prot_H-elongata_contig77291.15405.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77291.15405.1
Unique Nameprot_H-elongata_contig77291.15405.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length367
Homology
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BLAST of mRNA_H-elongata_contig77291.15405.1 vs. uniprot
Match: D7G702_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G702_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 8.640e-43
Identity = 135/307 (43.97%), Postives = 170/307 (55.37%), Query Frame = 0 
Query:   64 IEMTNAR-EDIEQIEHHILSPTDRPRGETLDSMLDADAGAKRISLELPAMDDGSNFEDEFDPILAVIRKSQQKDATANAASFRAGASGTTTSQAQSFPVRGDEEGVTPLSSPPPDKDASETHRGSPRTRTAFAAGFLSILPGSMRARAGDVMAHSSAQISRSATAFRSALEKGGAP-SALDSRKRRHPD-PLRAPDG-TAELEEGMVGKGVSGGRRAAGGGEVDGVRLVSADELLSEEERQQLAAFSELTGGSTVGA-CAWRRLRKGMIVVVAIALVGLPFYLWRWMTIALAVTEEGNAVTAIGADR 365
            IE+   R ED  ++  H   P+  PRG T +    +  G +  S+E    D G NFEDEFDPILA IRK QQ  A+  AA+      G            G E G          ++A++   G P T ++ AAGFLS+LPG MRA+AG+VMA SSA+IS SA AFRSAL  GGA  SA D  KRR  D   R  DG   ELEEG               G+ D VRL++ +E+LSEEERQQLA+F+   GG+  G  C WRRLRK + V V I L+GL  YLWRW T+ L   +  N V  +G++R
Sbjct:   92 IEIPQLRQEDNAELRSH---PS--PRGSTSEH---SSFGDRFASME----DGGVNFEDEFDPILASIRKPQQPPASTTAAASSMSPRGRXXXXXXXXXPSGRERG----------REANDA--GRPTTGSSLAAGFLSMLPGDMRAKAGEVMAQSSARISESANAFRSALGPGGAAQSATDKSKRRQSDHTCRGVDGGDHELEEGR--------------GDEDDVRLMNVNEVLSEEERQQLASFA---GGAGAGRFCGWRRLRKYVPVFVGIGLLGL-LYLWRWTTL-LVGKDTANEVKVLGSER 355
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77291.15405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G702_ECTSI8.640e-4343.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 343..366
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 325..342
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..324
NoneNo IPR availableTMHMMTMhelixcoord: 325..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77291contigH-elongata_contig77291:437..2440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77291.15405.1mRNA_H-elongata_contig77291.15405.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77291 437..2440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77291.15405.1 ID=prot_H-elongata_contig77291.15405.1|Name=mRNA_H-elongata_contig77291.15405.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=367bp
LKRLREEQERSERSKEESIRLLRASESSVDSSGARSGVRADDAGFANNLR
GKRSGGDGACLAGIEMTNAREDIEQIEHHILSPTDRPRGETLDSMLDADA
GAKRISLELPAMDDGSNFEDEFDPILAVIRKSQQKDATANAASFRAGASG
TTTSQAQSFPVRGDEEGVTPLSSPPPDKDASETHRGSPRTRTAFAAGFLS
ILPGSMRARAGDVMAHSSAQISRSATAFRSALEKGGAPSALDSRKRRHPD
PLRAPDGTAELEEGMVGKGVSGGRRAAGGGEVDGVRLVSADELLSEEERQ
QLAAFSELTGGSTVGACAWRRLRKGMIVVVAIALVGLPFYLWRWMTIALA
VTEEGNAVTAIGADRA*
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