prot_H-elongata_contig77898.15463.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig77898.15463.1
Unique Name	prot_H-elongata_contig77898.15463.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	123

Homology

[Close]

BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5L467_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L467_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 4.620e-59
Identity = 91/122 (74.59%), Postives = 99/122 (81.15%), Query Frame = 0

Query:    1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST 122
            MSFG QE  W D REC  WIS SW LR NNGSI+ QRP ILVLDDFKCH+DE+FIA L+   NT VI IPGGL PLLQPLDRMLNKQMKRLLRGKYTAY+A+AVAD  +GK KPP RG+VST
Sbjct:    1 MSFGVQEKSWSDQRECNGWISGSWNLRPNNGSIVQQRPCILVLDDFKCHKDESFIAALKNDANTIVIFIPGGLAPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKQKPPERGVVST 122

[Close]

BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 5.760e-58
Identity = 92/122 (75.41%), Postives = 103/122 (84.43%), Query Frame = 0

Query:    1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST 122
            MSFG QE  W D REC  WIS SW+LR NNGSI+ QRP ILVLDDFKCH+DE +IA L++  NT VI+IPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY+A+AVAD  +GKLKPP RG+VST
Sbjct:  217 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVST 338

[Close]

BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 4.630e-57
Identity = 91/122 (74.59%), Postives = 99/122 (81.15%), Query Frame = 0

Query:    1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST 122
            MSFG QE  W D REC  WIS SW+LR NNGSII QR  ILVLDDFKCH+ E FIA L++  NT VI IPGG TPLLQPLDRMLNKQMKRLLRGKYTAY+A+AVAD  +GKLKPP RG+VST
Sbjct:    1 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIIQQRLCILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVST 122

[Close]

BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 1.570e-56
Identity = 88/122 (72.13%), Postives = 99/122 (81.15%), Query Frame = 0

Query:    1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST 122
            MSFG QE  W D REC  WIS SW+ R NNGSI+ QRP ILVLDDFKC +DE FIA L++  NT  I IPGGLTPLLQPLDR+LNKQMKR+LRGKYTAY+A+AVAD  +GKLKPP RG+VST
Sbjct:    1 MSFGVQEKSWSDQRECNGWISGSWKFRPNNGSIVQQRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVST 122

[Close]

BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5L4U1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U1_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 2.360e-56
Identity = 88/122 (72.13%), Postives = 100/122 (81.97%), Query Frame = 0

Query:    1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST 122
            MSFG Q   W D REC  WIS SW+LR NNGSI+ QRP ILVLDDFKCH+DE FIA L++  NT +I IPGG+T LLQPLDR+LNKQMKRLLRGKYTAY+A+AVAD  +GKLKPP RG+VST
Sbjct:   78 MSFGVQGKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIIIFIPGGMTLLLQPLDRLLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVST 199

[Close]

BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 3.470e-56
Identity = 90/122 (73.77%), Postives = 99/122 (81.15%), Query Frame = 0

Query:    1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST 122
            MSFG QE  W D REC  WIS SW+LR NNGSI+ QRP ILVLDD KCH+ E FIA L++  NT VI IPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY+ +AVAD  +GKLKPP RG+VST
Sbjct:   98 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVST 219

[Close]

BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5JTI5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI5_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 1.450e-55
Identity = 87/122 (71.31%), Postives = 98/122 (80.33%), Query Frame = 0

Query:    1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST 122
            MSFG QE  W   REC  WIS SW+LR NNGSI+ QRP ILVLDDFKCH+ E F+A L++  NT VI IPGGLTPL+QPLDRMLNKQMKRLL GKYTAY+A+AV D  +GKLKPP RG+VST
Sbjct:    1 MSFGMQEKSWSYHRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKAEGFMAALKRDANTMVIFIPGGLTPLVQPLDRMLNKQMKRLLWGKYTAYSASAVIDARSGKLKPPERGVVST 122

[Close]

BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 1.620e-55
Identity = 89/122 (72.95%), Postives = 99/122 (81.15%), Query Frame = 0

Query:    1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST 122
            MSFG QE  WCD REC LWI +SW+LR NNGSI+ QR  ILVLDDFKCH+D+ FIA L+++ NT VI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA+TA A  DP TGKL PP RG V+T
Sbjct:  337 MSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVAT 458

[Close]

BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 2.060e-55
Identity = 91/122 (74.59%), Postives = 100/122 (81.97%), Query Frame = 0

Query:    1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST 122
            MSFG QE  W D REC  WIS SW+LR NNGSI+ QRP ILVLDDFKCH+DE FIA L++  NT VI IPG LTPLLQPLDRMLNKQMKRLLR KYTAY+A+AVAD  +GKLKPP RG+VST
Sbjct:  217 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVST 338

[Close]

BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 3.550e-55
Identity = 92/122 (75.41%), Postives = 100/122 (81.97%), Query Frame = 0

Query:    1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST 122
            MSFG QE  W D REC  WIS SW+LR NNGSI+ QRP ILVLDDFKCH DE FIA L++  NT VI IPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY+ +AVAD  +GKLKPP RG+VST
Sbjct:  412 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVST 533

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot

BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L467_9PHAE	4.620e-59	74.59	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JUK2_9PHAE	5.760e-58	75.41	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JBJ7_9PHAE	4.630e-57	74.59	DDE-1 domain-containing protein n=2 Tax=Ectocarpus...	[more]
A0A6H5L8W0_9PHAE	1.570e-56	72.13	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5L4U1_9PHAE	2.360e-56	72.13	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KQK9_9PHAE	3.470e-56	73.77	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JTI5_9PHAE	1.450e-55	71.31	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KRZ1_9PHAE	1.620e-55	72.95	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5K6L9_9PHAE	2.060e-55	74.59	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JHT8_9PHAE	3.550e-55	75.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004875	DDE superfamily endonuclease domain	PFAM	PF03184	DDE_1	coord: 1..100 e-value: 3.1E-10 score: 40.0
None	No IPR available	PANTHER	PTHR19303	TRANSPOSON	coord: 6..119
None	No IPR available	PANTHER	PTHR19303:SF23	POGO TRANSPOSABLE ELEMENT WITH KRAB DOMAIN	coord: 6..119

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig77898	contig	H-elongata_contig77898:164..532 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig77898.15463.1	mRNA_H-elongata_contig77898.15463.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig77898 2..532 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig77898.15463.1 ID=prot_H-elongata_contig77898.15463.1|Name=mRNA_H-elongata_contig77898.15463.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHR
DEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYT
ATAVADPTTGKLKPPCRGMVST*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004875	DDE_SF_endonuclease_dom