prot_H-elongata_contig76497.15322.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig76497.15322.1
Unique Nameprot_H-elongata_contig76497.15322.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
BLAST of mRNA_H-elongata_contig76497.15322.1 vs. uniprot
Match: A0A6H5K487_9PHAE (SPDS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K487_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 8.940e-54
Identity = 84/99 (84.85%), Postives = 92/99 (92.93%), Query Frame = 0
Query:    1 QGNSDYDVIIVDSSDPVGPAETLFQPSFYENMKRALAPGGIIATQGECLWLHLPLITSVMHACVEVFASVDYAFTTVPSYPSGQIGFILASVEERGRST 99
            +GNS YDVIIVDSSDPVGPAETLFQPSFY+NMK+ALAP G+IATQGECLWLHLPLIT+V+ AC E+F SVDYAFTTVPSYPSGQIGF+LASVEER  ST
Sbjct:  150 EGNSGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERDLST 248          
BLAST of mRNA_H-elongata_contig76497.15322.1 vs. uniprot
Match: A0A835ZDK7_9STRA (Spermidine/spermine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK7_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.370e-42
Identity = 67/99 (67.68%), Postives = 81/99 (81.82%), Query Frame = 0
Query:    1 QGNSDYDVIIVDSSDPVGPAETLFQPSFYENMKRALAPGGIIATQGECLWLHLPLITSVMHACVEVFASVDYAFTTVPSYPSGQIGFILASVEERGRST 99
            +GN  YDVIIVDSSDPVGPAETLF+P F+ +MK AL+PGGI+ATQGECLWLHL LI  V+ +C   F S++YAFTT+P+YPSGQIGF++ S  ER  ST
Sbjct:  150 EGNGQYDVIIVDSSDPVGPAETLFKPEFFLSMKNALSPGGIVATQGECLWLHLKLIRGVLESCASTFTSLEYAFTTMPTYPSGQIGFVVGSTAERDLST 248          
BLAST of mRNA_H-elongata_contig76497.15322.1 vs. uniprot
Match: A0A7S2G2V2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2V2_9STRA)

HSP 1 Score: 143 bits (360), Expect = 5.420e-41
Identity = 63/90 (70.00%), Postives = 77/90 (85.56%), Query Frame = 0
Query:    6 YDVIIVDSSDPVGPAETLFQPSFYENMKRALAPGGIIATQGECLWLHLPLITSVMHACVEVFASVDYAFTTVPSYPSGQIGFILASVEER 95
            YDVIIVDSSDPVGPAETLFQP FYE M  AL PGG+I TQGEC+WLHL LITSV+ +C ++F +V+YA+TT+P+YPSGQIGF+L S + +
Sbjct:   57 YDVIIVDSSDPVGPAETLFQPEFYEKMAAALNPGGVICTQGECMWLHLDLITSVLTSCCDIFPTVEYAYTTIPTYPSGQIGFVLCSSDRQ 146          
BLAST of mRNA_H-elongata_contig76497.15322.1 vs. uniprot
Match: A0A7S4A7K5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7K5_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.180e-40
Identity = 66/93 (70.97%), Postives = 79/93 (84.95%), Query Frame = 0
Query:    6 YDVIIVDSSDPVGPAETLFQPSFYENMKRALAPGGIIATQGECLWLHLPLITSVMHACVEVFASVDYAFTTVPSYPSGQIGFILASVEERGRS 98
            YDVIIVDSSDPVGPAETLF P+FY++MK ALAP GI+ TQGECLWLHLPLI  V+ AC   F SV+YA+TTVP+YPSGQIGF+L S+++  R+
Sbjct:  204 YDVIIVDSSDPVGPAETLFAPAFYDSMKAALAPNGIVCTQGECLWLHLPLIAKVVTACRATFPSVEYAYTTVPTYPSGQIGFVLCSLDDGERA 296          
BLAST of mRNA_H-elongata_contig76497.15322.1 vs. uniprot
Match: F0YCA3_AURAN (PABS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCA3_AURAN)

