prot_H-elongata_contig767.15338.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig767.15338.1
Unique Nameprot_H-elongata_contig767.15338.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length238
Homology
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5KAQ6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ6_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 4.700e-44
Identity = 98/240 (40.83%), Postives = 132/240 (55.00%), Query Frame = 0
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 238
            +G L  L+K  L E+L  +V+  +F  +PK V AC G+ + L L D    P+ A  R  SPE+R MI+ E+ +L   G I  + S  AA C  V+K DGT+R+  D+R LN  L + SGGLGD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG L+++ R  FGL  +PSAF   +      V   G+ +WLD I + + T   H   L      LR   L VN  K
Sbjct:  126 MGQLGALQKQELVEVLATFVEEGLFPIDPKRVAACGGSELELPLIDEFCTPHAAKQRRFSPEERRMIRAEIQQLLDRGIIRPSMSPWAAQCLCVKKKDGTMRLCIDWRVLNKLLVADSGGLGDMQTIFDGLKGKRYFTQIDLASGFHQIEIAEKDRYKTAFRDADGMLYEFTRAAFGLTVLPSAFTRRVKSALGIV--DGVFSWLDDILVANETWEEHLAALVLVLTRLRAAGLSVNFPK 363          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 4.780e-42
Identity = 98/240 (40.83%), Postives = 131/240 (54.58%), Query Frame = 0
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 238
            +G L  L+K  L E+L  +V+  +F  +PK V AC G  + L L D    P+ A  R  SPE+R MI+ E+ +L   G I  + S  AA C  V+K DGT+R+  D+R LN  L + SGGLGD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG L+++ R  FGL  +PSAF   +      V   G+ +WLD I + + T   H   L      LR   L VN  K
Sbjct:  268 MGQLGALQKQELVEVLATFVEEGLFPIDPKRVAACGGTELELPLIDEFCTPHAAKQRRFSPEERRMIRAEIQQLLDRGIIRPSMSPWAAQCLCVKKKDGTMRLCIDWRVLNKLLVADSGGLGDMQTIFDGLKGKRYFTQIDLASGFHQIEIAEKDRYKTAFRDADGMLYEFTRAGFGLTVLPSAFTRRVKSALGIV--DGVFSWLDDILVANETWEEHLAALVLVLTRLRAAGLSVNFPK 505          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 5.680e-42
Identity = 95/240 (39.58%), Postives = 130/240 (54.17%), Query Frame = 0
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 238
            +G L  L+K  L  +L  +++  +F  +PK VPAC    + L L +    P+ A  R  SPE+R MI+ E+ +L   G I ++ S  AA C  V+K DGT+R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  +P+AF   +      +   G+ +WLD I I S +   H   L      L    L VN  K
Sbjct:  106 LGTLGSLKKHQLVNVLAAFIEDGLFPIDPKRVPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAK 343          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.590e-41
Identity = 95/240 (39.58%), Postives = 130/240 (54.17%), Query Frame = 0
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 238
            +G L  L+K  L  +L  +++  +F  +PK VPAC    + L L +    P+ A  R  SPE+R MI+ E+ +L   G I ++ S  AA C  V+K DGT+R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  +P+AF   +      +   G+ +WLD I I S +   H   L      L    L VN  K
Sbjct:  108 LGTLGSLKKHQLVNVLAAFIEDGLFPIDPKRVPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAK 345          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.760e-41
Identity = 95/240 (39.58%), Postives = 130/240 (54.17%), Query Frame = 0
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 238
            +G L  L+K  L  +L  +++  +F  +PK VPAC    + L L +    P+ A  R  SPE+R MI+ E+ +L   G I ++ S  AA C  V+K DGT+R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  +P+AF   +      +   G+ +WLD I I S +   H   L      L    L VN  K
Sbjct:  630 LGTLGSLKKHQLVNVLAAFIEDGLFPIDPKRVPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAK 867          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5L7W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W0_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 2.660e-40
Identity = 81/185 (43.78%), Postives = 110/185 (59.46%), Query Frame = 0
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAF 183
            +G L  L+K  L  +L  +++  +F  +PK VPAC    + L L +    P+ A  R  SPE+R MI+ E+ +L   G I ++ S  AA C  V+K DGT+R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+EI    R  TAFRDADG LW++ R  FGL  +P+AF
Sbjct:   55 LGTLGSLKKHQLVNVLAAFIEDGLFPIDPKRVPACINGELELPLINEFCTPFAAKQRRVSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKYRSKTAFRDADGMLWEFTRAGFGLTVLPAAF 239          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5KGF2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF2_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 7.270e-40
Identity = 88/218 (40.37%), Postives = 124/218 (56.88%), Query Frame = 0
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGH 216
