prot_H-elongata_contig77797.15456.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77797.15456.1
Unique Nameprot_H-elongata_contig77797.15456.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length279
Homology
BLAST of mRNA_H-elongata_contig77797.15456.1 vs. uniprot
Match: A0A2P4Y3Q2_9STRA (Pre-mRNA-processing factor (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3Q2_9STRA)

HSP 1 Score: 263 bits (673), Expect = 2.180e-83
Identity = 165/300 (55.00%), Postives = 205/300 (68.33%), Query Frame = 0
Query:    1 GAPSNYVAGLGRGAVGFTTRSDIGPARAPLPEGGAGPPGAAKDPDFGPAPKGYIAGRGRGMGDLAKANHEGAGRGAGRGSTGAVGGT--------DLSESNFDEFSGYRER-LFGDTPYDHDDEEADRIYEAIDEHVDTRRKRRREVAQIEAMKKEREERPKISDQFADLKGHLADVSQREWEAIPDVGDYSLKYKQS----KRKEVFTPMPDHVIEGARNESAVTLGSVTPGTS--------TANMSSLSHARGTVLGLKLDKMSDSVTGQTAVNPKGYLTDLNSLKINSDAEVGDIEK 279
            GAP+NYV GLGRGAVGFTTRSDIGPARAP+ + G       +D  F P      AGRGRG+ ++       AGRG+G    G  G          D SE+N+DEFSGY  R LF DTPYD DD+EAD IYE +DE +D RRKRRRE+ Q+E +KK R+E PKISDQFADLK  L ++S  EWE IPD+GDYSLKYK +    KR E+F P+PD V+ GA   S ++ G++TP  +        T++++ L+ ARG  L  KLDKMSDS++GQT V+PKGYLTDLNSLK+ SDAE+GDI+K
Sbjct:   15 GAPANYVPGLGRGAVGFTTRSDIGPARAPMTQDGT------QDAPFLPP-----AGRGRGV-EIPGRPGPSAGRGSGTAGMGGFGREKDENEDFGDYSETNYDEFSGYSSRGLFQDTPYDQDDKEADDIYEQVDERMDARRKRRRELKQLEELKKARKEMPKISDQFADLKSSLQNMSDAEWEMIPDIGDYSLKYKINTALQKRNEMFAPVPDSVL-GANAGSTIS-GTITPAGNGIETPSGMTSSVTGLAGARGAQLSHKLDKMSDSISGQTVVDPKGYLTDLNSLKLTSDAEIGDIKK 300          
BLAST of mRNA_H-elongata_contig77797.15456.1 vs. uniprot
Match: A0A4D9D6Q2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6Q2_9STRA)

HSP 1 Score: 277 bits (709), Expect = 4.550e-83
Identity = 163/290 (56.21%), Postives = 199/290 (68.62%), Query Frame = 0
Query:    1 GAPSNYVAGLGRGAVGFTTRSDIGPARAPLPEGGAGPPGAAKDPDFGPAPKGYIAGRGRGMGDLAKANHEGA-GRGAGRGSTGAVGGTDLSESNFDEFSGYRERLFG-DTPYDHDDEEADRIYEAIDEHVDTRRKRRREVAQIEAMKKEREERPKISDQFADLKGHLADVSQREWEAIPDVGDYSLKYKQSKRKEVFTPMPDHVIEGARNESAVTLGSVTPGTS---------TANMSSLSHARGTVLGLKLDKMSDSVTGQTAVNPKGYLTDLNSLKINSDAEVGDIEK 279
            GAP  Y AG GRGA+GFTTRSDIGPAR+ +PE            +FG  P GY+AGRGRGMGDLA++  EG   R  G    G     D SESN+D+FSGY   LFG D+PY+ DD EAD+IY+AID+ +D+RRKRRRE   +E++KK R ERPK  DQF DLK  L +VS  EW  IPDVGD SLK+KQ KR+EVFTP PDH+IE  R         + P T          +++++ LS AR TVL +KLDKMSDSV+GQT V+PKGYLTDLNS+KIN+D EVGDI++
Sbjct:   15 GAPQGYQAGFGRGAIGFTTRSDIGPARSSVPE-----------VNFGQPPPGYVAGRGRGMGDLARSQAEGGLPREEGDRDKG-----DYSESNYDDFSGYGGALFGGDSPYEDDDREADKIYQAIDDRMDSRRKRRREEQLLESLKKARAERPKAGDQFTDLKADLKNVSMEEWMGIPDVGDQSLKFKQRKRQEVFTPAPDHLIESQRAALVDAAAPIDPRTGLQTPMSAGGSSSIAGLSQARETVLSIKLDKMSDSVSGQTVVDPKGYLTDLNSIKINTDTEVGDIKR 288          
BLAST of mRNA_H-elongata_contig77797.15456.1 vs. uniprot
Match: D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 1.760e-80
Identity = 142/163 (87.12%), Postives = 148/163 (90.80%), Query Frame = 0
Query:  123 AIDEHVDTRRKRRREVAQIEAMKKEREERPKISDQFADLKGHLADVSQREWEAIPDVGDYSLKYKQSKRKEVFTPMPDHVIEGARNESAVT------LGSVTPGTSTANMSSLSHARGTVLGLKLDKMSDSVTGQTAVNPKGYLTDLNSLKINSDAEVGDIEK 279
            AIDEHVDTRRKRRRE AQ+EAMKKEREERPKISDQFADLKGHLA VSQ EWEAIPDVGDYSLKYKQSKR+E+FTPMPDHVIEGARN+ AV       LG  TPGTST N+SSL HARGTVLGLKLDKMSDSVTGQTAVNPKGYLTDLNSLKI+SDAEVGDIEK
Sbjct:    3 AIDEHVDTRRKRRREEAQVEAMKKEREERPKISDQFADLKGHLAGVSQSEWEAIPDVGDYSLKYKQSKRREIFTPMPDHVIEGARNDGAVVGTMDPALGGATPGTSTTNISSLGHARGTVLGLKLDKMSDSVTGQTAVNPKGYLTDLNSLKISSDAEVGDIEK 165          
BLAST of mRNA_H-elongata_contig77797.15456.1 vs. uniprot
Match: A0A5D6YDN0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDN0_9STRA)

HSP 1 Score: 268 bits (686), Expect = 1.050e-79
Identity = 170/309 (55.02%), Postives = 206/309 (66.67%), Query Frame = 0
Query:    1 GAPSNYVAGLGRGAVGFTTRSDIGPARAPL-PEGGAGPPGAAK------DPDFGPAPKGYIAGRGRGMG-DLAKA-----------NHEGAGRGA-GRGSTGAVGGTDLSESNFDEFSGYRER-LFGDTPYDHDDEEADRIYEAIDEHVDTRRKRRREVAQIEAMKKEREERPKISDQFADLKGHLADVSQREWEAIPDVGDYSLKYKQS----KRKEVFTPMPDHVIEG-----ARNESAVTLGSVTPGTSTANMSSLSHARGTVLGLKLDKMSDSVTGQTAVNPKGYLTDLNSLKINSDAEVGDIEK 279
            GAP+NYV GLGRGAVGFTTRSDIGPAR+PL PEG A   GA +       P   PAP  ++ G GRG G D A                 AG G  GR +       D SE+N+DEFSGY    LF DTPYD DD EAD IY+++DE +DTRRKRRREV  +E +KK R+ERPKISDQFADLK  L  +S  EW+ IPD+GDYSLK+K +    KR E+F P+PDH++ G     A N +    G++TP   T+ ++ L+ ARG VL  KLDKMSDS+TGQT V+PKGYLTDLNSLK+ SDAE+GDI+K
Sbjct:   15 GAPANYVPGLGRGAVGFTTRSDIGPARSPLTPEGLAADGGALRAAPTTAGPPGPPAP--FLPGAGRGRGSDFAGGAXXXXXXXXXXXXXXAGLGGFGRATDENEDFGDYSETNYDEFSGYSSGGLFQDTPYDQDDREADDIYDSVDERMDTRRKRRREVRMLEELKKARQERPKISDQFADLKAGLRGMSDAEWDQIPDIGDYSLKFKTNTALQKRNELFAPLPDHLLAGNAGAVAANGAGALNGTITPSGMTSTITGLAEARGAVLSHKLDKMSDSITGQTVVDPKGYLTDLNSLKLTSDAEIGDIKK 321          
BLAST of mRNA_H-elongata_contig77797.15456.1 vs. uniprot
Match: K3WCC0_GLOUD (PRP1_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCC0_GLOUD)

