prot_H-elongata_contig76498.15323.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig76498.15323.1
Unique Nameprot_H-elongata_contig76498.15323.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length229
Homology
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BLAST of mRNA_H-elongata_contig76498.15323.1 vs. uniprot
Match: A0A6H5KNB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNB2_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.170e-30
Identity = 96/247 (38.87%), Postives = 126/247 (51.01%), Query Frame = 0 
Query:    1 AEAGEWRLLLGFARYLVWNDFLFLPQALPDLPRRAKDGDDSLPRKSGSSTAMG--SPGARVSQSKPRRADPEAPAPVLTMGDTKGSQKSQVGQGSRAQHPDNGIVE-RVRVTK--------RSLVAPRWFDPDKDLCAGCWAARTG-----GSKCGRCGRGRRKNLAEARSRRGPAVSAEKGGRKQGQQQGPVTWQEFRKVRSPLELFVFHAAYACVLHPGFSRRELPPGS--GGIGWWDGGSAEEA 229
            AEAGEW LLLGFA +LV +  + LP  LP LPR++     S+   + S   +G  S  A       RR   E  AP L  GD   +Q  Q G  ++ QH  +     R+  T         ++  AP+WF   K LC  CWA RTG     GSKC RCGR   +  +   S+RG  V+A+           PV  Q+F +V+  L+LF+ HAAYACVLHPG +      G   GG+GWW+GG  E+A
Sbjct:  883 AEAGEWLLLLGFAHHLVSDGHVGLPCTLPALPRKS-----SIKGPTSSIKVVGVMSKQANYFLGPVRRKRVEY-APRLE-GDAPAAQCQQQGPVAKEQHGQHHQPSARLYATGPTHQGGQGQATSAPKWFSAHKSLCETCWALRTGASGAGGSKCQRCGRTHVRGFSHESSKRGGDVTAD-----------PVPLQQFSQVKESLDLFIVHAAYACVLHPGPANNATVAGGLGGGLGWWNGGDTEQA 1111
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BLAST of mRNA_H-elongata_contig76498.15323.1 vs. uniprot
Match: D8LN60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN60_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 6.160e-6
Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 0 
Query:  184 KVRSPLELFVFHAAYACVLHPG-FSRRELPPG-SGGIGWWDGGSAEEA 229
            KV+  L+LF+ HAAYACVLHPG  S   +  G  GG+GWW+GG  E+A
Sbjct:  938 KVKESLDLFIVHAAYACVLHPGPLSNAMVAAGLGGGLGWWNGGDTEQA 985
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76498.15323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNB2_9PHAE1.170e-3038.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN60_ECTSI6.160e-656.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76498contigH-elongata_contig76498:210..1792 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76498.15323.1mRNA_H-elongata_contig76498.15323.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig76498 210..1792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig76498.15323.1 ID=prot_H-elongata_contig76498.15323.1|Name=mRNA_H-elongata_contig76498.15323.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp
AEAGEWRLLLGFARYLVWNDFLFLPQALPDLPRRAKDGDDSLPRKSGSST
AMGSPGARVSQSKPRRADPEAPAPVLTMGDTKGSQKSQVGQGSRAQHPDN
GIVERVRVTKRSLVAPRWFDPDKDLCAGCWAARTGGSKCGRCGRGRRKNL
AEARSRRGPAVSAEKGGRKQGQQQGPVTWQEFRKVRSPLELFVFHAAYAC
VLHPGFSRRELPPGSGGIGWWDGGSAEEA
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