prot_H-elongata_contig77689.15447.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77689.15447.1
Unique Nameprot_H-elongata_contig77689.15447.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length201
Homology
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A6H5KD48_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD48_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 8.730e-109
Identity = 177/201 (88.06%), Postives = 188/201 (93.53%), Query Frame = 0
Query:    1 QACTDLDTLTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQVSTFS 201
            +ACTDLDTLTQQATLTS+AT EAD+K +INT I  TNNRVAHAKGLLQAMREETEAMK +  RAKPSEVRVRENLQNTLTRKFVD+AKDYQNRQN +KT+VKKKAERQILAVKP+ATEEELT VFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTY DVRRLEASI+ELHKMFMDLALLVDRQGEMLDQIEYQV + S
Sbjct:   64 KACTDLDTLTQQATLTSSATVEADAKSQINTTIANTNNRVAHAKGLLQAMREETEAMKKDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPSATEEELTTVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYHDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSAS 264          
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A836CD59_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD59_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.470e-62
Identity = 115/197 (58.38%), Postives = 150/197 (76.14%), Query Frame = 0
Query:    2 ACTDLDTLTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQ-GDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQV 197
            AC  LD+LT+ A           +K +I  V+ +TN  V+HAK LL  +R ET A+K + +R+  + +RVR NL+ T TRKFVDVAK+YQN+QN +K+ VK KAER + AVKPT TE+E+ AVF+Q+DGV+RV+EAA++QQ GDPVEV +VL EV+D Y DVRRLEASI+ELH+MFMDLALLV++QGE LD IE+QV
Sbjct:   57 ACKQLDSLTEAAIFAPMDKGGETAKDKITEVLAKTNKHVSHAKTLLHDLRTETAALKRDPKRSTNANIRVRANLETTFTRKFVDVAKEYQNKQNRYKSQVKGKAERAVKAVKPTVTEDEMAAVFQQDDGVKRVLEAAVMQQSGDPVEVANVLAEVQDQYEDVRRLEASILELHRMFMDLALLVEQQGETLDVIEFQV 253          
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A836CCH9_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCH9_9STRA)

HSP 1 Score: 170 bits (430), Expect = 7.270e-49
Identity = 101/196 (51.53%), Postives = 137/196 (69.90%), Query Frame = 0
Query:    2 ACTDLDTLTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQV 197
            AC +LD L   A         A +K+ ++ ++T+TN   +H+K LL A+R ET  +K + +    + +RVR NL+ +   KFVD AK+Y+N+Q+ ++  VK+KAER I AVKP  TEEE+TAVF  EDGV RV++AA+LQ    ++   VL EV+DTY+DVRRLEASIMELH+MFMDLALLV++QGE LD IE QV
Sbjct:   51 ACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSRTGID--DVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQV 244          
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A4D9D821_9STRA (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D821_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.040e-43
Identity = 94/187 (50.27%), Postives = 127/187 (67.91%), Query Frame = 0
Query:   11 QQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQV 197
            Q+A L +    EA   + +N VI  TN + A AK +L  M++ET  ++ +S R  PS++R+R+NL NTLTRKFVDV KDYQN Q  +K  +K K +RQ+  VKP A+ EE+ AVF+   G  +V+  AIL+ G    + +V + V D Y+DV  LEASI ELH+MF+D ALLV++QGEMLDQIEYQV
Sbjct:   80 QEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDS-RCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILK-GANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQV 264          
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A7S2FD15_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FD15_9STRA)

HSP 1 Score: 144 bits (362), Expect = 9.230e-39
Identity = 86/200 (43.00%), Postives = 126/200 (63.00%), Query Frame = 0
Query:    2 ACTDLDTLTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQVSTFS 201
            AC ++  + QQ  L +  T+E +  ++++ +I +TN      K +L  M+EET+ +   + +AK +E R+RENL NTLTRKF++V K+YQ RQ  +K  VKKK  RQ+  VK  AT EE+  V +   G   + ++AIL+  +  EV     +  D Y+DV RLE S+ ELH+MF+D ALL ++QGE+LDQIEYQV   S
Sbjct:   52 ACKEIQNINQQMLLAT--TSETEISQKLSPIIDKTNKIAQRCKTILNTMKEETDTLARENDKAKANEQRIRENLVNTLTRKFMEVVKEYQKRQQDYKDDVKKKVTRQVKIVKEDATPEEIDQVMKSAGGTGAMFKSAILKSANN-EVVEAYSQAADQYQDVLRLEESMQELHQMFVDFALLTEQQGELLDQIEYQVHAAS 248          
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A812WGN8_SYMMI (Stx3 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WGN8_SYMMI)

HSP 1 Score: 135 bits (341), Expect = 7.310e-37
Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = 0
Query:   32 VITRTNNRVAHAKGLLQAMREETEAMKTN--SQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQ 196
            +IT TN R A AK LLQ +RE+ + +K++  + + + +E+R+RENL NTLTRKFVDV K YQN Q  FK  +KKK +RQI  VKP AT EE+  V     G   + +  IL+      V +    V+D Y+DV RLEAS+ +LH+MF+D A L ++QGE+LDQIE+Q
Sbjct:   20 IITDTNKRAALAKQLLQRLREDCDGIKSSPSTSQKEANELRIRENLINTLTRKFVDVMKSYQNAQQKFKLDIKKKMKRQIQIVKPDATPEEIDEVIISGGGAGEIFKNVILKGTPSDSVRNATRNVQDKYQDVMRLEASVAQLHEMFVDFAQLTEQQGELLDQIEFQ 186          
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: K0SR65_THAOC (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SR65_THAOC)