HSP 1 Score: 265 bits (677), Expect = 2.070e-78
Identity = 169/310 (54.52%), Postives = 203/310 (65.48%), Query Frame = 0
Query:    1 GAPSNYVAGLGRGAVGFTTRSDIGPARAPL-PEGGAGPPGAAKDPDFGPAPKGYIAGRGRGMG-DLAKANHE-----------GAGRGAGRGSTGAVGGTDLSESNFDEFSGYRE-RLFGDTPYDHDDEEADRIYEAIDEHVDTRRKRRREVAQIEAMKKEREERPKISDQFADLKGHLADVSQREWEAIPDVGDYSLKYKQS----KRKEVFTPMPDHVIEG-----ARNESAVTLGSVTPGTS--------TANMSSLSHARGTVLGLKLDKMSDSVTGQTAVNPKGYLTDLNSLKINSDAEVGDIEK 279
            GAP+NYV GLGRGAVGFTTRSDIGPARAP+ P+G   P G A      P    Y+ G GRG G DL                 G G G GR         D SE+N+D+FSGY    LF DTPYD DD EAD IYE+IDE +D+RRKRRREV  +E +KK R+ERPKISDQFADLK  L ++S  EWE IPD+GDYSLKYK +    KR E+F P+PDH++ G     A N ++   G++TP           T+ ++ L+ ARG VL  KLDKMSDS+TGQT V+PKGYLTDLNSLK+ SDAE+GDI+K
Sbjct:   15 GAPANYVPGLGRGAVGFTTRSDIGPARAPMAPDGSGAPVGGAPGXXAPP----YLPGAGRGRGVDLPXXXXXXXXXXXXXXXXGMG-GFGRDVDENEDYGDYSETNYDQFSGYSSVGLFQDTPYDQDDREADDIYESIDERMDSRRKRRREVKMLEELKKARQERPKISDQFADLKAGLQNMSDAEWEMIPDIGDYSLKYKTNTALQKRNEMFAPVPDHLLAGNASGVAANGASALNGTITPAGGMETPGNGMTSTITGLAEARGAVLSHKLDKMSDSITGQTVVDPKGYLTDLNSLKLTSDAEIGDIKK 319          
BLAST of mRNA_H-elongata_contig77797.15456.1 vs. uniprot
Match: A0A1V9ZC51_9STRA (Pre-mRNA-processing factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC51_9STRA)

HSP 1 Score: 265 bits (677), Expect = 7.250e-78
Identity = 161/296 (54.39%), Postives = 198/296 (66.89%), Query Frame = 0
Query:    2 APSNYVAGLGRGAVGFTTRSDIGPARAPLPEGGAGPPGAAKDPDFGPAPKGYIAGRGRG--MGDLAKANHEGAGRGAGRGSTGAVGGT--------DLSESNFDEFSGYRER-LFGDTPYDHDDEEADRIYEAIDEHVDTRRKRRREVAQIEAMKKEREERPKISDQFADLKGHLADVSQREWEAIPDVGDYSLKYKQSKRKEVFTPMPDHVIEGARNESAVTLGSVTP-------GTSTANMSSLSHARGTVLGLKLDKMSDSVTGQTAVNPKGYLTDLNSLKINSDAEVGDIEK 279
            AP+NYVAG+GRGA+GFTTRSDIGPAR+  P    G                   GRGRG  MG +      G GRG+G    G  G          D SE+N+DEFSGY    LF D PYD DD EAD IY  IDE +D++RKRRRE+ Q+E MKK R ERPKISDQFADLK  L++VS  EWEAIPD+GD+SL+YKQ +R E++TP+PD++++     S   +G+ TP       G  T++++ L+ ARG VL LKLDKMSDS++GQT V+PKGYLTDLNSLKI SDAEVGDI+K
Sbjct:  175 APANYVAGVGRGAIGFTTRSDIGPARSDDPVDLIG------------------MGRGRGLTMGGI-PIGMPGGGRGSGTAGVGGFGRETDESGDRGDYSETNYDEFSGYTGAGLFNDMPYDQDDAEADDIYAKIDERMDSKRKRRRELKQLEDMKKARRERPKISDQFADLKTSLSEVSDAEWEAIPDIGDHSLRYKQQRRAEIYTPVPDNLLDPRTQTSTTVVGTDTPSGLASTIGGMTSSLTGLAEARGAVLSLKLDKMSDSISGQTVVDPKGYLTDLNSLKITSDAEVGDIKK 451          
