prot_H-elongata_contig7713.15386.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7713.15386.1
Unique Nameprot_H-elongata_contig7713.15386.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length439
Homology
[Close]
BLAST of mRNA_H-elongata_contig7713.15386.1 vs. uniprot
Match: A0A6H5J884_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J884_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 4.560e-119
Identity = 199/349 (57.02%), Postives = 259/349 (74.21%), Query Frame = 0 
Query:   37 DGGSRRASCSGEPDRRAGVRRKRDIIDPVSPCAKFNSLQWRMSYASRKEECNALDSCVFIGRAITGACASRDPSLLLRRGSSKNLPNVPLVLPEKDAEERK--AALQRHHAAKKMEETIDELETEFQKE-----KDEQLAARRFQELMDPLDVEEATQERALAILREEGMAALQVFVQSQLANAAAEELRCQKASTKAFAKDFLIQVLQNEELPGHFGKMLRVIFQDPSLATGVRQLIYAAISLDHTFTNSFQLTRNLVTWLLTGTDWMDEQALGLCVYLVGLPETELAASWLVAWAISKPGILDLPASKAVAQSLPLGSQEVTKALTTACASALQSEWAQELAKATTL 378
            DGGSRR       + R    R  +  +PV+PCA+FN+L+WRMSYA RK +CN  DSCVF+GR++TGAC  RDPS+L +R   ++ PNVPLVLP+ D   +K  AALQR H AK M ETIDELE+EF+ +      D +LAA +F+ELM  LDVEE+TQE ALAIL+EEGM A+QVFV+SQLANAAAEELR QK++T+AFAKDFL++V++  ELPG  G ML  +F+DP+L+TG+R LIY A+ LD+T+ +S  LT  L+ WLL+ TDWMD +A  LC YLV L +TELA   LVAWAI +PGILD  +S+ +A SLPLGSQ++T ++  A    L+S+WA E+AK+TT+
Sbjct:   41 DGGSRRRG-----NNRRVRERSEEEAEPVNPCAEFNTLKWRMSYAHRKNDCNGEDSCVFVGRSVTGACVPRDPSILHKR---RSFPNVPLVLPDSDGSTKKLQAALQRQHTAKVMSETIDELESEFEHKGVEPYSDTKLAANKFRELMSALDVEESTQELALAILQEEGMHAVQVFVKSQLANAAAEELRYQKSATEAFAKDFLMEVIREPELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLDYTYQSSLTLTIPLIRWLLSETDWMDAEAAKLCAYLVRLEQTELATILLVAWAIREPGILDPSSSRGLAASLPLGSQQITDSMVWALTETLKSDWALEMAKSTTV 381
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7713.15386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J884_9PHAE4.560e-11957.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 146..166
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..21
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7713contigH-elongata_contig7713:2045..8688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7713.15386.1mRNA_H-elongata_contig7713.15386.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7713 2005..10262 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7713.15386.1 ID=prot_H-elongata_contig7713.15386.1|Name=mRNA_H-elongata_contig7713.15386.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=439bp
MNSTRCFYANTAGYMPSAAACAMVTLCCGIVSDVKGDGGSRRASCSGEPD
RRAGVRRKRDIIDPVSPCAKFNSLQWRMSYASRKEECNALDSCVFIGRAI
TGACASRDPSLLLRRGSSKNLPNVPLVLPEKDAEERKAALQRHHAAKKME
ETIDELETEFQKEKDEQLAARRFQELMDPLDVEEATQERALAILREEGMA
ALQVFVQSQLANAAAEELRCQKASTKAFAKDFLIQVLQNEELPGHFGKML
RVIFQDPSLATGVRQLIYAAISLDHTFTNSFQLTRNLVTWLLTGTDWMDE
QALGLCVYLVGLPETELAASWLVAWAISKPGILDLPASKAVAQSLPLGSQ
EVTKALTTACASALQSEWAQELAKATTLTALDMLQRSANKNGTKQSHPTE
AFHVATEGDEAEDRPPSATDVVRPQQDSLGGNEAGRRL*
back to top