HSP 1 Score: 143 bits (360), Expect = 5.380e-40
Identity = 62/89 (69.66%), Postives = 80/89 (89.89%), Query Frame = 0
Query:    6 YDVIIVDSSDPVGPAETLFQPSFYENMKRALAPGGIIATQGECLWLHLPLITSVMHACVEVFASVDYAFTTVPSYPSGQIGFILASVEE 94
            YDVIIVDSSDPVGPAETLF+P+FY++M+ ALAPGG + TQGEC+WLHLPLI+ V+ AC ++F +V+YA+T VP+YPSGQIGFI+ S++E
Sbjct:  169 YDVIIVDSSDPVGPAETLFEPAFYDSMRAALAPGGAVCTQGECMWLHLPLISKVVSACRDLFPTVEYAYTCVPTYPSGQIGFIMCSLDE 257          
BLAST of mRNA_H-elongata_contig76497.15322.1 vs. uniprot
Match: K3WTM8_GLOUD (PABS domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WTM8_GLOUD)

HSP 1 Score: 137 bits (346), Expect = 6.390e-38
Identity = 61/89 (68.54%), Postives = 74/89 (83.15%), Query Frame = 0
Query:    6 YDVIIVDSSDPVGPAETLFQPSFYENMKRALAPGGIIATQGECLWLHLPLITSVMHACVEVFASVDYAFTTVPSYPSGQIGFILASVEE 94
            +DVIIVDSSDPVGPAE LF+  FYENMK++LAPGGI+ TQGECLWLHL LI  V+  C   F ++ YAFTT+P+YPSGQIGFI+ S++E
Sbjct:  160 FDVIIVDSSDPVGPAEVLFRAEFYENMKKSLAPGGIVCTQGECLWLHLDLIVEVLGRCQNYFPTIQYAFTTIPTYPSGQIGFIVCSLDE 248          
BLAST of mRNA_H-elongata_contig76497.15322.1 vs. uniprot
Match: A0A3M6VRP9_9STRA (PABS domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRP9_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.260e-37
Identity = 59/92 (64.13%), Postives = 77/92 (83.70%), Query Frame = 0
Query:    3 NSDYDVIIVDSSDPVGPAETLFQPSFYENMKRALAPGGIIATQGECLWLHLPLITSVMHACVEVFASVDYAFTTVPSYPSGQIGFILASVEE 94
            N  +DV+IVDSSDPVGPAE L++  FYENMK++L+P GII TQGECLWLHL LI  VM  C  +F+SV+Y++TT+P+YPSGQIGFI+ S+++
Sbjct:  157 NDKFDVVIVDSSDPVGPAEVLYRAEFYENMKKSLSPDGIICTQGECLWLHLDLIVDVMTRCQNLFSSVNYSYTTIPTYPSGQIGFIMCSLDD 248          
BLAST of mRNA_H-elongata_contig76497.15322.1 vs. uniprot
Match: A0A507CCN1_9FUNG (Spermidine synthase n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CCN1_9FUNG)

HSP 1 Score: 134 bits (338), Expect = 9.150e-37
Identity = 61/90 (67.78%), Postives = 75/90 (83.33%), Query Frame = 0
Query:    6 YDVIIVDSSDPVGPAETLFQPSFYENMKRALAPGGIIATQGECLWLHLPLITSVMHACVEVFASVDYAFTTVPSYPSGQIGFILASVEER 95
            YDV+I DSSDPVGPAE+LFQ SF++ +K AL PGGIIATQGEC WLHLPLI +V+  C E++ SV YA+ +VP+YP GQIGFILAS E++
Sbjct:  164 YDVVITDSSDPVGPAESLFQGSFFQLLKNALRPGGIIATQGECQWLHLPLIKTVISQCKEIYPSVSYAYASVPTYPCGQIGFILASTEKK 253          
BLAST of mRNA_H-elongata_contig76497.15322.1 vs. uniprot
Match: A0A8K1FNW5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNW5_PYTOL)