BLAST of mRNA_H-elongata_contig77797.15456.1 vs. uniprot
Match: A0A067CRR5_SAPPC (PRP1_N domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRR5_SAPPC)

HSP 1 Score: 262 bits (670), Expect = 1.540e-77
Identity = 161/294 (54.76%), Postives = 196/294 (66.67%), Query Frame = 0
Query:    2 APSNYVAGLGRGAVGFTTRSDIGPARAPLPEGGAGPPGAAKDPDFGPAPKGYIAGRGRGMGDLAKANHEGAGRGAGRGSTGAVGGT--------DLSESNFDEFSGYRER-LFGDTPYDHDDEEADRIYEAIDEHVDTRRKRRREVAQIEAMKKEREERPKISDQFADLKGHLADVSQREWEAIPDVGDYSLKYKQSKRKEVFTPMPDHVIEGARNESAVTLGSVTP-------GTSTANMSSLSHARGTVLGLKLDKMSDSVTGQTAVNPKGYLTDLNSLKINSDAEVGDIEK 279
            AP+NYVAGLGRGA+GFTTRSDIGPAR   P    G  G  +    G AP     G    MG +      G GRG+G    G  G          D SE+N+DEFSGY    LF DTPYD DD EAD IY  IDE +D++RKRRRE+ Q+E +KK R ERPKISDQFADLK  L+ VS  EWEAIPD+GD+SL+YKQ +R E++TP+PD +++     +   +G+ TP       G  T++ + L+ ARG VL LKLDKMSDS++GQT V+PKGYLTDLNSLKI SDAEVGDI+K
Sbjct:   12 APANYVAGLGRGAIGFTTRSDIGPARPDDPVDMLGAMGRGR----GTAPXXXXGGLM--MGGI-PIGMPGGGRGSGTAGVGGFGRETDESGDRGDYSETNYDEFSGYTGAGLFNDTPYDQDDAEADDIYAKIDERMDSKRKRRREMKQLEDIKKARRERPKISDQFADLKTTLSTVSDAEWEAIPDIGDHSLRYKQQRRAEIYTPVPDSLLDARAQTTNTVVGTDTPSGLASTVGGMTSSFTGLAEARGAVLSLKLDKMSDSISGQTVVDPKGYLTDLNSLKITSDAEVGDIKK 298          
BLAST of mRNA_H-elongata_contig77797.15456.1 vs. uniprot
Match: A0A1V9ZAY2_9STRA (Pre-mRNA-processing factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAY2_9STRA)

HSP 1 Score: 261 bits (668), Expect = 2.940e-77
Identity = 161/295 (54.58%), Postives = 197/295 (66.78%), Query Frame = 0
Query:    2 APSNYVAGLGRGAVGFTTRSDIGPARAPLPEGGAGPPGAAKDPDFGPAPKGYIAGRGRGMGDLAKANHEGAGRGAGRGSTGAVGGT--------DLSESNFDEFSGYRER-LFGDTPYDHDDEEADRIYEAIDEHVDTRRKRRREVAQIEAMKKEREERPKISDQFADLKGHLADVSQREWEAIPDVGDYSLKYKQSKRKEVFTPMPDHVIEG-ARNESAVTLGSVTP-------GTSTANMSSLSHARGTVLGLKLDKMSDSVTGQTAVNPKGYLTDLNSLKINSDAEVGDIEK 279
            AP+NYVAGLGRGA+GFTTRSDIGPAR   P    G  G  +     P P G        MG +      G GRG+G    G  G          D SE+N+DEFSGY    LF D PYD DD EAD IY  +DE +D++RKRRRE+ Q+E MKK R ERPKISDQFADLK  LA VS  EWEAIPD+GD+SL+YKQ++R E++TP+PD++++   +  + V  G  TP       G  T++++ L+ ARG VL LKLDKMSDS++GQT V+PKGYLTDLNSLKI SDAEVGDI+K
Sbjct:   12 APANYVAGLGRGAIGFTTRSDIGPARPDDPVDMLGAMGRGRG--MAPPPGGLT------MGGI-PIGLPGGGRGSGTAGVGGFGRETDDSGDRGDYSETNYDEFSGYTGTGLFNDMPYDQDDAEADDIYAKVDERMDSKRKRRRELKQLEDMKKARRERPKISDQFADLKTTLATVSDAEWEAIPDIGDHSLRYKQARRAEIYTPVPDNLLDPRTQTSTTVVSGLDTPSGMASTVGGMTSSLTGLAEARGAVLSLKLDKMSDSISGQTVVDPKGYLTDLNSLKITSDAEVGDIKK 297          
BLAST of mRNA_H-elongata_contig77797.15456.1 vs. uniprot
Match: A0A6A5AMU0_9STRA (PRP1_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AMU0_9STRA)

HSP 1 Score: 240 bits (613), Expect = 8.970e-75
Identity = 156/294 (53.06%), Postives = 188/294 (63.95%), Query Frame = 0
Query:    2 APSNYVAGLGRGAVGFTTRSDIGPARA--PLPEGGAGPPGAAKDPDFG----PAPKGYIAGRGRGMGDLAKANHEGAGRGAGRGSTGAVGGTDLSESNFDEFSGYRERLFGDTPYDHDDEEADRIYEAIDEHVDTRRKRRREVAQIEAMKKEREERPKISDQFADLKGHLADVSQREWEAIPDVGDYSLKYKQSKRK-EVFTPMPDHVIEGARNESA--VTLGSVTP---GTSTANMSS----LSHARGTVLGLKLDKMSDSVTGQTAVNPKGYLTDLNSLKINSDAEVGDIEK 279
            AP+NYVAGLGRGA+GFTTRSDIGPAR+  P      G PG  +         PAP   I   G       + +      G GR    A G                  LF DTPYD DD EAD IY  +DEH+D RRKRRRE+ Q+E MKK R ERPKISDQFADLK  L  VS  EWEAIPD+GD+SL+YK S++K ++FTP+PDH+++   + +A  V LG  TP   GTS + M+S    L+ ARG VL LKLDKMSDS++GQT V+PKGY+T+LNSLKI SDAEVGDI+K
Sbjct:   12 APANYVAGLGRGAIGFTTRSDIGPARSDDPTDIAATGIPGMGRGRGVPLPQQPAPAMMIPPGGXXXXXXXRGSGTAGVGGFGR-EVDASGDRGXXXXXXXXXXXXGAGLFNDTPYDKDDAEADDIYAQVDEHMDNRRKRRRELKQLEDMKKARRERPKISDQFADLKSSLKGVSDAEWEAIPDIGDHSLRYKASQKKSDIFTPVPDHILDTRASTTASNVVLGGDTPLQTGTSISGMTSSLTGLAEARGAVLSLKLDKMSDSISGQTVVDPKGYMTELNSLKITSDAEVGDIKK 304          
BLAST of mRNA_H-elongata_contig77797.15456.1 vs. uniprot
Match: F0VZ29_9STRA (Uncharacterized protein AlNc14C1G170 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZ29_9STRA)

HSP 1 Score: 253 bits (647), Expect = 5.080e-74
Identity = 163/307 (53.09%), Postives = 197/307 (64.17%), Query Frame = 0
Query:    2 APSNYVAGLGRGAVGFTTRSDIGPARAPLPEGGAGPPGAAKDPDFGPAPKGYIAGRGRGMGDLAKANHE----GAGRGAGRGSTGAVGGT--------DLSESNFDEFSGYRER-LFGDTPYDHDDEEADRIYEAIDEHVDTRRKRRREVAQIEAMKKEREERPKISDQFADLKGHLADVSQREWEAIPDVGDYSLKYKQSK----RKEVFTPMPDHVIE---GARNESAVTLGSVTP---------GTSTANMSSLSHARGTVLGLKLDKMSDSVTGQTAVNPKGYLTDLNSLKINSDAEVGDIEK 279
            AP NYV GLGRGAVGFTTRSDIGPAR PL   G    GA   P         + GRGRG G     N       AGRG+G    G  G          D SESN+DEFSGY    LF DTPYD DD+EAD IYE IDE +D+RRKRRRE+  ++ +KK R+ERPKI+DQFADLK  L  VS  +W  IP++GD SLK+K +     R ++F P+PDH+I    G +++   + GS+TP         GTST+ ++ L+ ARG VL LKLDKMSDS+ GQT V+PKGYLTDLNSLKI SD E+GDI+K
