prot_H-elongata_contig77024.15377.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77024.15377.1
Unique Nameprot_H-elongata_contig77024.15377.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length195
Homology
BLAST of mRNA_H-elongata_contig77024.15377.1 vs. uniprot
Match: A0A6H5JZ55_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ55_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 1.960e-56
Identity = 110/204 (53.92%), Postives = 141/204 (69.12%), Query Frame = 0
Query:   14 VKLCRAQSLKRAQLLGKQDPYVRARLYYQGQQIGECRSSTCRDGGRNPTWQVASKSVFTFYVPATVTLDRLALTLDVVNENMIADNFIGTTGSIRLDQAADGRDRWWNISTGGSLQAIIELVSNDTHGAGAVGNN-----SRSGTAAA----------------GRANVGSPSPHAAVVSARPASVPAPG-AYGTASPVSYAQT 195
            V++C+AQ+LK+ Q++GKQDPYVRA+L + G +IGECRSST  DGGRNPTWQ  +KSVFTFYVPATVTLD LA+ LDVVN+N++AD+ IGTTGSI L  AA G  +WWNIS+GG++QAIIEL++ ++ G G  G +     SR+  AAA                GR    +P PH AV  A P +  APG AYG A+P + A +
Sbjct:  190 VRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMAKSVFTFYVPATVTLDTLAVVLDVVNDNLVADSIIGTTGSIGLQTAATGESKWWNISSGGTIQAIIELITPESGGGGGTGTHPNTAYSRNSAAAADPAVASSRPSGGSYGGGRVATVNPPPHVAVAHATPVAAGAPGNAYGGAAPGAMAMS 393          
BLAST of mRNA_H-elongata_contig77024.15377.1 vs. uniprot
Match: D8LMN7_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN7_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 2.650e-54
Identity = 107/204 (52.45%), Postives = 141/204 (69.12%), Query Frame = 0
Query:   14 VKLCRAQSLKRAQLLGKQDPYVRARLYYQGQQIGECRSSTCRDGGRNPTWQVASKSVFTFYVPATVTLDRLALTLDVVNENMIADNFIGTTGSIRLDQAADGRDRWWNISTGGSLQAIIELVSNDTHGAG--------------------AVGNNSRSGTAA-AGRANVGSPSPHAAVVSARPASVPAPG-AYGTASPVSYAQT 195
            V++C+AQ+LK+ Q++GKQDPYVRA+L + G +IGECRSST  DGGRNPTWQ  ++SVFTFYVPATVTL+ LA+ LDVVN+N++AD+ IGTTGSI L  AA G  +WWN+S+GG+LQAIIEL++ ++ G                      AV ++  SG +   GR    +PSPH AV  A P +  APG AYG A+PV+ A +
Sbjct:  172 VRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMARSVFTFYVPATVTLETLAVVLDVVNDNLVADSIIGTTGSIGLKTAATGESKWWNVSSGGTLQAIIELITPESGGXXXXXTHPNIAYSRSXXXXXXPAVASSRPSGGSYNGGRVATVNPSPHVAVAHATPVAAGAPGNAYGGATPVATAMS 375          
BLAST of mRNA_H-elongata_contig77024.15377.1 vs. uniprot
Match: D7G451_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G451_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 2.240e-24
Identity = 56/120 (46.67%), Postives = 76/120 (63.33%), Query Frame = 0
Query:   14 VKLCRAQSLKRAQLLGKQDPYVRARLYYQGQQIGECRSSTCRDGGRNPTWQVASKSVFTFYVPATVTLDRLALTLDVVNEN-MIADNFIGTTGSIRLDQAADGRDRWWNISTGGSLQAII 132
            V +  AQ+LK    +  QDPYV+A+L   G QI E +S T  +GGRNP+W     + FTFYVP+ V L +LA+ L++ + N M AD  IGT G I L   ADG+ RWW +++GG LQA +
Sbjct:  166 VNVACAQNLKSVSTMSTQDPYVKAKLLVDGYQISEVKSGTHNNGGRNPSW-ARRNNFFTFYVPSNVPLRKLAVVLEIYDYNTMSADKMIGTCGKIPLQGIADGKMRWWTVTSGGQLQASV 284          
BLAST of mRNA_H-elongata_contig77024.15377.1 vs. uniprot
Match: A0A6H5L4D8_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D8_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 6.040e-24
Identity = 55/120 (45.83%), Postives = 76/120 (63.33%), Query Frame = 0
Query:   14 VKLCRAQSLKRAQLLGKQDPYVRARLYYQGQQIGECRSSTCRDGGRNPTWQVASKSVFTFYVPATVTLDRLALTLDVVNEN-MIADNFIGTTGSIRLDQAADGRDRWWNISTGGSLQAII 132
            V +  AQ+LK    +  QDPYV+A+L   G Q+ E +S T  +GGRNP+W     + FTFYVP+ V L +LA+ L++ + N M AD  IGT G I L   ADG+ RWW +++GG LQA +
Sbjct:  143 VNVACAQNLKSVSTMSTQDPYVKAKLLVDGYQVSEVKSGTHNNGGRNPSW-AGRNNFFTFYVPSNVPLRKLAVVLEIYDYNTMSADKMIGTCGKIPLQGIADGKMRWWTVTSGGQLQASV 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77024.15377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JZ55_9PHAE1.960e-5653.92C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LMN7_ECTSI2.650e-5452.45C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
D7G451_ECTSI2.240e-2446.67C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5L4D8_9PHAE6.040e-2445.83C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 9..136
e-value: 5.5E-12
score: 47.6
IPR000008C2 domainPFAMPF00168C2coord: 13..111
e-value: 2.5E-7
score: 30.9
IPR000008C2 domainPROSITEPS50004C2coord: 14..105
score: 10.308
NoneNo IPR availablePANTHERPTHR47052FAMILY NOT NAMEDcoord: 13..190
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 13..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77024contigH-elongata_contig77024:742..2482 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77024.15377.1mRNA_H-elongata_contig77024.15377.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77024 742..2482 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77024.15377.1 ID=prot_H-elongata_contig77024.15377.1|Name=mRNA_H-elongata_contig77024.15377.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp
MTSRRWQPLAAKQVKLCRAQSLKRAQLLGKQDPYVRARLYYQGQQIGECR
SSTCRDGGRNPTWQVASKSVFTFYVPATVTLDRLALTLDVVNENMIADNF
IGTTGSIRLDQAADGRDRWWNISTGGSLQAIIELVSNDTHGAGAVGNNSR
SGTAAAGRANVGSPSPHAAVVSARPASVPAPGAYGTASPVSYAQT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom