prot_H-elongata_contig7804.15475.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7804.15475.1
Unique Nameprot_H-elongata_contig7804.15475.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A2J7ZRN6_9CHLO (Transmembrane protein 97 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZRN6_9CHLO)

HSP 1 Score: 88.6 bits (218), Expect = 7.150e-20
Identity = 47/97 (48.45%), Postives = 62/97 (63.92%), Query Frame = 0
Query:    8 WFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFGPGA 104
            WF +L+  ETL  +PFF     GF+RR N +R+PCIIYGT  AT+++PI+ADIL   +  S  +R  L  IY P+L++PL LVL MA    PF   A
Sbjct:   62 WFVSLVTCETLLQLPFFFVVAYGFIRRANWIRVPCIIYGTHVATTMVPILADILFGPD--SGPKRLTLFWIYFPYLLVPLLLVLRMALVDKPFAAAA 156          
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A2K3E7Z2_CHLRE (EXPERA domain-containing protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E7Z2_CHLRE)

HSP 1 Score: 87.4 bits (215), Expect = 2.020e-19
Identity = 44/94 (46.81%), Postives = 59/94 (62.77%), Query Frame = 0
Query:    8 WFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFG 101
            WF +L+W ET   +PFF  A   F++R N +R+PCIIYG   AT+++PI+ DIL S    +      L +IY P+L LPLALV+ MA    PFG
Sbjct:   62 WFVSLVWCETALQLPFFFVAAYAFIKRANWIRVPCIIYGAHVATTMVPILTDILFSPA--AGSHSPALAAIYAPYLALPLALVIRMAVSAQPFG 153          
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A836BPG6_9CHLO (EXPERA domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BPG6_9CHLO)

HSP 1 Score: 84.7 bits (208), Expect = 2.310e-18
Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    8 WFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFG 101
            WF +++W ET+  +PFF  A   F+++ N +RIPCIIYG+  AT+++PI+ DIL      S   ++ L +IY+P+LI+P+ LV+ MAA   P+ 
Sbjct:   63 WFVSMVWCETVLQMPFFFVAAWAFIKKANWIRIPCIIYGSHVATTMVPILGDILFGPE--SGPNKHVLAAIYVPYLIVPVLLVIRMAAAEKPWA 154          
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A150GYU0_GONPE (EXPERA domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GYU0_GONPE)

HSP 1 Score: 84.3 bits (207), Expect = 3.190e-18
Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    8 WFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFGPGAPDPMHSKR 112
            WF +L+W E L+ +PFF  A   F++R N +R+P IIYG    T++IPI+ DIL   +  S  +R+ L +IY+P+LI+PL L++ MA    PFG         KR
Sbjct:   63 WFVSLVWGEVLYQLPFFFVASYAFIKRRNWIRVPSIIYGAHVVTTMIPILTDILFGPD--SGPKRHTLAAIYVPYLIVPLLLLVRMAVVEQPFGADDASKRGVKR 165          
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A8J4CRT1_9CHLO (EXPERA domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CRT1_9CHLO)

HSP 1 Score: 84.0 bits (206), Expect = 4.300e-18
Identity = 44/94 (46.81%), Postives = 60/94 (63.83%), Query Frame = 0
Query:    8 WFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFG 101
            WF +L+  E    +PFF FA   F++R N +R+P I+YGT  ATS++PI+ DIL S +  S  +R  L  IYLP+LI+PL LV+ M     PFG
Sbjct:   63 WFVSLVACECFIQLPFFFFATYAFIKRRNWIRMPSILYGTHVATSMVPILVDILLSPS--SGPKRVTLALIYLPYLIVPLLLVVRMVVTAQPFG 154          
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: D8UHN3_VOLCA (EXPERA domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UHN3_VOLCA)

HSP 1 Score: 83.6 bits (205), Expect = 6.360e-18
Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 0
Query:    8 WFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFGPGAPDPMHSKR 112
            WF +L+  E L  +PFF  A   F++R N +RIPCI+YG+  AT+++PI+++ L S    +  +R  LVSIYLP+L++P+ LV+ MA    PFG  A      K 
Sbjct:   63 WFVSLVACEILLQLPFFFVASYAFLKRRNWIRIPCIVYGSHVATTMVPILSEFLFSPE--AGPKRLTLVSIYLPYLVVPVLLVVRMAVVERPFGSTAAGKRSKKN 165          
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A4D9D300_9STRA (EXPERA domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D300_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 9.490e-18
Identity = 44/105 (41.90%), Postives = 68/105 (64.76%), Query Frame = 0
Query:    1 MAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFGPGAP 105
            MA P  PWF+A++  E +  +PFF  A  GF  + N +R+PCI+YG+  AT+++PI+ D  A   +LS  ++  L+ IY P+L++P+ LV+IM  +  PFG G P
Sbjct:   60 MANPP-PWFQAVVACELVMQLPFFFVAAYGFWTQQNWLRLPCIVYGSHVATTLVPIL-DAFARAPHLSLDKKMTLIGIYSPYLLVPVMLVVIMWRNERPFGMGLP 162          
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A813FG80_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FG80_POLGL)

