15514.1 vs. uniprot
Match: A0A835YSZ8_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ8_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.750e-52
Identity = 92/104 (88.46%), Postives = 100/104 (96.15%), Query Frame = 0
Query:   21 MMPSPDDPP-EVDPRRKDPDKPSDTPPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPNKDITLYINSPGGSVSSGMAIYDAIQ 123
            MMP+PDDPP EVDPRR+DPDKPS+ PPVRMPVVDVGG QMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLA++DP+KDITLYINSPGGSVS+GMAIYD +Q
Sbjct:   60 MMPNPDDPPPEVDPRRRDPDKPSEIPPVRMPVVDVGGGQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLASEDPSKDITLYINSPGGSVSAGMAIYDTMQ 163          
BLAST of mRNA_H-elongata_contig78444.15514.1 vs. uniprot
Match: F0YIP9_AURAN (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIP9_AURAN)

HSP 1 Score: 165 bits (418), Expect = 1.300e-48
Identity = 87/103 (84.47%), Postives = 95/103 (92.23%), Query Frame = 0
Query:   21 MMPSPDDPPEVDPRRKDPDKPSDTPPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPNKDITLYINSPGGSVSSGMAIYDAIQ 123
            MMPSPDDPPEVDPRR+DP+KPS  PPVRMP+VD G  QMDVISRLL+DRILLLG+ V+DEVANVLVAQLLYLANDDP KDITLYINSPGGSVS+GMAIYD +Q
Sbjct:   47 MMPSPDDPPEVDPRRRDPEKPS-IPPVRMPMVDTGDGQMDVISRLLRDRILLLGRGVDDEVANVLVAQLLYLANDDPTKDITLYINSPGGSVSAGMAIYDTMQ 148          
BLAST of mRNA_H-elongata_contig78444.15514.1 vs. uniprot
Match: A0A7S1D863_CYCTE (ATP-dependent Clp protease proteolytic subunit (Fragment) n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D863_CYCTE)

HSP 1 Score: 152 bits (383), Expect = 1.340e-44
Identity = 81/100 (81.00%), Postives = 87/100 (87.00%), Query Frame = 0
Query:   25 PDDP-PEVDPRRKDPDKPSDTPPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPNKDITLYINSPGGSVSSGMAIYDAIQ 123
            PDDP PEVDPRRKDPD      PVRMPV+D G  QMDVISRLLKDRILLLGQ V+DEVANVLVAQLLYLAN+DP KDIT+YINSPGGSVS+GMAIYD +Q
Sbjct:   51 PDDPQPEVDPRRKDPDDKPPPSPVRMPVIDTGDGQMDVISRLLKDRILLLGQSVDDEVANVLVAQLLYLANEDPGKDITMYINSPGGSVSAGMAIYDTMQ 150          
BLAST of mRNA_H-elongata_contig78444.15514.1 vs. uniprot
Match: A0A7S3NLA1_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLA1_9STRA)

HSP 1 Score: 154 bits (388), Expect = 3.380e-44
Identity = 86/106 (81.13%), Postives = 93/106 (87.74%), Query Frame = 0
Query:   19 LSMMPSPDDPPEVDPRRKDPD-KPSDTPPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPNKDITLYINSPGGSVSSGMAIYDAIQ 123
            + MM  P+  PEVDPRR+DPD KP   PPVRMPVVD G  QMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLAN+DP KDITLY+NSPGGSVS+GMAIYDA+Q
Sbjct:   38 IKMMSEPE--PEVDPRRRDPDTKP--VPPVRMPVVDSGDGQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANEDPTKDITLYVNSPGGSVSAGMAIYDAMQ 139          
BLAST of mRNA_H-elongata_contig78444.15514.1 vs. uniprot
Match: A0A7S2UVQ8_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVQ8_9STRA)

HSP 1 Score: 154 bits (388), Expect = 7.220e-44
Identity = 80/98 (81.63%), Postives = 88/98 (89.80%), Query Frame = 0
Query:   26 DDPPEVDPRRKDPDKPSDTPPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPNKDITLYINSPGGSVSSGMAIYDAIQ 123
            ++PPEVDPRR++PD+    PP  MPVVDVG  QMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLAN+DP KDITLYINSPGGSVS+GMAIYD +Q
Sbjct:   72 EEPPEVDPRRRNPDESPTRPPPLMPVVDVGDGQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANEDPEKDITLYINSPGGSVSAGMAIYDTMQ 169          
BLAST of mRNA_H-elongata_contig78444.15514.1 vs. uniprot
Match: A0A7R9ZQJ7_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQJ7_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.970e-43
Identity = 80/102 (78.43%), Postives = 91/102 (89.22%), Query Frame = 0
Query:   25 PDDP-PEVDPRRKDPDKPSDTPPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPNKDITLYINSPGGSVSSGMAIYDAIQVL 125
            PD+P PE+DPRRKDPD+  + PPVRMPVVD    QMDV+SRLLKDRILLLGQ V+DEVANVLVAQLLYLAN+DP+KDITLYINSPGGSVS+GMAIYD +Q +
Sbjct:   43 PDEPAPEIDPRRKDPDERPNVPPVRMPVVDTEKGQMDVVSRLLKDRILLLGQGVDDEVANVLVAQLLYLANEDPDKDITLYINSPGGSVSAGMAIYDTMQYI 144          
BLAST of mRNA_H-elongata_contig78444.15514.1 vs. uniprot
Match: A0A6T5QFA7_HETAK (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QFA7_HETAK)

