prot_H-elongata_contig7728.15404.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7728.15404.1
Unique Nameprot_H-elongata_contig7728.15404.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length221
Homology
BLAST of mRNA_H-elongata_contig7728.15404.1 vs. uniprot
Match: D7G6Y8_ECTSI (UBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y8_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 7.590e-108
Identity = 160/212 (75.47%), Postives = 186/212 (87.74%), Query Frame = 0
Query:    1 MKMLELAVERLETGTYMTPDEKYRNIRVVPHLLWLLDGNKDAAGSDGASSFNVFKQRKSKLQPVQRICQKFPVVPQCGDVAIKLSYILERCPHFDSDSSSSWFSDTPAAPDYGMLAKWGRMTTDFDEYATKLSNAMNEIRTGPFVKSASSVKVAAKVARLVLTGLRLLQRWSCVVLECMAWKYTHPCSPSVFREKGGDPSGKGMEYERVVRY 212
            MKML LAVERLET  YMTPDEKYRNIRVVPHLLWLLDG+  AAG DG  S+NVFKQRK KLQP+QRICQ++PVVPQCGD+AIKLSY+LERCPHFD+DSS +WF+D  AA DY ++AKWG+MT DFDEY T+LS  +NEI TGPFVK+ ++V++AA+V+RLV+ GLRLLQRWSCVVLECMAWK+THPCS + F+  GGDP GKGMEYERVVRY
Sbjct:  243 MKMLSLAVERLETNRYMTPDEKYRNIRVVPHLLWLLDGDVGAAGPDG--SYNVFKQRKIKLQPLQRICQRYPVVPQCGDIAIKLSYVLERCPHFDADSSGAWFADAAAAQDYSVMAKWGKMTRDFDEYTTRLSIFLNEIGTGPFVKTPTNVRIAARVSRLVMVGLRLLQRWSCVVLECMAWKHTHPCSQAAFKRAGGDPMGKGMEYERVVRY 452          
BLAST of mRNA_H-elongata_contig7728.15404.1 vs. uniprot
Match: A0A6H5KQX8_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX8_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 8.410e-72
Identity = 124/212 (58.49%), Postives = 142/212 (66.98%), Query Frame = 0
Query:    1 MKMLELAVERLETGTYMTPDEKYRNIRVVPHLLWLLDGNKDAAGSDGASSFNVFKQRKSKLQPVQRICQKFPVVPQCGDVAIKLSYILERCPHFDSDSSSSWFSDTPAAPDYGMLAKWGRMTTDFDEYATKLSNAMNEIRTGPFVKSASSVKVAAKVARLVLTGLRLLQRWSCVVLECMAWKYTHPCSPSVFREKGGDPSGKGMEYERVVRY 212
            MKML LAVERLET  YMTPDEKYRNIRVVPHLLWLLDG+  AAG DG  S+NVFKQRK KLQP+QRICQ++PVVPQCGD+AIKLSY+LERCPHFD+DSS +WF+D  AA DY ++AKWG+MT DFDEY T+LS ++NEI T                                                + F+  GGDP GKGMEYERVVRY
Sbjct:    1 MKMLSLAVERLETNRYMTPDEKYRNIRVVPHLLWLLDGDVGAAGPDG--SYNVFKQRKIKLQPLQRICQRYPVVPQCGDIAIKLSYVLERCPHFDADSSGAWFADAAAAQDYSVMAKWGKMTKDFDEYTTRLSISLNEIGT------------------------------------------------AAFKRAGGDPMGKGMEYERVVRY 162          
BLAST of mRNA_H-elongata_contig7728.15404.1 vs. uniprot
Match: A0A8J2T1L4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1L4_9STRA)

HSP 1 Score: 155 bits (392), Expect = 7.060e-40
Identity = 80/214 (37.38%), Postives = 121/214 (56.54%), Query Frame = 0
Query:    3 MLELAVERLETGTYMTPDEKYRNIRVVPHLLWLLDGNKDAAGSDGASSFNVFKQRKSKLQPVQRICQKFPVVPQCGDVAIKLSYILERCPHFDSDSSSSWF--SDTPAAPDYGMLAKWGRMTTDFDEYATKLSNAMNEIRTGPFVKSASSVKVAAKVARLVLTGLRLLQRWSCVVLECMAWKYTHPCSPSVFR--EKGGDPSGKGMEYERVVRY 212
            +L+  VE +E G Y+  DEKYR +R +P L+ L+DG+      D   S NVFK R+  L P+Q I + +PVVP+CGD+++ +  IL+R PH+D+    SW   +D      Y + ++W R+     EY   L+  + E+ T  F K  ++ K AA V+++V  G +LLQ W+C VLE   WK THPC+ ++    +K  D       YE  +RY
Sbjct:  251 ILQQNVEFIENGRYVLLDEKYRLVRSLPRLMLLIDGDL----GDSVKSVNVFKDRRISLTPLQSIFRAYPVVPECGDMSMTMLIILQRSPHWDASMEISWGGNADRRIVAHYSLPSQWSRIKLQHQEYMPYLAQTLTEVATYLFKKDTATAKYAAFVSKMVFDGFKLLQSWTCAVLESYHWKLTHPCAAAIITKLDKQSD-----HPYELAIRY 455          
BLAST of mRNA_H-elongata_contig7728.15404.1 vs. uniprot