HSP 1 Score: 81.6 bits (200), Expect = 3.900e-17
Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    1 MAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRW---NAVRIPCIIYGTEAATSVIPIIADI-LASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFG 101
            MA P   W  +L+  E L  +PFF FA A F R     NA+R+PCIIYGT   T+ IPI+A I L +E+  S+  R+KL  +Y+P+L +PL L  +M A P PF 
Sbjct:   63 MASPP-SWLRSLLAAELLLQLPFFPFAAAAFWRASPADNAMRLPCIIYGTHVVTTQIPILAAIVLDTEHVKSESHRWKLFGMYVPYLAVPLLLTAVMLARPAPFS 166          
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: A0A836BQS8_9CHLO (EXPERA domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BQS8_9CHLO)

HSP 1 Score: 79.0 bits (193), Expect = 4.050e-16
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 0
Query:    8 WFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPFG 101
            WF++LI  E  F +PFF  A   F+ + N +RIPCIIYG+  AT+V+PI+ D L      +   +Y L SI  P+L++PL LV+ MA    P+G
Sbjct:   63 WFKSLICCELTFQLPFFFIATYAFITKANWIRIPCIIYGSHVATTVVPILGDFLFGPE--AGPNKYVLASINAPFLVIPLLLVIRMAMVEQPWG 154          
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Match: C1EB28_MICCC (EXPERA domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EB28_MICCC)

HSP 1 Score: 78.6 bits (192), Expect = 5.470e-16
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    1 MAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAATSVIPIIADILASENNLSD-VQRYKLVSIYLPWLILPLALVLIMAADPTPFGP-GAPD 106
            MA P   WF++ I  E LF +PFF      F  R N +RIP ++YG   AT++IPI+A+IL       D   R+KL  IYLP+L++P ++   +  D  PFG  G P+
Sbjct:   56 MADPPT-WFKSFILFELLFQLPFFFIGFKAFYERRNWIRIPGVVYGAHTATTLIPILAEILHPATVFPDEAARWKLFLIYLPYLLVPASMAYALGVDDKPFGAKGGPN 162          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7804.15475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2J7ZRN6_9CHLO7.150e-2048.45Transmembrane protein 97 n=1 Tax=Tetrabaena social... [more]
A0A2K3E7Z2_CHLRE2.020e-1946.81EXPERA domain-containing protein n=4 Tax=Chlamydom... [more]
A0A836BPG6_9CHLO2.310e-1842.55EXPERA domain-containing protein n=1 Tax=Edaphochl... [more]
A0A150GYU0_GONPE3.190e-1841.90EXPERA domain-containing protein n=1 Tax=Gonium pe... [more]
A0A8J4CRT1_9CHLO4.300e-1846.81EXPERA domain-containing protein n=1 Tax=Volvox re... [more]
D8UHN3_VOLCA6.360e-1841.90EXPERA domain-containing protein n=1 Tax=Volvox ca... [more]
A0A4D9D300_9STRA9.490e-1841.90EXPERA domain-containing protein n=3 Tax=Monodopsi... [more]
A0A813FG80_POLGL3.900e-1745.71Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A836BQS8_9CHLO4.050e-1643.62EXPERA domain-containing protein n=1 Tax=Edaphochl... [more]
C1EB28_MICCC5.470e-1640.74EXPERA domain-containing protein n=2 Tax=Micromona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF10914DUF2781coord: 6..94
e-value: 2.4E-22
score: 79.9
NoneNo IPR availablePANTHERPTHR31204:SF1SIGMA INTRACELLULAR RECEPTOR 2coord: 3..94
NoneNo IPR availablePANTHERPTHR31204FAMILY NOT NAMEDcoord: 3..94
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..95
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 75..94
IPR033118EXPERA domainPROSITEPS51751EXPERAcoord: 1..90
score: 11.886

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7804contigH-elongata_contig7804:4751..5439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7804.15475.1mRNA_H-elongata_contig7804.15475.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7804 4715..6304 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7804.15475.1 ID=prot_H-elongata_contig7804.15475.1|Name=mRNA_H-elongata_contig7804.15475.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
MAKPTIPWFEALIWIETLFHVPFFAFAVAGFVRRWNAVRIPCIIYGTEAA
TSVIPIIADILASENNLSDVQRYKLVSIYLPWLILPLALVLIMAADPTPF
GPGAPDPMHSKRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033118EXPERA