            +G L  L+K  +  +L  +++  +F  +PK VPAC    + L L +    P+ A  R  SPE+R MI+ E+ +L   G I ++ SA AA C  V+K DGT+R+  D+R LN  L S SGGL D+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  +P+AF   +      +   G+ +WLD I I S +   H
Sbjct:   31 LGTLGSLKKRQVVNVLAAFIEDGLFPIDPKRVPACINGELELPLINEFCTPFAAKQRRLSPEERRMIRAEIQQLVDRGVIRQSMSAWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLADMQTIFDGLKGKKYFTQVDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWQEH 246          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5J659_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J659_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 2.260e-39
Identity = 87/210 (41.43%), Postives = 120/210 (57.14%), Query Frame = 0
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAI 208
            +G L  L+K  L  +L  +++  +F  +PK VPAC    + L L +    P+ A  R  SPE+R MI+ E+ +L   G I +  S  AA CS V+K DGT+R+  D+R LN  L S SGGLGD+  I D +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  +P+AF   +      +   G+ +WLD I I
Sbjct:  159 LGTLGSLKKHQLVNVLAAFIEDGLFPIDPKRVPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQPMSLWAAQCSCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTILDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILI 366          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5L7I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7I8_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 7.460e-38
Identity = 90/240 (37.50%), Postives = 125/240 (52.08%), Query Frame = 0
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 238
            +G    L+K  L  +L  +++  +F  +PK VPAC      L L +    P+ A  R  +P  R MI+ E+ +L   G I ++ S  AA C  V+K DGT+R+  D+R LN  L S SGG GD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  + +AF   +   +  +   G+ +WLD I I S T   H   L      L    L V+  K
Sbjct:  127 LGTAGSLKKQQLVNVLAAFIEDGLFPLDPKRVPACINGEYELPLINEFCTPFAAKQRRFAPAGRRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGWGDMQTIFDGLKGKKYFTQLDLASGFRQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLAAAFTRRVKSAWGHLS--GVFSWLDDIVIASDTWEEHVATLTLVLNRLLAAGLFVSFAK 364          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 2.550e-35
Identity = 85/201 (42.29%), Postives = 110/201 (54.73%), Query Frame = 0
Query:   40 LELKDPNE--NPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 238
            LEL   NE   P+ A  R  SPE+R MI+ E+ +L   G I ++ S  AA C  V+K DGT+R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  +P+AF   +      +   G+ +WLD I I S +   H   L      L    L VN  K
Sbjct:    5 LELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAK 203          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAQ6_9PHAE4.700e-4440.83Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KBF4_9PHAE4.780e-4240.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQV6_9PHAE5.680e-4239.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFK7_9PHAE1.590e-4139.58Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEH2_9PHAE1.760e-4139.58RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5L7W0_9PHAE2.660e-4043.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGF2_9PHAE7.270e-4040.37Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5J659_9PHAE2.260e-3941.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7I8_9PHAE7.460e-3837.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIS6_9PHAE2.550e-3542.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 41..178
e-value: 2.7E-35
score: 123.6
NoneNo IPR availableGENE3D3.30.70.270coord: 117..238
e-value: 2.7E-35
score: 123.6
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 5..232
NoneNo IPR availablePANTHERPTHR24559:SF269coord: 5..232
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 15..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig767contigH-elongata_contig767:1768..2481 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig767.15338.1mRNA_H-elongata_contig767.15338.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig767 1768..2481 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig767.15338.1 ID=prot_H-elongata_contig767.15338.1|Name=mRNA_H-elongata_contig767.15338.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=238bp
IGNLKPLEKAILQEILEEYVDIFAANPKSVPACEGAPMRLELKDPNENPY
VAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVR
VVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIH
VDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIK
NWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK
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