prot_H-elongata_contig77459.15427.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77459.15427.1
Unique Nameprot_H-elongata_contig77459.15427.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length45
Homology
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BLAST of mRNA_H-elongata_contig77459.15427.1 vs. uniprot
Match: D8LFT1_ECTSI (Cation efflux family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT1_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.480e-13
Identity = 37/44 (84.09%), Postives = 38/44 (86.36%), Query Frame = 0 
Query:    1 DKTSSRLAIFALLNFIYVVLQLTGAMAFGSLALLSDGFHNLSDV 44
            DK S RLAIF LLN  YVVLQL GAMAFGSLAL+SDGFHNLSDV
Sbjct:   75 DKMSGRLAIFGLLNLGYVVLQLAGAMAFGSLALMSDGFHNLSDV 118
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BLAST of mRNA_H-elongata_contig77459.15427.1 vs. uniprot
Match: A0A152A7S5_9MYCE (Putative zinc transporter n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A7S5_9MYCE)

HSP 1 Score: 48.1 bits (113), Expect = 3.920e-5
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 0 
Query:    1 DKTSSRLAIFALLNFIYVVLQLTGAMAFGSLALLSDGFHNLSDV 44
            +K S       LL F+YV+++L  A+  GSL LLSDGFHNLSDV
Sbjct:   26 NKKSIAFLSIGLLTFVYVLVELGAALYVGSLTLLSDGFHNLSDV 69
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77459.15427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFT1_ECTSI1.480e-1384.09Cation efflux family protein n=1 Tax=Ectocarpus si... [more]
A0A152A7S5_9MYCE3.920e-554.55Putative zinc transporter n=1 Tax=Tieghemostelium ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002524Cation efflux proteinPFAMPF01545Cation_effluxcoord: 8..44
e-value: 8.3E-7
score: 28.9
IPR027469Cation efflux transmembrane domain superfamilyGENE3D1.20.1510.10coord: 4..44
e-value: 3.9E-6
score: 28.6
IPR027469Cation efflux transmembrane domain superfamilySUPERFAMILY161111Cation efflux protein transmembrane domain-likecoord: 4..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..44
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77459contigH-elongata_contig77459:2105..2239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77459.15427.1mRNA_H-elongata_contig77459.15427.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77459 2105..2239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77459.15427.1 ID=prot_H-elongata_contig77459.15427.1|Name=mRNA_H-elongata_contig77459.15427.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=45bp
DKTSSRLAIFALLNFIYVVLQLTGAMAFGSLALLSDGFHNLSDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002524Cation_efflux
IPR027469Cation_efflux_TMD_sf