Match: F0YL26_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL26_AURAN)

HSP 1 Score: 150 bits (379), Expect = 3.900e-38
Identity = 73/191 (38.22%), Postives = 112/191 (58.64%), Query Frame = 0
Query:    1 MKMLELAVERLETGTYMTPDEKYRNIRVVPHLLWLLDGNKDAAGSD---GASSFNVFKQRKSKLQPVQRICQKFPVVPQCGDVAIKLSYILERCPHFDSDSSSSWFS--DTPAAPDYGMLAKWGRMTTDFDEYATKLSNAMNEIRTGPFVKSASSVKVAAKVARLVLTGLRLLQRWSCVVLECMAWKYTHP 186
            ++ML+  V+ +E   +M PDEKYR IR +PHL+ L+DG+ +  G     G    NVFK ++ +L P+Q I + +PVVP+ GD+++ +  IL+R PH+DS    SW S  D      Y +L  W  + +   EY +K S    E+    F K+ ++ K A  +++L++ G +LLQ W+C VLE   WK THP
Sbjct:  244 IEMLQQNVDFIENERHMMPDEKYRLIRSLPHLMLLIDGDVEEPGQSSGAGGKVMNVFKDKRIRLAPLQAIFKSYPVVPEYGDMSMTMLVILKRAPHWDSSMEKSWGSEPDRKVVSRYSLLTHWSEIKSHHAEYLSKFSKTTIELAAYDFKKALTATKYATFISKLIVDGFKLLQSWTCKVLEAYHWKLTHP 434          
BLAST of mRNA_H-elongata_contig7728.15404.1 vs. uniprot
Match: A0A7S1U2Y5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2Y5_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.690e-37
Identity = 81/232 (34.91%), Postives = 129/232 (55.60%), Query Frame = 0
Query:    6 LAVERLETGTYMTPDEKYRNIRVVPHLLWLLDGNKDAAGSDGASSFNVFKQRKS----KLQPVQRICQKFPVVPQCGDVAIKLSYILERCPHFDSDSSSSW--FSDTPAAPDYGMLAKWGRMTTDFDEYATKLSNAMNEIRTGPFVKSAS--SVKVAAKVARLVLTGLRLLQRWSCVVLECMAWKYTHPCSPSVFREKGGD--PSGK-----------GMEYERVVRYGTVQ 216
            L+++  E+  Y+TPDE+YR +RV+PH++ L+DG+    GSD  + +NVFK +      + + VQ++ +++P VP  GD+A     IL+RC +++ +    W    D   A  Y +  +W  + +D+D Y    +N MNE+    F KS+   +++ A +VAR V+TG R L RW+C+++E  AWK  HP +    R K  +  P  K           G EYERVVRY   +
Sbjct:  225 LSMDDEESERYLTPDERYRFVRVIPHIMQLMDGS----GSD--NEYNVFKNKYKIKNFRQKDVQKVLKRYPFVPLYGDMASDTLVILKRCKNWNPEMEPLWSRVGDRKTAEAYDLRTRWRAVRSDYDHYIAVFANTMNEVNGFHFRKSSDRGAIEYAGRVARTVMTGFRYLMRWTCMIMESSAWKLKHPINDDNLRNKLMELYPPEKVEEMMTALCQQGSEYERVVRYNYAK 450          
BLAST of mRNA_H-elongata_contig7728.15404.1 vs. uniprot
Match: A0A7S2S8A9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8A9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 9.590e-16
Identity = 36/106 (33.96%), Postives = 62/106 (58.49%), Query Frame = 0
Query:   50 SFNVFKQRKSKLQPVQRICQKFPVVPQCGDVAIKLSYILERCPHFDSDS-SSSWFSDTP---AAPDYGMLAKWGRMTTDFDEYATKLSNAMNEIRTGPFVKSASSV 151
            +FNVFKQ+K KL PV+++ +++P++P  GD+ I+   IL+R PH+D+ S +S W    P       Y +   W  +   +DE   +L  A+N ++   F K+ ++V
Sbjct:    3 NFNVFKQKKVKLDPVKKLLKQYPILPMYGDMPIRAEVILQRAPHYDASSMASQWGGGEPDRRVVAQYSLATSWKAVRRQYDELMNRLVLALNTLKRRDFAKNMATV 108          
BLAST of mRNA_H-elongata_contig7728.15404.1 vs. uniprot
Match: A0A5D6XLW6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLW6_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.620e-9
Identity = 47/205 (22.93%), Postives = 93/205 (45.37%), Query Frame = 0
Query:    8 VERLETGTYMTPDEKYRNIRVVPHLLWLLDGNKDAAGSDGASSFNVFKQRKSKLQPVQRICQKFPVVPQCGDVAIKLSYILERCPHFDSDSSSSWFSDTPAAPDYGMLAKWGRMTTDFDEYATKLSNAMNEIRTGPFVKSASSVKVAAKVARLVLTGLRLLQRWSCVVLECMAWKYTHPCSPSVFREKGGDPSGKGMEYERVVRY 212
            +  +E    +TP+++++ IRV+P LL +L+ ++ +A ++G     +    K  ++   ++ Q++PVVP  G+++       +       D +S+       A  + +LA   +M +    +  +L + +N    G       S++  A +  +VL  L  L  W   +L  +A K+  P S    +  G       +EYER  RY
