prot_H-elongata_contig77250.15399.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77250.15399.1
Unique Nameprot_H-elongata_contig77250.15399.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length119
Homology
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BLAST of mRNA_H-elongata_contig77250.15399.1 vs. uniprot
Match: D8LT96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT96_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 3.430e-51
Identity = 90/120 (75.00%), Postives = 98/120 (81.67%), Query Frame = 0 
Query:    1 LVGVAINGLPLAETPVVEIYGPTQLLYSSIDGEEGNQ-LWNEDQGFFKVTCALSGDFVVIVRFKGRAGGAAAGPEGVLFRYYNHTCFLPVGDQVNLSKSKVDVMPSYRGQIPDDKFSLSL 119
            LVGVA+NGLPLAE PV+E+YGPTQLLYSS   EE +  LWNEDQGFFKV   L+GDFVVI RFKG  G A  GPEGVLFRY NHTCFLP G+QV L KS+VDVMPSYR QIPDD FS+SL
Sbjct:  240 LVGVALNGLPLAEPPVLEVYGPTQLLYSSTQEEEDSHVLWNEDQGFFKVNKPLTGDFVVIARFKGTDGAAETGPEGVLFRYCNHTCFLPQGEQVVLRKSEVDVMPSYRDQIPDDVFSVSL 359
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BLAST of mRNA_H-elongata_contig77250.15399.1 vs. uniprot
Match: A0A6H5JR06_9PHAE (FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR06_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.860e-49
Identity = 90/120 (75.00%), Postives = 98/120 (81.67%), Query Frame = 0 
Query:    1 LVGVAINGLPLAETPVVEIYGPTQLLYSSIDGEEGNQ-LWNEDQGFFKVTCALSGDFVVIVRFKGRAGGAAAGPEGVLFRYYNHTCFLPVGDQVNLSKSKVDVMPSYRGQIPDDKFSLSL 119
            LVGVA+NGLPLAE PV+E+YGPTQLLYSS   EE +  LWNEDQGFFKV   L+GDFVVI RFKG  G A  GPEGVLFRY NHTCFLP G+QV L KS+VDVMPSYR QIPDD FS+SL
Sbjct:  240 LVGVALNGLPLAEPPVLEVYGPTQLLYSSTQEEEDSHVLWNEDQGFFKVNKPLTGDFVVIARFKGTDGAAETGPEGVLFRYCNHTCFLPQGEQVVLRKSEVDVMPSYRDQIPDDVFSVSL 359
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77250.15399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT96_ECTSI3.430e-5175.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR06_9PHAE1.860e-4975.00FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.1110coord: 1..119
e-value: 2.1E-8
score: 35.6
IPR014020Tensin phosphatase, C2 domainPROSITEPS51182C2_TENSINcoord: 1..119
score: 11.056

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77250contigH-elongata_contig77250:339..1549 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77250.15399.1mRNA_H-elongata_contig77250.15399.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77250 339..1549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77250.15399.1 ID=prot_H-elongata_contig77250.15399.1|Name=mRNA_H-elongata_contig77250.15399.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
LVGVAINGLPLAETPVVEIYGPTQLLYSSIDGEEGNQLWNEDQGFFKVTC
ALSGDFVVIVRFKGRAGGAAAGPEGVLFRYYNHTCFLPVGDQVNLSKSKV
DVMPSYRGQIPDDKFSLSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014020Tensin_C2-dom