HSP 1 Score: 134 bits (337), Expect = 1.290e-36
Identity = 59/89 (66.29%), Postives = 73/89 (82.02%), Query Frame = 0
Query:    6 YDVIIVDSSDPVGPAETLFQPSFYENMKRALAPGGIIATQGECLWLHLPLITSVMHACVEVFASVDYAFTTVPSYPSGQIGFILASVEE 94
            +DVIIVDSSDPVGPAE LF+  FYENMK +L+PGGI+ TQGECLWLHL LI  V+  C   F +V YAFTT+P+YPSGQIGF++ S+++
Sbjct:  156 FDVIIVDSSDPVGPAEVLFRAEFYENMKNSLSPGGIVCTQGECLWLHLDLIAEVLTRCHAYFPTVQYAFTTIPTYPSGQIGFVMCSLDD 244          
BLAST of mRNA_H-elongata_contig76497.15322.1 vs. uniprot
Match: A0A7S2XU07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XU07_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.090e-36
Identity = 58/89 (65.17%), Postives = 72/89 (80.90%), Query Frame = 0
Query:    1 QGNSDYDVIIVDSSDPVGPAETLFQPSFYENMKRALAPGGIIATQGECLWLHLPLITSVMHACVEVFASVDYAFTTVPSYPSGQIGFIL 89
            +G+  YDVIIVDSSDP GPAE LFQP+F+E+   AL PGGI+ TQGEC WLHL LI+SV+  C  +F  V+YA+TT+P+YPSGQIGFI+
Sbjct:   69 EGHDVYDVIIVDSSDPEGPAEALFQPAFFESAAAALQPGGILCTQGECQWLHLDLISSVVEGCGALFPQVEYAYTTIPTYPSGQIGFII 157          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76497.15322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K487_9PHAE8.940e-5484.85SPDS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A835ZDK7_9STRA2.370e-4267.68Spermidine/spermine synthase n=1 Tax=Tribonema min... [more]
A0A7S2G2V2_9STRA5.420e-4170.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4A7K5_9STRA3.180e-4070.97Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YCA3_AURAN5.380e-4069.66PABS domain-containing protein n=1 Tax=Aureococcus... [more]
K3WTM8_GLOUD6.390e-3868.54PABS domain-containing protein n=2 Tax=Pythiaceae ... [more]
A0A3M6VRP9_9STRA3.260e-3764.13PABS domain-containing protein n=1 Tax=Peronospora... [more]
A0A507CCN1_9FUNG9.150e-3767.78Spermidine synthase n=1 Tax=Synchytrium microbalum... [more]
A0A8K1FNW5_PYTOL1.290e-3666.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2XU07_9STRA3.090e-3665.17Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF01564Spermine_synthcoord: 5..93
e-value: 2.3E-25
score: 89.1
NoneNo IPR availableGENE3D3.40.50.150coord: 1..99
e-value: 3.5E-28
score: 100.6
NoneNo IPR availablePANTHERPTHR11558:SF11SPERMIDINE SYNTHASEcoord: 4..94
NoneNo IPR availablePANTHERPTHR11558SPERMIDINE/SPERMINE SYNTHASEcoord: 4..94
IPR030374Polyamine biosynthesis domainPROSITEPS51006PABS_2coord: 1..92
score: 36.41
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 6..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76497contigH-elongata_contig76497:2261..2799 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76497.15322.1mRNA_H-elongata_contig76497.15322.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig76497 2261..2799 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig76497.15322.1 ID=prot_H-elongata_contig76497.15322.1|Name=mRNA_H-elongata_contig76497.15322.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
QGNSDYDVIIVDSSDPVGPAETLFQPSFYENMKRALAPGGIIATQGECLW
LHLPLITSVMHACVEVFASVDYAFTTVPSYPSGQIGFILASVEERGRSTT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR030374PABS
IPR029063SAM-dependent_MTases