Sbjct:  276 LSHIEDDICLTPEQRFKYIRVLPSLLVVLEESRQSAKANG-----IRAMEKKAMEAAAKVLQRYPVVPMLGELSAMRIGAFQTASGGKKDGASAEHEKQIDAA-FDLLAVSAKMKSVCGGFLPRLVHVVNAHPRGD-----GSLEQNAALYSVVLEALGHLSEWKSSLLLFVALKFQFPASNDALQRGGACLDSPYLEYERATRY 469          
BLAST of mRNA_H-elongata_contig7728.15404.1 vs. uniprot
Match: A0A0K9PEB5_ZOSMR (Uncharacterized protein (Fragment) n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PEB5_ZOSMR)

HSP 1 Score: 59.3 bits (142), Expect = 9.050e-7
Identity = 55/228 (24.12%), Postives = 103/228 (45.18%), Query Frame = 0
Query:    3 MLELAVERLETGTYMTPDEKYRNIRVVPHLLWLLDGNKDAAGSDGASSFNVFKQRKSKLQPVQRICQKFPVVPQCGDVAIKLSYILERC----PHFDSDS-----------SSSWFSDTPAAPDYGMLAKWGRMTTDFDEYATKLSNAMNEI---RTGPFVKSASSVKVAAKVARLVLTGLRLLQRWSCVVLECMAWKYTHPCSPSVFREKGGDPSGKGMEYERVVRY 212
            ++   VE LE    +   E++  +RV+P L+ L       A S      +++K  K K+  +  I +  PV+P   D+ +  + I++      P+F + +           +S    D      Y ++   G +  + D++  + ++A N+I   ++        S +V   +  +V+ GL LL RW+ +V E  AWK++ PC  +      G+ S    +YE+VVRY
Sbjct:   30 LIIFCVESLEIDFALLFSERHLLLRVLPVLVVL-------ATSSEKDCESLYK--KVKINRLLTIFKNDPVIPAFPDLHLSPAVIMKELSVSFPYFSAQTRLLSLLAPHEITSRELLDYQRR--YLIINHIGNIRAEHDDFVVRFASAKNKIVLLKSTDVADIEWSKEVKGTMYNMVVEGLELLSRWTGLVWEQSAWKFSRPCKDADSMASLGN-STTFFDYEKVVRY 245          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7728.15404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G6Y8_ECTSI7.590e-10875.47UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KQX8_9PHAE8.410e-7258.49UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8J2T1L4_9STRA7.060e-4037.38Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YL26_AURAN3.900e-3838.22Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1U2Y5_9STRA2.690e-3734.91Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2S8A9_9STRA9.590e-1633.96Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A5D6XLW6_9STRA1.620e-922.93Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0K9PEB5_ZOSMR9.050e-724.12Uncharacterized protein (Fragment) n=1 Tax=Zostera... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008081Cytoplasmic FMR1-interactingPFAMPF05994FragX_IPcoord: 157..213
e-value: 2.7E-8
score: 32.4
IPR008081Cytoplasmic FMR1-interactingPIRSFPIRSF008153CYFIPcoord: 1..217
e-value: 1.1E-35
score: 120.6
IPR008081Cytoplasmic FMR1-interactingPANTHERPTHR12195P53 INDUCIBLE PROTEIN-RELATEDcoord: 3..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7728contigH-elongata_contig7728:7041..9485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7728.15404.1mRNA_H-elongata_contig7728.15404.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7728 1313..9485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7728.15404.1 ID=prot_H-elongata_contig7728.15404.1|Name=mRNA_H-elongata_contig7728.15404.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=221bp
MKMLELAVERLETGTYMTPDEKYRNIRVVPHLLWLLDGNKDAAGSDGASS
FNVFKQRKSKLQPVQRICQKFPVVPQCGDVAIKLSYILERCPHFDSDSSS
SWFSDTPAAPDYGMLAKWGRMTTDFDEYATKLSNAMNEIRTGPFVKSASS
VKVAAKVARLVLTGLRLLQRWSCVVLECMAWKYTHPCSPSVFREKGGDPS
GKGMEYERVVRYGTVQLVRQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008081Cytoplasmic_FMR1-int