HSP 1 Score: 150 bits (380), Expect = 6.690e-43
Identity = 81/110 (73.64%), Postives = 94/110 (85.45%), Query Frame = 0
Query:   14 WYPQSLSMMPSPDDPPEVDPRRKDPDKPSDTPPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPNKDITLYINSPGGSVSSGMAIYDAIQ 123
            W P+   MMP  ++PPE+DPRRK+PD+    PP  MPVVDVGG QMDVISRLL+DRILLLGQQVNDEVAN+LVAQLLYLA +DP KDITLYINSPGGSVS+G+AI+D +Q
Sbjct:   43 WSPK---MMPD-EEPPEIDPRRKNPDEAPVRPPPMMPVVDVGGGQMDVISRLLQDRILLLGQQVNDEVANLLVAQLLYLAQEDPTKDITLYINSPGGSVSAGLAIFDTMQ 148          
BLAST of mRNA_H-elongata_contig78444.15514.1 vs. uniprot
Match: K0SHF4_THAOC (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SHF4_THAOC)

HSP 1 Score: 150 bits (379), Expect = 1.390e-42
Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = 0
Query:   11 TQMWYPQSLSMMPSPDDP-PEVDPRRKDPDKPSDTPPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPNKDITLYINSPGGSVSSGMAIYDAIQ 123
            ++M YP   +MMP P DP PEVDPRRK+PD+     PVRMPVVD  GSQ DVISRLL+DRI+LLGQ V+DE+ANVLVAQLLYLAN+DP KDITLYINSPGGSVS+GMAIYD +Q
Sbjct:   54 SRMAYP---TMMPPPTDPDPEVDPRRKNPDEQPSRGPVRMPVVDSDGSQKDVISRLLQDRIILLGQGVDDEIANVLVAQLLYLANEDPTKDITLYINSPGGSVSAGMAIYDTMQ 164          
BLAST of mRNA_H-elongata_contig78444.15514.1 vs. uniprot
Match: A0A7S2R2M4_9STRA (ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2M4_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.010e-42
Identity = 77/96 (80.21%), Postives = 85/96 (88.54%), Query Frame = 0
Query:   29 PEVDPRRKDPDKPSDTPPVRMPVVDVG-GSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPNKDITLYINSPGGSVSSGMAIYDAIQ 123
            PEVDPRRK+PD      PVRMPV+D+G G QMDV+SRLLKDRILLLGQ V+DEVANVLVAQLLYLAN+DP KDITLYINSPGGSVS+GMAIYD +Q
Sbjct:   34 PEVDPRRKNPDDQPPPAPVRMPVIDLGDGKQMDVVSRLLKDRILLLGQGVDDEVANVLVAQLLYLANEDPEKDITLYINSPGGSVSAGMAIYDTMQ 129          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78444.15514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGQ4_ECTSI5.630e-6284.55ATP-dependent Clp protease proteolytic subunit n=2... [more]
A0A835YSZ8_9STRA1.750e-5288.46ATP-dependent Clp protease proteolytic subunit n=1... [more]
F0YIP9_AURAN1.300e-4884.47ATP-dependent Clp protease proteolytic subunit n=2... [more]
A0A7S1D863_CYCTE1.340e-4481.00ATP-dependent Clp protease proteolytic subunit (Fr... [more]
A0A7S3NLA1_9STRA3.380e-4481.13ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S2UVQ8_9STRA7.220e-4481.63ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7R9ZQJ7_9STRA1.970e-4378.43ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A6T5QFA7_HETAK6.690e-4373.64ATP-dependent Clp protease proteolytic subunit n=1... [more]
K0SHF4_THAOC1.390e-4273.68ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S2R2M4_9STRA2.010e-4280.21ATP-dependent Clp protease proteolytic subunit (Fr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 60..75
score: 49.84
coord: 100..120
score: 66.19
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 58..124
e-value: 1.2E-24
score: 87.2
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 44..124
NoneNo IPR availableGENE3D3.90.226.10coord: 44..125
e-value: 7.8E-26
score: 92.8
NoneNo IPR availablePANTHERPTHR10381:SF11ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT, MITOCHONDRIALcoord: 44..124
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 55..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78444contigH-elongata_contig78444:1541..2891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78444.15514.1mRNA_H-elongata_contig78444.15514.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78444 1541..2891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78444.15514.1 ID=prot_H-elongata_contig78444.15514.1|Name=mRNA_H-elongata_contig78444.15514.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
SALPTHSTSSTQMWYPQSLSMMPSPDDPPEVDPRRKDPDKPSDTPPVRMP
VVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPNKD
ITLYINSPGGSVSSGMAIYDAIQVL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR023562ClpP/TepA
IPR029045ClpP/crotonase-like_dom_sf