HSP 1 Score: 140 bits (353), Expect = 1.020e-36
Identity = 84/192 (43.75%), Postives = 120/192 (62.50%), Query Frame = 0
Query:    6 LDTLTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQV 197
            ++ L  +A L ++ T EA   + I T++  TN R    K LL  ++EE   +K   ++AKP+++RVRENL NTL RKF+D  K YQN Q  +KT VKKK  RQ+  +KP AT++E+  +   E G + + +  IL  G   ++      V   Y+D+  LEAS+ ELH+MF+D ALL D+QGE+LDQIEYQV
Sbjct:  100 INALKDKAVLATSETEEAQISEMIRTLVEGTNGRAKTCKNLLGLLKEENSNLK-KEEKAKPTDLRVRENLVNTLLRKFIDEMKRYQNAQQQYKTDVKKKVTRQVQIIKPDATDQEVDDIMRSEGGREALYQQQILSGGVNDQIKTQYRAVAGKYQDILTLEASVAELHQMFLDFALLTDQQGELLDQIEYQV 290          
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A7S2LQF4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LQF4_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.780e-36
Identity = 77/167 (46.11%), Postives = 105/167 (62.87%), Query Frame = 0
Query:   33 ITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQVST 199
            +T TN R    K +L  ++EE   +K     AKP+++RVRENL NTL RKF+D  K YQN Q  +KT VKKK  RQ+  V+P AT++E+  +   E G + + +  IL  G   ++      V   Y+DV  LEAS+ ELH+MF+D ALL ++QGE+LDQIEYQV T
Sbjct:    1 VTDTNGRAKKCKNMLGLLKEENANLKKTEGAAKPTDLRVRENLVNTLLRKFIDEMKRYQNSQQQYKTDVKKKVTRQVQMVRPNATDQEVDEIMRSEGGREALYQQQILSGGVNDQIKTQYRAVAGKYQDVLTLEASVAELHQMFLDFALLTEQQGELLDQIEYQVKT 167          
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A7S2RH32_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RH32_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.540e-35
Identity = 78/176 (44.32%), Postives = 108/176 (61.36%), Query Frame = 0
Query:   22 EADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQV 197
            EAD    +  +I  TN R    K +L  ++EE E +K  +   KPS++R+R+NL NTLTRKFVD  K YQN Q  +KT ++KKA RQI  +KP ATEEE+  + + + G + + +  IL  G    +      V   Y+DV  LE S+ ELH++F D ALL D+QGE+LDQIE+ V
Sbjct:   11 EADLSNEMRPLIDETNKRAKRTKNILSLLKEENEKLKKKN--VKPSDLRIRQNLCNTLTRKFVDEIKQYQNAQQKYKTDLRKKAARQIKVIKPDATEEEVDVIMKTDGGREALYKETILSGGVNDNIKTAYANVAGKYQDVLALEQSVAELHQLFQDFALLTDQQGELLDQIEFNV 184          
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A7S2K4X5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K4X5_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.130e-35
Identity = 83/192 (43.23%), Postives = 120/192 (62.50%), Query Frame = 0
Query:    9 LTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQ-GDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQVST 199
            + ++A L  +   E D   R+  ++  TN +  HAK LL+ ++++ E  K      K S++R+RENL NTLTRKFVD  K+YQN Q  +K+ +KKK +RQ+  VKP AT EE+ AV + E G   + +  IL    DP++  +    V   Y+DV  LEAS+ ELH+MF D ALL ++QGE+L+QIE+QV T
Sbjct:   67 INEEAVLAISTDKERDLSNRLRPLVDSTNKKAKHAKALLELIKKQNEQEKGKGN-IKNSDMRIRENLNNTLTRKFVDEMKEYQNAQQKYKSDIKKKVKRQVQIVKPDATNEEIDAVMKSEGGRDALYKDKILTGVADPIKNAYA--NVAGKYQDVLALEASVTELHQMFQDFALLTEQQGELLNQIEFQVET 255          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD48_9PHAE8.730e-10988.06t-SNARE coiled-coil homology domain-containing pro... [more]
A0A836CD59_9STRA2.470e-6258.38Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A836CCH9_9STRA7.270e-4951.53Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A4D9D821_9STRA2.040e-4350.27t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2FD15_9STRA9.230e-3943.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A812WGN8_SYMMI7.310e-3748.50Stx3 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
K0SR65_THAOC1.020e-3643.75t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2LQF4_9STRA4.780e-3646.11Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2RH32_9STRA1.540e-3544.32Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2K4X5_9STRA2.130e-3543.23Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006011Syntaxin, N-terminal domainPFAMPF00804Syntaxincoord: 7..187
e-value: 2.0E-25
score: 89.7
NoneNo IPR availableGENE3D1.20.58.70coord: 1..200
e-value: 2.1E-43
score: 150.6
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 11..198
IPR028671Syntaxin-2PANTHERPTHR19957:SF36SYNTAXIN-2coord: 11..198
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 152..201
score: 15.517
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 6..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77689contigH-elongata_contig77689:300..2595 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77689.15447.1mRNA_H-elongata_contig77689.15447.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77689 300..2595 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77689.15447.1 ID=prot_H-elongata_contig77689.15447.1|Name=mRNA_H-elongata_contig77689.15447.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=201bp
QACTDLDTLTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAM
REETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTA
VKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTH
VLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQVSTF
S
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006011Syntaxin_N
IPR028671STX2
IPR000727T_SNARE_dom
IPR010989SNARE