Sbjct:   38 APENYVPGLGRGAVGFTTRSDIGPARNPLAPEGLAVAGAGPFPPI-------MMGRGRGRGTDVVPNEMLLPISAGRGSGTAGMGGFGRETDENEDFGDYSESNYDEFSGYTGAGLFQDTPYDKDDQEADTIYEMIDERMDSRRKRRRELKILQEVKKARQERPKIADQFADLKESLKTVSDEQWAQIPEIGDRSLKHKTNTALQIRNQMFVPVPDHLIASSTGLQSDKNASSGSITPSILGGNETPGTSTS-VTGLAEARGAVLSLKLDKMSDSIMGQTVVDPKGYLTDLNSLKITSDVEIGDIKK 336          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77797.15456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P4Y3Q2_9STRA2.180e-8355.00Pre-mRNA-processing factor (Fragment) n=1 Tax=Phyt... [more]
A0A4D9D6Q2_9STRA4.550e-8356.21Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
D7FHD2_ECTSI1.760e-8087.12PRP1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A5D6YDN0_9STRA1.050e-7955.02Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WCC0_GLOUD2.070e-7854.52PRP1_N domain-containing protein n=1 Tax=Globispor... [more]
A0A1V9ZC51_9STRA7.250e-7854.39Pre-mRNA-processing factor n=1 Tax=Thraustotheca c... [more]
A0A067CRR5_SAPPC1.540e-7754.76PRP1_N domain-containing protein n=2 Tax=Saprolegn... [more]
A0A1V9ZAY2_9STRA2.940e-7754.58Pre-mRNA-processing factor n=1 Tax=Achlya hypogyna... [more]
A0A6A5AMU0_9STRA8.970e-7553.06PRP1_N domain-containing protein (Fragment) n=1 Ta... [more]
F0VZ29_9STRA5.080e-7453.09Uncharacterized protein AlNc14C1G170 n=1 Tax=Albug... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010491PRP1 splicing factor, N-terminalPFAMPF06424PRP1_Ncoord: 2..30
e-value: 2.2E-11
score: 44.4
coord: 49..185
e-value: 1.9E-36
score: 125.7
IPR027108Pre-mRNA-processing factor 6/Prp1/STA1PANTHERPTHR11246:SF1PRE-MRNA-PROCESSING FACTOR 6coord: 2..279
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 2..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77797contigH-elongata_contig77797:925..2818 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77797.15456.1mRNA_H-elongata_contig77797.15456.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77797 925..2818 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77797.15456.1 ID=prot_H-elongata_contig77797.15456.1|Name=mRNA_H-elongata_contig77797.15456.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=279bp
GAPSNYVAGLGRGAVGFTTRSDIGPARAPLPEGGAGPPGAAKDPDFGPAP
KGYIAGRGRGMGDLAKANHEGAGRGAGRGSTGAVGGTDLSESNFDEFSGY
RERLFGDTPYDHDDEEADRIYEAIDEHVDTRRKRRREVAQIEAMKKEREE
RPKISDQFADLKGHLADVSQREWEAIPDVGDYSLKYKQSKRKEVFTPMPD
HVIEGARNESAVTLGSVTPGTSTANMSSLSHARGTVLGLKLDKMSDSVTG
QTAVNPKGYLTDLNSLKINSDAEVGDIEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010491PRP1_N
IPR027108Prp6/Prp1/STA1