prot_H-elongata_contig77538.15435.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77538.15435.1
Unique Nameprot_H-elongata_contig77538.15435.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length215
Homology
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BLAST of mRNA_H-elongata_contig77538.15435.1 vs. uniprot
Match: A0A6H5JIG0_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG0_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 5.340e-49
Identity = 110/228 (48.25%), Postives = 129/228 (56.58%), Query Frame = 0 
Query:    1 QVWSICRRQHDFQKLHACLQRQFPAITLPRLPRPPSGGG--LLDPATLERTRAGLQSYAAGLVADVPAAWGLEEFVMFLDSDEKGRRLFGKKRKKDARKVMGRSSASEEQRSKLSRGTRERCFESEGDCSRGPGEEE-------HKVGTLPSFRIRPVC-LPRVEL--QTLLDVKVEEKKQAMAALEGAAQNHFEGVGAVVNNEVSFSDDEDFG----FDDDGEFIDG 212
            QVWS+CRR  DFQ LH+CLQ  FPA+ LPRLPRPP+GGG   L+PATLER RAGLQ+YAA +V  VPAAWGLEE VMFLDS+EKGRRLF                                                        K    P   + P    P V    ++LLD+KVEEKK A+AALEGAA NHF+GVGAV+N  VSFS+D D G    F ++ +FIDG
Sbjct:   40 QVWSVCRRYKDFQSLHSCLQATFPALVLPRLPRPPTGGGGMALEPATLERARAGLQAYAAAVVGSVPAAWGLEELVMFLDSEEKGRRLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKPVARKGAAFPPDLVSPKTGTPGVGFGQKSLLDLKVEEKKLALAALEGAAANHFDGVGAVMNAAVSFSEDSDDGASQEFGEESDFIDG 267
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BLAST of mRNA_H-elongata_contig77538.15435.1 vs. uniprot
Match: D7FV50_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV50_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 1.310e-45
Identity = 109/227 (48.02%), Postives = 128/227 (56.39%), Query Frame = 0 
Query:    1 QVWSICRRQHDFQKLHACLQRQFPAITLPRLPRPPSGGG--LLDPATLERTRAGLQSYAAGLVADVPAAWGLEEFVMFLDSDEKGRRLFGKKRKKDARKVMGRSSASEEQRSKLSRGTRERCFESEGDCSRGPGEEE------HKVGTLPSFRIRPVC-LPRVEL--QTLLDVKVEEKKQAMAALEGAAQNHFEGVGAVVNNEVSFSDDEDFG----FDDDGEFIDG 212
            QVWS+CRR  DFQ LH+CLQ  FPA+ LPRLPRPP+GGG   L+PATLER RAGLQ+YAA +V  VPAAWGLEE VMFLDS+EKGRRLF                                                       K    P   + P    P V    ++LLD+KVEEKK A+AALEGAA NHF+GVGAV+N  VSFS+D D      F ++ +FIDG
Sbjct:  508 QVWSVCRRYKDFQSLHSCLQATFPALVLPRLPRPPTGGGGMALEPATLERARAGLQAYAAAVVGSVPAAWGLEELVMFLDSEEKGRRLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKPVARKAAAFPPDLVSPKAGTPGVGFGQKSLLDLKVEEKKLALAALEGAAANHFDGVGAVMNAAVSFSEDSDDDASQEFGEESDFIDG 734
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77538.15435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIG0_9PHAE5.340e-4948.25PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FV50_ECTSI1.310e-4548.02PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 1..106
e-value: 3.6E-12
score: 48.1
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 2..81
IPR001683Phox homologous domainPFAMPF00787PXcoord: 3..78
e-value: 1.4E-9
score: 38.0
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 1..84
score: 12.231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77538contigH-elongata_contig77538:258..1340 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77538.15435.1mRNA_H-elongata_contig77538.15435.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77538 258..1340 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77538.15435.1 ID=prot_H-elongata_contig77538.15435.1|Name=mRNA_H-elongata_contig77538.15435.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=215bp
QVWSICRRQHDFQKLHACLQRQFPAITLPRLPRPPSGGGLLDPATLERTR
AGLQSYAAGLVADVPAAWGLEEFVMFLDSDEKGRRLFGKKRKKDARKVMG
RSSASEEQRSKLSRGTRERCFESEGDCSRGPGEEEHKVGTLPSFRIRPVC
LPRVELQTLLDVKVEEKKQAMAALEGAAQNHFEGVGAVVNNEVSFSDDED
FGFDDDGEFIDGGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf
IPR001683Phox