prot_H-elongata_contig77781.15454.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77781.15454.1
Unique Nameprot_H-elongata_contig77781.15454.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length122
Homology
[Close]
BLAST of mRNA_H-elongata_contig77781.15454.1 vs. uniprot
Match: W4GZ05_9STRA (Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ05_9STRA)

HSP 1 Score: 214 bits (546), Expect = 6.020e-70
Identity = 118/136 (86.76%), Postives = 120/136 (88.24%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRK---------------GLKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKGIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRK               G+KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPK IQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of mRNA_H-elongata_contig77781.15454.1 vs. uniprot
Match: A0A1Z5K8H0_FISSO (Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A1Z5K8H0_FISSO)

HSP 1 Score: 214 bits (546), Expect = 6.020e-70
Identity = 118/136 (86.76%), Postives = 120/136 (88.24%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRK---------------GLKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKGIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRK               G+KKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPK IQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of mRNA_H-elongata_contig77781.15454.1 vs. uniprot
Match: K3XCW6_GLOUD (Histone domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XCW6_GLOUD)

HSP 1 Score: 213 bits (543), Expect = 1.240e-69
Identity = 116/126 (92.06%), Postives = 118/126 (93.65%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRK-----GLKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKGIQLARRIRGERS 121
            MARTKQTARKSTGGKAPR      G+KKPHRYRPGTVALREIRRYQKSTELLI KLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPK IQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRNAPATGGVKKPHRYRPGTVALREIRRYQKSTELLICKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 126
[Close]
BLAST of mRNA_H-elongata_contig77781.15454.1 vs. uniprot
Match: A0A6V1P6C6_HETAK (Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6C6_HETAK)

HSP 1 Score: 213 bits (543), Expect = 2.100e-69
Identity = 117/136 (86.03%), Postives = 120/136 (88.24%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRK---------------GLKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKGIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRK               G+KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLR+QGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPK IQLARRIRGERS
Sbjct:    7 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRYQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 142
[Close]
BLAST of mRNA_H-elongata_contig77781.15454.1 vs. uniprot
Match: A0A7S1BJN3_9STRA (Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A7S1BJN3_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.740e-69
Identity = 117/136 (86.03%), Postives = 120/136 (88.24%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRK---------------GLKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKGIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRK               G+KKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPK IQLARRIRGERS
Sbjct:   15 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 150
[Close]
BLAST of mRNA_H-elongata_contig77781.15454.1 vs. uniprot
Match: K0S7I6_THAOC (Histone domain-containing protein n=8 Tax=Bacillariophyta TaxID=2836 RepID=K0S7I6_THAOC)

HSP 1 Score: 214 bits (546), Expect = 6.590e-69
Identity = 118/136 (86.76%), Postives = 120/136 (88.24%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRK---------------GLKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKGIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRK               G+KKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPK IQLARRIRGERS
Sbjct:   74 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 209
[Close]
BLAST of mRNA_H-elongata_contig77781.15454.1 vs. uniprot
Match: UPI001A7EA027 (histone H3-like isoform X2 n=1 Tax=Simochromis diagramma TaxID=43689 RepID=UPI001A7EA027)

HSP 1 Score: 211 bits (537), Expect = 9.270e-69
Identity = 113/123 (91.87%), Postives = 118/123 (95.93%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKGL--KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKGIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRK L  KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQE++EAYLVGLFEDTNLCAIHAKRVTIMPK IQLARRIRGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQESSEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 123
[Close]
BLAST of mRNA_H-elongata_contig77781.15454.1 vs. uniprot
Match: Q8T7J7_EIMTE (Histone H3 n=19 Tax=Eukaryota TaxID=2759 RepID=Q8T7J7_EIMTE)

HSP 1 Score: 211 bits (538), Expect = 9.990e-69
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRK---------------GLKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKGIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRK               G+KKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFK+DLRFQ SAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPK IQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPVAGGIKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of mRNA_H-elongata_contig77781.15454.1 vs. uniprot
Match: D7G4I9_ECTSI (Similar to histone H3.2 n=2 Tax=PX clade TaxID=569578 RepID=D7G4I9_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 1.420e-68
Identity = 117/136 (86.03%), Postives = 119/136 (87.50%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRK---------------GLKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKGIQLARRIRGERS 121
            MARTKQTARKSTG +APRK               G+KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPK IQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGRQAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of mRNA_H-elongata_contig77781.15454.1 vs. uniprot
Match: A7RJG4_NEMVE (Predicted protein n=6 Tax=Eumetazoa TaxID=6072 RepID=A7RJG4_NEMVE)

HSP 1 Score: 211 bits (536), Expect = 2.020e-68
Identity = 115/136 (84.56%), Postives = 119/136 (87.50%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRK---------------GLKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKGIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRK               G+KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL+REIAQDFK+DLRFQ SAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPK IQLARRIRGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLIREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77781.15454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W4GZ05_9STRA6.020e-7086.76Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ... [more]
A0A1Z5K8H0_FISSO6.020e-7086.76Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepI... [more]
K3XCW6_GLOUD1.240e-6992.06Histone domain-containing protein n=1 Tax=Globispo... [more]
A0A6V1P6C6_HETAK2.100e-6986.03Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
A0A7S1BJN3_9STRA2.740e-6986.03Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A... [more]
K0S7I6_THAOC6.590e-6986.76Histone domain-containing protein n=8 Tax=Bacillar... [more]
UPI001A7EA0279.270e-6991.87histone H3-like isoform X2 n=1 Tax=Simochromis dia... [more]
Q8T7J7_EIMTE9.990e-6985.29Histone H3 n=19 Tax=Eukaryota TaxID=2759 RepID=Q8T... [more]
D7G4I9_ECTSI1.420e-6886.03Similar to histone H3.2 n=2 Tax=PX clade TaxID=569... [more]
A7RJG4_NEMVE2.020e-6884.56Predicted protein n=6 Tax=Eumetazoa TaxID=6072 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 3..17
score: 37.39
coord: 19..40
score: 85.57
coord: 43..60
score: 97.46
coord: 65..83
score: 76.89
coord: 83..99
score: 96.93
coord: 99..120
score: 90.32
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 19..121
e-value: 1.2E-70
score: 250.7
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 1..120
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 52..60
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..117
e-value: 1.5E-47
score: 161.2
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..121
e-value: 4.3E-66
score: 222.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..118
NoneNo IPR availablePANTHERPTHR11426:SF224coord: 1..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77781contigH-elongata_contig77781:1180..1824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77781.15454.1mRNA_H-elongata_contig77781.15454.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77781 1180..1824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77781.15454.1 ID=prot_H-elongata_contig77781.15454.1|Name=mRNA_H-elongata_contig77781.15454.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
MARTKQTARKSTGGKAPRKGLKKPHRYRPGTVALREIRRYQKSTELLIRK
LPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHA
KRVTIMPKGIQLARRIRGERS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold